BAC Information

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BAC

Clone NameB6Ng01-050J21
Chromosome4 (Build37)1 (Build37)
Map Location 77,912,035 - 77,912,16684,044,554 - 84,044,605
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050J21.bB6Ng01-050J21.g
ACCDH874507DH874508
length217566
definitionDH874507|Mus musculus domesticus DNA, BAC clone: B6Ng01-050J21, 5' end.DH874508|Mus musculus domesticus DNA, BAC clone: B6Ng01-050J21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(77,912,035 - 77,912,166)(84,044,554 - 84,044,605)
sequence
ctggtgttctggctcttacaatcttttagtcccttttggtgatgtttctg
agtcctagatgtaggagaaatagagatagagatagagatagagatagaga
tagagatagagatagagatagagatagatagagatttagttaaagatagg
gattgatttagagatagatttagaggtggatatatatatatatatataca
tatatatatatatatat
gaattcctcctctcaaaaggaaatgcagggacaaagagtgcggcagaaac
tgaaggaaaggccatccagagattgtcccacctagggatccatcccatct
cctgataccaaacctagaaactattgctgatgccaagaagtgcttactaa
caggagtccagtatagctgagaggctctgccagagttggaccaatacaga
tgtggatgtacacagccaactattggagtgatcaaggggaccccaatcgg
gaagttaggacacggactgtaggagctgaaggagtttacaatctcatagg
aggaacaacaatatcaaccaaccagaccccacccccatcccaaaactccc
aggacctaaaccaccaagcaaagagtacacatggggtatccatggctcca
gttggatatataacagaggattgtcttaactggcatcagtagaaggggag
tcccttggtcctgtggaggcttgatgacccaggatagggaaacactaggc
tactgagacaggagtgggtgggcaatgggggagcaccctcatagaggcgg
gggagggaggagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_77912035_77912166
seq2: B6Ng01-050J21.b_111_269 (reverse)

seq1  ATATATATATATATATATGTATATATATATATATATAT--ACATATATAT  48
      ||||||||||||||||||||||||||||||||||||||  || | || ||
seq2  ATATATATATATATATATGTATATATATATATATATATCCACCTCTAAAT  50

seq1  GTGTGTGTGTGTCTATCTCTATC----------------TCTATCTCTAT  82
       | | | |   || ||| |||||                |||||||||||
seq2  CTATCTCTAAATCAATCCCTATCTTTAACTAAATCTCTATCTATCTCTAT  100

seq1  CTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTACAT  132
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATCTCTATTT  150

seq1  ---------  132
               
seq2  CTCCTACAT  159

seq1: chr1_84044554_84044605
seq2: B6Ng01-050J21.g_581_632

seq1  TGGGTGG---ATGGGGGAGCACCCTCATAGAGGCAAAGGAGAGGGAGGAG  47
      |||||||   ||||||||||||||||||||||||   || ||||||||||
seq2  TGGGTGGGCAATGGGGGAGCACCCTCATAGAGGC--GGGGGAGGGAGGAG  48

seq1  AGGGA  52
       ||||
seq2  -GGGA  52