BAC Information

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BAC

Clone NameB6Ng01-051F15
Chromosome4 (Build37)
Map Location 148,965,769 - 149,080,428
singlet/doubletdoublet
Overlap geneClstn1, Pik3cd
Upstream geneSrm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1
Downstream geneD4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F15.bB6Ng01-051F15.g
ACCDH875022DH875023
length1,137734
definitionDH875022|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F15, 5' end.DH875023|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,965,769 - 148,966,940)(149,079,695 - 149,080,428)
sequence
gaattccacttccagtggatctggtgccctcttctggtctccagggatac
tgcacacatgtaatgcacagacatacatgcaggagaaacacacataaaaa
ttaaagctgaaaaaaaaatcttctttaagattgaaacgaaccaggcatga
tgatggcatatatacctgtaattagagcactgaggaggttgaagcaggag
gactgccacaagttcgaagccagcctccgccctgcagtgagttccaggcc
agtgctagaaacctgtgtacctcacatactctggttgaggctgcagaaca
ttctagcttgcttttcctgtggtcttgatttggtgggagcagagtttctc
aagaggaattccatctttgccaacagaaatttaagatgtcgattctttaa
aatgcagcttatacagaaaggggggagtgtgtgctgtggactggagatgg
tttatacagtcatgtgcagtagtcatgttctcttcattgtttaaaaaccc
aaacgccacagtgccctttagacacaagcagaggctatggagagtcactg
gtgggagctggtgtgctgtggcagcccctccctgaacacaatctctccaa
gagccatcaccgacgagacactgcactgagatggctggctcagaattgtc
ctggcctttgtctccagcattttagctgtgattttgctcatcttatcatt
tatgatggtattattagagcagacattttcaaaggatccagagctgagtg
ctttaaaaaaaaaaaaaaaggttctcggcaaagattcatgacttcaaagt
aactgaatatatagatatataagtaaaaacctgtaagtgcatctgacggt
cagcttcccttccactcggaaccccagcgggagagcgtggcaggcagtgt
accaaagaatgtctgtgttttctttgtacttttccgtcagtagaggtgga
tattgttcagtcatctgcgtcagacagctccagggccctgatgagtctct
ccagctctctgttgaccattctcatctcatgctgtaagaaacagtagctt
acgactcgcgttgagtcaaaaaaggcatggctttcatatcattttaaata
attacttcgtatgatctgtgctggagcccagccctgt
gaattcactcagagatccacttgcctctgcctccctagtgcggggattga
aggtgcgtgctgtcatgcctggctagagaagtttcttgtacaaaagaaat
ctgaataattcctgtgatatgcgttggcctcagagagcctaactgtgtga
gtgcgtgcgtgcgtgtgtatgtgtgtgtgcgcgtgtgtgcctgcatgctt
gtggcaggggtgggggaaggacctagtgacttccttatagaaactacagt
agaggcaaaatacaaagaacatgcaaaagaataataaaaattagagagag
aaaaaaagaaaaaacagatagagataagaaaggaaggaaaataaataaag
gaaaacagaaatagaaatcttggccaggagccttgatgcacacctttaat
ctcagcagttgggaggccagcctcgtctcagagtgagttccaggacagcc
agggctacacagagaaaccctgtcacaataaacaaacaaacatataaact
tttttcttttagaaaaaaaaaaggaaagaaggaagaaaaggagtcaggga
ggaagaaaggctaagccctcctcccccaggtcagtgaatcctctgaccgt
gctcctcccccaggtcagtgaatcctctgaccgtgctcctcccccaggtc
agtgaatcctctgaccgtgctccttccagggccttgcaagagccatggct
gaagcaatctgggctctgatcgaattggggttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_148965769_148966940
seq2: B6Ng01-051F15.b_45_1181

seq1  GAATTCCACTTCCAGTGGATCTGGTGCCCTCTTCTGGTCTCCAGGGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTCCAGTGGATCTGGTGCCCTCTTCTGGTCTCCAGGGATAC  50

seq1  TGCACACATGTAATGCACAGACATACATGCAGGAGAAACACACATAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACATGTAATGCACAGACATACATGCAGGAGAAACACACATAAAAA  100

seq1  TTAAAGCTGAAAAAAAAATCTTCTTTAAGATTGAAACGAACCAGGCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTGAAAAAAAAATCTTCTTTAAGATTGAAACGAACCAGGCATGA  150

seq1  TGATGGCATATATACCTGTAATTAGAGCACTGAGGAGGTTGAAGCAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCATATATACCTGTAATTAGAGCACTGAGGAGGTTGAAGCAGGAG  200

seq1  GACTGCCACAAGTTCGAAGCCAGCCTCCGCCCTGCAGTGAGTTCCAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCACAAGTTCGAAGCCAGCCTCCGCCCTGCAGTGAGTTCCAGGCC  250

seq1  AGTGCTAGAAACCTGTGTACCTCACATACTCTGGTTGAGGCTGCAGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAGAAACCTGTGTACCTCACATACTCTGGTTGAGGCTGCAGAACA  300

seq1  TTCTAGCTTGCTTTTCCTGTGGTCTTGATTTGGTGGGAGCAGAGTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCTTGCTTTTCCTGTGGTCTTGATTTGGTGGGAGCAGAGTTTCTC  350

seq1  AAGAGGAATTCCATCTTTGCCAACAGAAATTTAAGATGTCGATTCTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAATTCCATCTTTGCCAACAGAAATTTAAGATGTCGATTCTTTAA  400

seq1  AATGCAGCTTATACAGAAAGGGGGGAGTGTGTGCTGTGGACTGGAGATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCTTATACAGAAAGGGGGGAGTGTGTGCTGTGGACTGGAGATGG  450

seq1  TTTATACAGTCATGTGCAGTAGTCATGTTCTCTTCATTGTTTAAAAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACAGTCATGTGCAGTAGTCATGTTCTCTTCATTGTTTAAAAACCC  500

seq1  AAACGCCACAGTGCCCTTTAGACACAAGCAGAGGCTATGGAGAGTCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCCACAGTGCCCTTTAGACACAAGCAGAGGCTATGGAGAGTCACTG  550

seq1  GTGGGAGCTGGTGTGCTGTGGCAGCCCCTCCCTGAACACAATCTCTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGCTGGTGTGCTGTGGCAGCCCCTCCCTGAACACAATCTCTCCAA  600

seq1  GAGCCATCACCGACGAGACACTGCACTGAGATGGCTGGCTCAGAATTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCACCGACGAGACACTGCACTGAGATGGCTGGCTCAGAATTGTC  650

seq1  CTGGCCTTTGTCTCCAGCATTTTAGCTGTGATTTTGCTCATCTTATCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTTGTCTCCAGCATTTTAGCTGTGATTTTGCTCATCTTATCATT  700

seq1  TATGATGGTATTATTAGAGCAGACATTTTCAAAGGATCCAGAGCTGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGGTATTATTAGAGCAGACATTTTCAAAGGATCCAGAGCTGAGTG  750

seq1  CTTTAAAAAAAAAAAAAAAGGTTCTCGGCAAAGATTCAATGACTTCAAAG  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTTAAAAAAAAAAAAAAAGGTTCTCGGCAAAGATTC-ATGACTTCAAAG  799

seq1  TAACTGAATATATAGATATATAAGTAAAAACCTGTAAGTGCATCTGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAACTGAATATATAGATATATAAGTAAAAACCTGTAAGTGCATCTGACGG  849

seq1  TCAGCTT-CCTTCCACTCGGAACCCCAGCGGGAAGAGCGTGGCAGGCAGT  899
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  TCAGCTTCCCTTCCACTCGGAACCCCAGCGGG-AGAGCGTGGCAGGCAGT  898

seq1  GTACCAAAAGAAGGTCTGTGTTTTCCTTTGTACCTTTTCCGTCAGTCAGA  949
      ||||| |||||| ||||||||||| ||||||| ||||||||||||| |||
seq2  GTACC-AAAGAATGTCTGTGTTTT-CTTTGTA-CTTTTCCGTCAGT-AGA  944

seq1  GGTGGATATTGTCTCAGTCATCTGCCTCAGGTCAGCTCCCAAGGGCCCCT  999
      |||||||||||| |||||||||||| ||| | |||||||  |||| ||||
seq2  GGTGGATATTGT-TCAGTCATCTGCGTCA-GACAGCTCC--AGGG-CCCT  989

seq1  GTTGAGTCTCCTCCCAGCTTCTCTGTTTAACCCATTCTCCATCTCATGCG  1049
      | ||||||||   ||||| |||||||| |  ||||||| |||||||||| 
seq2  GATGAGTCTC--TCCAGC-TCTCTGTTGA--CCATTCT-CATCTCATGC-  1032

seq1  TGTTAGGTAAACAGTCAGCTTCCGAACTCGCTGTTGAGGTCAAAAGAAAG  1099
      ||| ||  ||||||| ||||| || |||||| ||||| ||||||  ||||
seq2  TGTAAG--AAACAGT-AGCTTACG-ACTCGC-GTTGA-GTCAAA--AAAG  1074

seq1  CCAGTGCTTCCCATATCCATGTTAAAAAATAATTACCTCGTAATGACGTT  1149
       ||  ||||  ||||| ||| ||   |||||||||| |||| ||||   |
seq2  GCATGGCTT-TCATAT-CATTTT---AAATAATTACTTCGT-ATGA-TCT  1117

seq1  GTAGCTGGAGCCCAGGGCCCTGT  1172
      || |||||||||||  |||||||
seq2  GT-GCTGGAGCCCA--GCCCTGT  1137

seq1: chr4_149079695_149080428
seq2: B6Ng01-051F15.g_67_800 (reverse)

seq1  GCAA-CCCAATTCGATCAGAGCCCAGATTGCTTCAGCCATGGCTCTTGCA  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCCAATTCGATCAGAGCCCAGATTGCTTCAGCCATGGCTCTTGCA  50

seq1  AGGCCCTGGAAGGAGCACGGTCAGAGGATTCACTGACCTGGGGGAGGAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGGAAGGAGCACGGTCAGAGGATTCACTGACCTGGGGGAGGAGC  100

seq1  ACGGTCAGAGGATTCACTGACCTGGGGGAGGAGCACGGTCAGAGGATTCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCAGAGGATTCACTGACCTGGGGGAGGAGCACGGTCAGAGGATTCA  150

seq1  CTGACCTGGGGGAGGAGGGCTTAGCCTTTCTTCCTCCCTGACTCCTTTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGGGGGAGGAGGGCTTAGCCTTTCTTCCTCCCTGACTCCTTTTC  200

seq1  TTCCTTCTTTCCTTTTTTTTTTCTTAAAAGAAAAAAGTTTATATGTTTGT  249
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCCTTCTTTCCTTTTTTTTTTC-TAAAAGAAAAAAGTTTATATGTTTGT  249

seq1  TTGTTTATTGTGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTGTGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACT  299

seq1  CACTCTGAGACGAGGCTGGCCTCCCAACTGCTGAGATTAAAGGTGTGCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGAGACGAGGCTGGCCTCCCAACTGCTGAGATTAAAGGTGTGCAT  349

seq1  CAAGGCTCCTGGCCAAGATTTCTATTTCTGTTTTCCTTTATTTATTTTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCCTGGCCAAGATTTCTATTTCTGTTTTCCTTTATTTATTTTCC  399

seq1  TTCCTTTCTTATCTCTATCTGTTTTTTCTTTTTTTCTCTCTCTAATTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTTATCTCTATCTGTTTTTTCTTTTTTTCTCTCTCTAATTTTT  449

seq1  ATTATTCTTTTGCATGTTCTTTGTATTTTGCCTCTACTGTAGTTTCTATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTTTGCATGTTCTTTGTATTTTGCCTCTACTGTAGTTTCTATA  499

seq1  AGGAAGTCACTAGGTCCTTCCCCCACCCCTGCCACAAGCATGCAGGCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCACTAGGTCCTTCCCCCACCCCTGCCACAAGCATGCAGGCACA  549

seq1  CACGCGCACACACACATACACACGCACGCACGCACTCACACAGTTAGGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCGCACACACACATACACACGCACGCACGCACTCACACAGTTAGGCT  599

seq1  CTCTGAGGCCAACGCATATCACAGGAATTATTCAGATTTCTTTTGTACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGCCAACGCATATCACAGGAATTATTCAGATTTCTTTTGTACAA  649

seq1  GAAACTTCTCTAGCCAGGCATGACAGCACGCACCTTCAATCCCCGCACTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTCTCTAGCCAGGCATGACAGCACGCACCTTCAATCCCCGCACTA  699

seq1  GGGAGGCAGAGGCAAGTGGATCTCTGAGTGAATTC  734
      |||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAAGTGGATCTCTGAGTGAATTC  734