BAC Information

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BAC

Clone NameB6Ng01-050F18
Chromosome4 (Build37)
Map Location 51,048,311 - 51,048,832
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666663, LOC100040979
Downstream geneLOC666681, LOC100040814, LOC384015
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050F18.bB6Ng01-050F18.g
ACCDH874328DH874329
length803881
definitionDH874328|Mus musculus domesticus DNA, BAC clone: B6Ng01-050F18, 5' end.DH874329|Mus musculus domesticus DNA, BAC clone: B6Ng01-050F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcttttcaagacttttaccctgaagggatgctggaatttg
ccaaatgctttatcagcatctaatgagatgatcatatggttcttttcttt
gactttatttatgtagtggattacgttgatggattttcatatattgaact
atccctgcatccctgggacaaagcctacttgatcttggttaatgattatt
ttgagctgttttgggattcagttggtgagagtttaattgaatagttttgc
atcaattacttaagggaaattggtctgaagttctgtttctttgttgggtc
tttgtgtggttttggtaacagtgtatctgtggcttcatagaacaaattgg
gtagtgttccttctctttatattttgtggaatagttggaagagtattgtt
attaggtcttctttgaagctctgctagaattctgcactaaacccttctat
tcttgggctttttttgactgtgagatattatcaactgcttctatttatct
aggggttatgggattgtttagatggtttatctgatcctgatttaactttg
atatttggtatctgcctagaaaattgtccatttaatccagattttttcag
ttttgttgaatataggcttttgtagcaggatctgttgatttttttgaatg
tccttgatttcagttgttattcctcccttttttatttctgattttgttac
taaggatactgtctctaaacctaatagaaaagaaagtgaggaaaagcctt
aaatacatcggtcacagggaaattcctgaaaagaacatcaattgtctatg
ctc
gaattcatgttctttaggcaggccctggacatttctaccactttgagcac
atcaccggagcacagacaacattacataaattaggaaatgaggattcatt
aaatactgagtttgatttggtagatgtacatatccagaacagtgaaaaat
cagtgtatgtcatttagaagttatacacacagggacatgtaagacctcag
cagaagaaatagaaaaggtgtcttttaattacatataagtagattcttta
tagcatgctaaaaggtggatttggaaagggtgaggatacaactttcactt
ttatatcaaatatttttcaaaagaaattacatttcagtaaattattttta
gtataattttgtaccaaataatgcttattttaaaagaaattactattatt
ttgttctttctatgttttctgttcaaattccactcatgtcttcaatatag
tacttctttccacctattgattttaggatactgacctgcagttttctatt
ttgttgttgtttctttccctggttgtgcaatatggcaacactggcttcat
taaaggtgtttgaaaatgatctcaaccacaaaagaaatcacttgatatgc
actcactgataagtggatattagcccagaaacttaaaatacccgagatac
aatttacaaaacttaaaaaaaatcaaaaagaaggaagaccaacatgtgga
tacttcattcctccttagcatagggaacaaaatacacattgaaagagtta
cagagacaaagtttggagctaagacgaaaggatggaccatccagagacta
ccccacccagggatccatcccataatcagccacaaatgtagacactattg
catgtgccagcagattttgctgacaggagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_51048311_51048832
seq2: B6Ng01-050F18.g_66_587 (reverse)

seq1  CCAGGGAAAGAAACAACAACAAAATAGAAAACTGCAGGTCAGTATCCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAAAGAAACAACAACAAAATAGAAAACTGCAGGTCAGTATCCTAA  50

seq1  AATCAATAGGTGGAAAGAAGTACTATATTGAAGACATGAGTGGAATTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATAGGTGGAAAGAAGTACTATATTGAAGACATGAGTGGAATTTGA  100

seq1  ACAGAAAACATAGAAAGAACAAAATAATAGTAATTTCTTTTAAAATAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAACATAGAAAGAACAAAATAATAGTAATTTCTTTTAAAATAAGC  150

seq1  ATTATTTGGTACAAAATTATACTAAAAATAATTTACTGAAATGTAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGGTACAAAATTATACTAAAAATAATTTACTGAAATGTAATTTC  200

seq1  TTTTGAAAAATATTTGATATAAAAGTGAAAGTTGTATCCTCACCCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAATATTTGATATAAAAGTGAAAGTTGTATCCTCACCCTTTCC  250

seq1  AAATCCACCTTTTAGCATGCTATAAAGAATCTACTTATATGTAATTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTTTTAGCATGCTATAAAGAATCTACTTATATGTAATTAAAA  300

seq1  GACACCTTTTCTATTTCTTCTGCTGAGGTCTTACATGTCCCTGTGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTTTTCTATTTCTTCTGCTGAGGTCTTACATGTCCCTGTGTGTAT  350

seq1  AACTTCTAAATGACATACACTGATTTTTCACTGTTCTGGATATGTACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTAAATGACATACACTGATTTTTCACTGTTCTGGATATGTACATC  400

seq1  TACCAAATCAAACTCAGTATTTAATGAATCCTCATTTCCTAATTTATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAATCAAACTCAGTATTTAATGAATCCTCATTTCCTAATTTATGTA  450

seq1  ATGTTGTCTGTGCTCCGGTGATGTGCTCAAAGTGGTAGAAATGTCCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTCTGTGCTCCGGTGATGTGCTCAAAGTGGTAGAAATGTCCAGGG  500

seq1  CCTGCCTAAAGAACATGAATTC  522
      ||||||||||||||||||||||
seq2  CCTGCCTAAAGAACATGAATTC  522