BAC Information

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BAC

Clone NameB6Ng01-051C16
Chromosome4 (Build37)
Map Location 61,965,873 - 61,966,553
singlet/doubletsinglet
Overlap geneFkbp15
Upstream geneLOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2
Downstream geneSlc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618, Ambp, Kif12, Col27a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051C16.bB6Ng01-051C16.g
ACCDH874890DH874891
length6811,060
definitionDH874890|Mus musculus domesticus DNA, BAC clone: B6Ng01-051C16, 5' end.DH874891|Mus musculus domesticus DNA, BAC clone: B6Ng01-051C16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttagctagcctttctgttaaaagatgtttgtctccctggttg
gtggcccactggaaagagaggagggagatggggatgtaattgagatgtaa
agtaaagaaaaagaaattaaaattttaaaaaaagtgttcattacttaaaa
ccgttttctccacggtggcagatctcagtgctaccagccactcatgcctc
tctgtccttccatagagttctgactcagcaatttgatgtatcccttaatg
ccttgagtttagtagcatgcagttttgatcttggctcaggtcaagaagat
catgaaccaggtgttccagtcactgaggggagagtttgagctggaggaat
cttatgatggagggaccattctgaggaccatcatgcatacaattaaggta
catccagaaagctgtcaggggcttcactggagtgggcactcatacaagtg
atgggaacccctgaaatggcatatgtccacatgggtgtgtccagccagcc
tcttcccacagaagagagagtgagttgggtggcagctgtgcttctgagga
caaggacctgtcagtacatgctgtcttcctgtcagtgtcacctcctcctt
ggcttttgaacagatggtgacgctgcagctgttgaaccatcaggaggaag
aggaggaagaggaagaggaggaggaagagga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaaagcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaatttcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagtttgtacaaccactctggaaatcagtctggcggttccct
tagaaaattggacatagtactaccgggtgatccagcaatacctcttctgg
gcatatatccaaaacatgtcccaaccggtatgaaggacacatgctccact
aagttcatagcagccttatttataatagccagaagctggaaagaagccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtactactcagctattaaaaagaatgaatttatgaaattcctaggc
aaatggatggacctggagggcatcatcctgagtgaggtaacccaatcaca
aaggaactcacacaatatgtactcactgataagtggacattagcccaaaa
cttaggatacccaagatataagatacaatttgccaaatgcatgaaactct
agaagaatgaagaccaaagtgtggacactgtgccccttcttaaaattggg
aaaaaacacccatggaaggacccagatatagctgtctcttgaaagactat
gccaaggcctagcaaacacagaagtggatgctcacagtcagctattggat
gaatcacagggctcccaatggaggagctagagaaagtacccaaggaggta
aagggacctgcaaccctatagatggaataacattatgaactaaccagtac
cccggagctcttgaccctagctacatatgtatcaaaagatggcctagtca
gccatcactggaaagagagcccattggacacataaactttattatgcccc
actacaggggaatgccagggccaaaaaatgaagatgggtggggtagggaa
atgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61965873_61966553
seq2: B6Ng01-051C16.b_47_727 (reverse)

seq1  TCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCTTCCTCCTGATGGTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCTTCCTCCTGATGGTTCAA  50

seq1  CAGCTGCAGCGTCACCATCTGTTCAAAAGCCAAGGAGGAGGTGACACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCAGCGTCACCATCTGTTCAAAAGCCAAGGAGGAGGTGACACTGA  100

seq1  CAGGAAGACAGCATGTACTGACAGGTCCTTGTCCTCAGAAGCACAGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGACAGCATGTACTGACAGGTCCTTGTCCTCAGAAGCACAGCTGC  150

seq1  CACCCAACTCACTCTCTCTTCTGTGGGAAGAGGCTGGCTGGACACACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAACTCACTCTCTCTTCTGTGGGAAGAGGCTGGCTGGACACACCCA  200

seq1  TGTGGACATATGCCATTTCAGGGGTTCCCATCACTTGTATGAGTGCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACATATGCCATTTCAGGGGTTCCCATCACTTGTATGAGTGCCCAC  250

seq1  TCCAGTGAAGCCCCTGACAGCTTTCTGGATGTACCTTAATTGTATGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGAAGCCCCTGACAGCTTTCTGGATGTACCTTAATTGTATGCATG  300

seq1  ATGGTCCTCAGAATGGTCCCTCCATCATAAGATTCCTCCAGCTCAAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCCTCAGAATGGTCCCTCCATCATAAGATTCCTCCAGCTCAAACTC  350

seq1  TCCCCTCAGTGACTGGAACACCTGGTTCATGATCTTCTTGACCTGAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCAGTGACTGGAACACCTGGTTCATGATCTTCTTGACCTGAGCCA  400

seq1  AGATCAAAACTGCATGCTACTAAACTCAAGGCATTAAGGGATACATCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAACTGCATGCTACTAAACTCAAGGCATTAAGGGATACATCAAA  450

seq1  TTGCTGAGTCAGAACTCTATGGAAGGACAGAGAGGCATGAGTGGCTGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGTCAGAACTCTATGGAAGGACAGAGAGGCATGAGTGGCTGGTA  500

seq1  GCACTGAGATCTGCCACCGTGGAGAAAACGGTTTTAAGTAATGAACACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAGATCTGCCACCGTGGAGAAAACGGTTTTAAGTAATGAACACTT  550

seq1  TTTTTAAAATTTTAATTTCTTTTTCTTTACTTTACATCTCAATTACATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAATTTTAATTTCTTTTTCTTTACTTTACATCTCAATTACATCC  600

seq1  CCATCTCCCTCCTCTCTTTCCAGTGGGCCACCAACCAGGGAGACAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCCTCCTCTCTTTCCAGTGGGCCACCAACCAGGGAGACAAACAT  650

seq1  CTTTTAACAGAAAGGCTAGCTAAAAGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  CTTTTAACAGAAAGGCTAGCTAAAAGAATTC  681