BAC Information

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BAC

Clone NameB6Ng01-051J13
Chromosome4 (Build37)
Map Location 147,160,410 - 147,161,032
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010694, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051J13.bB6Ng01-051J13.g
ACCDH875188DH875189
length1,248624
definitionDH875188|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J13, 5' end.DH875189|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacaggagagaaaccgtaccaatgcagtgagtgtgacaaatgc
tttactgacaaaggcagtcttagagttcatcatagaattcatgcaggaga
gaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaaggct
atctgagagttcatcatagaattcatgcaggagagaaaccttacaaatgt
agtgaatgtgacaaatgctttactcacaaaggctctctgagagttcatca
tagaattcatgcaggagagaaaccttacaaatgtagtgaatgtgacaaat
gttttactgagaaaaacagtctgagaaggcatcagagaattcatacagga
gagaaaccttataaatgcagtgaatgtgacaaatgctttacccgaaaatc
acatcttagtattcatcagagaattcatacaggagagaaactgtacaaat
gcagtgaatgtgacaaatgctttacccaacaatgccatcttagtattcat
cagaaaattcattcaggagagaaccttacaaatgcaatgaatgcgacaaa
tgctttagtgacaaacacagtctgagaaggcatcagagaattcatacagg
agagacaccttacaaatgtaatgaatgtgacaaatgctttacctgaaaat
cacatcttagtattcatcagataattcatacaggagagaaaccttacaaa
tgtaatgaatgtgacaaatcctttactgaaaatggctgtctgagaattca
tcagagaattcatacaggagagaaaccttacaaatgtaatgaatgtgaca
aatgctttacctgaaaatcacatcttagtattcatcagataattcataca
gaagagaaaccttacaaatgtagtgaatgtgacaaatcctttactgaaaa
tggctgtctgagaattcatcagagaattcatacaggagagaaaccttaca
aatgtagtgaatgtgacaaatgctttactaaaaatccagtttgaggattc
atcagagatttcatacaggagagaaacttacaaatgtaagtgaatgtgac
aaatgttttatcaaaaatgcagtctgataatcatcagagatcatacagga
aagaaacttacatgtaggaatgtgacaagccttacttgaaaagtcatctg
gaaggcatcgagaactcattacaggggaattctcaatgtatgaaggcaaa
gttgcaatcatcttgctttagccggaaattctactcttagagaggact
gaattcaccatgaatttcttgttttgaaagaaaaccctcatccatatatc
agggtctcaaatgttctcagaacaatgcatggggatagaactcctgcctc
agtcctgaaggtttccagaacagagaaactgacattcatgccactgatga
aaaggaagaacctaagggattttatttgcggttcccataaatgggaagga
agtctaccaatggccagatgagacacaggtgtaaattcataagaaaggga
aaaattttggaaggaggaaagtggatgttggactcagttgttttgtgctt
agtgagggacttccatggtagttaggccatggctctgtgcccacatggtt
ggcccaatggaggaatgtcatgggtgtgtgtgtagggtagtccttgttgt
ggattgccctggtgctgtttgtattttgatgctaattgtgcttcctcaaa
aagagctgccccaaggaggagtggatcgcatactctggtgatttaatgtg
aaacttctccccatttaatttgctcaaattggtcaaataaagactgaagc
ctgtgattgggcagtggaaggaaaacgtgggactggaggttttagaaagg
gagaagaggggaaggaggataggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147160410_147161032
seq2: B6Ng01-051J13.g_70_692

seq1  AATTCACCATGAATTTCTTGTTTTGAAAGAAAACCCTCATCCATATATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACCATGAATTTCTTGTTTTGAAAGAAAACCCTCATCCATATATCA  50

seq1  GGGTCTCAAATGTTCTCAGAACAATGCATGGGGATAGAACTCCTGCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAAATGTTCTCAGAACAATGCATGGGGATAGAACTCCTGCCTCA  100

seq1  GTCCTGAAGGTTTCCAGAACAGAGAAACTGACATTCATGCCACTGATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAAGGTTTCCAGAACAGAGAAACTGACATTCATGCCACTGATGAA  150

seq1  AAGGAAGAACCTAAGGGATTTTATTTGCGGTTCGAATAAATGGGAAGGAA  200
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AAGGAAGAACCTAAGGGATTTTATTTGCGGTTCCCATAAATGGGAAGGAA  200

seq1  GTCTACCAATGGCCAGATGAGACACAGGTGTAAATTCATAAGAAAGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACCAATGGCCAGATGAGACACAGGTGTAAATTCATAAGAAAGGGAA  250

seq1  AAATTTTGGAAGGAGGAAAGTGGATGTTGGACTCAGTTGTTTTGTGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGGAAGGAGGAAAGTGGATGTTGGACTCAGTTGTTTTGTGCTTA  300

seq1  GTGAGGGACTTCCATGGTAGTTAGGCCATGGCTCTGTGCCCACATGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGACTTCCATGGTAGTTAGGCCATGGCTCTGTGCCCACATGGTTG  350

seq1  GCCCAATGGAGGAATGTCATGGGTGTGTGTGTAGGGTAGTCCTTGTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATGGAGGAATGTCATGGGTGTGTGTGTAGGGTAGTCCTTGTTGTG  400

seq1  GATTGCCCTGGTGCTGTTTGTATTTTGATGCTAATTGTGCTTCCTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCCTGGTGCTGTTTGTATTTTGATGCTAATTGTGCTTCCTCAAAA  450

seq1  AGAGCTGCCCCAAGGAGGAGTGGATCGCATACTCTGGTGATTTAATGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGCCCCAAGGAGGAGTGGATCGCATACTCTGGTGATTTAATGTGA  500

seq1  AACTTCTCCCCATTTAAATTGCTCAAATTGGTCAAATAAAGACTGAAGCC  550
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACTTCTCCCCATTTAATTTGCTCAAATTGGTCAAATAAAGACTGAAGCC  550

seq1  TGTGATTGGGCAGTGGAAGGAAAACATGGGGCTGGAGGTTTTAGAAAGGG  600
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  TGTGATTGGGCAGTGGAAGGAAAACGTGGGACTGGAGGTTTTAGAAAGGG  600

seq1  AGAAGAGGGGAAGGAGGAGAGGT  623
      |||||||||||||||||| ||||
seq2  AGAAGAGGGGAAGGAGGATAGGT  623