BAC Information

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BAC

Clone NameB6Ng01-051M03
Chromosome4 (Build37)
Map Location 10,574,700 - 10,721,822
singlet/doubletdoublet
Overlap gene1700123O12Rik
Upstream geneAsph, Gdf6, 4930448K20Rik, LOC666840
Downstream geneLOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem, Cdh17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M03.bB6Ng01-051M03.g
ACCDH875305DH875306
length5641,155
definitionDH875305|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M03, 5' end.DH875306|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,574,700 - 10,575,269)(10,720,640 - 10,721,822)
sequence
caaaaaggacctgtttgatattttcaataaagaactatatgttgtttccc
tagccataggtaaaggaaaagaacaatagaaagagaccggaagagaagga
agaaagaaaagagagaacaggggtctgaggggggtaaagggaaagcagtg
gtggaagggagagaagtgtgggcagggagaagacaggtagctcagatgtc
ctcctggtgccaattccaaccctccatagccaatcttcttgtccaagtcc
ttccccctttgtctttatgcagacaacacatgccttgctttctgatggca
gtccagcctctcctcactatctgaaccactaaagttttatctacctgatc
agatttcattaaaagactctgagcaagcccttttagaaactggttccagg
aacaggctctgctggacttcttatcgctcttatcacagaattaaggacct
agggaagagagcaaggagggggatgatggagaaggaattttgagaatttg
ctaaatagtgaaacttttcacactcttccagcctctccttaaaggtttgc
tttatatcaaaact
gaattccagatgttgctctgtggagtgcttcagggccttacacattatat
ttctgagcaaataaatgtatttccccccttgtgactgaaaggctaaatgg
caggtcatgtgtacctgtgcatgtgaaagggcgtttatattttgatcagg
tgaaatgcacctgggtgccgtaaatattgcagattggtgtgatgtcattg
atccaaaagtctaagggcttggaaggctagcttggctctaggacctctct
ttttcctttcccacccatcttttgctctttgagatgtggagaagagaacc
ttaagtgctgagatttcatgagggcttgcgatctcaaatgactctcctga
ctccccaccttggagagggtggactttccataatgcactctgatccctgt
gctcggtatggatgtgggactttccctaaggtttcacattattgaaagaa
gggcgataagctggggggatactgctggtctctttcactttcacacctcc
ttcaggttggagaacacctgagaagttgggggcagagaggccacggtagc
ttgcttcctgtgaactctttgaagtatcatcttcatctgccttcagtgtg
gtagggagcctggagttttggtacaagctcaattcatagaaagcctatgg
catatgtacacagacacatacatgttatgtaaacgtagctttattaataa
caaggctgatactttaatctctatcaacaagcctctgcgtgacattctcg
caagtagttcagagcatagaatctatgccatatgcagaccaagtttatca
ctaaaccaatatatactcatgagaaaaaaaaaccaaccagaaactagaaa
aagtacaaagaaaaaagtaagttatccatattatgttgggataatcctct
taactttttgtgtattgtaatcttcaagtttctctctactggtttcctgc
cctctatgcacagatatatgcccatcttataaacagtgttaaacatatgt
atagtaaaaatacatgtacccacacaatatttcttactcttctctaagcc
catttttggttacacttttatttttacttgtactacacagcataaagttg
cctgactgactggcctatgtacaagtctgctgaatcccagccttagacga
ctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_10574700_10575269
seq2: B6Ng01-051M03.b_49_618

seq1  GAATTCCAAAAAGGACCTGTTTGATATTTTCAATAAAGAACTATATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAAGGACCTGTTTGATATTTTCAATAAAGAACTATATGTTG  50

seq1  TTTCCCTAGCCATAGGTAAAGGAAAAGAACAATAGAAAGAGACCGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTAGCCATAGGTAAAGGAAAAGAACAATAGAAAGAGACCGGAAGA  100

seq1  GAAGGAAGAAAGAAAAGAGAGAACAGGGGTCTGAGGGGGGTAAAGGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGAAAGAAAAGAGAGAACAGGGGTCTGAGGGGGGTAAAGGGAAA  150

seq1  GCAGTGGTGGAAGGGAGAGAAGTGTGGGCAGGGAGAAGACAGGTAGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGTGGAAGGGAGAGAAGTGTGGGCAGGGAGAAGACAGGTAGCTCA  200

seq1  GATGTCCTCCTGGTGCCAATTCCAACCCTCCATAGCCAATCTTCTTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCTCCTGGTGCCAATTCCAACCCTCCATAGCCAATCTTCTTGTCC  250

seq1  AAGTCCTTCCCCCTTTGTCTTTATGCAGACAACACATGCCTTGCTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTCCCCCTTTGTCTTTATGCAGACAACACATGCCTTGCTTTCTG  300

seq1  ATGGCAGTCCAGCCTCTCCTCACTATCTGAACCACTAAAGTTTTATCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGTCCAGCCTCTCCTCACTATCTGAACCACTAAAGTTTTATCTAC  350

seq1  CTGATCAGATTTCATTAAAAGACTCTGAGCAAGCCCTTTTAGAAACTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAGATTTCATTAAAAGACTCTGAGCAAGCCCTTTTAGAAACTGGT  400

seq1  TCCAGGAACAGGCTCTGCTGGACTTCTTATCGCTCTTATCACAGAATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAACAGGCTCTGCTGGACTTCTTATCGCTCTTATCACAGAATTAA  450

seq1  GGACCTAGGGAAGAGAGCAAGGAGGGGGATGATGGAGAAGGAATTTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAGGGAAGAGAGCAAGGAGGGGGATGATGGAGAAGGAATTTTGAG  500

seq1  AATTTGCCAAATAGTGAAACTTTTCACACTCTTCCAGCCTCTCCACAAAG  550
      ||||||| ||||||||||||||||||||||||||||||||||||  ||||
seq2  AATTTGCTAAATAGTGAAACTTTTCACACTCTTCCAGCCTCTCCTTAAAG  550

seq1  GGTTGCTTTAAATCAAAACT  570
      | |||||||| |||||||||
seq2  GTTTGCTTTATATCAAAACT  570

seq1: chr4_10720640_10721822
seq2: B6Ng01-051M03.g_66_1220 (reverse)

seq1  AGCAGTTCCTGTCTAAGGACCTGAGGAAATCAGCAGACCTGTACATAGAG  50
      ||||||    ||||||||  ||  || | ||||||||| |||||||  ||
seq2  AGCAGT---CGTCTAAGG--CT--GGGATTCAGCAGACTTGTACAT--AG  41

seq1  CCCAGTTCAGTCATGTCCACCTTTATGCTGTGTAGTACAGTAAAAAATAA  100
       |||| ||||||| |  || |||||||||||||||||||   |||||| |
seq2  GCCAG-TCAGTCAGG--CAACTTTATGCTGTGTAGTACAAGTAAAAAT-A  87

seq1  AAAGTGTAACCAAAAATGGGCTTAGAGAAGAGGTAAAGAAATA-TGTGTG  149
      ||||||||||||||||||||||||||||||||   |||||||| ||||||
seq2  AAAGTGTAACCAAAAATGGGCTTAGAGAAGAG--TAAGAAATATTGTGTG  135

seq1  GGTACATGTATGTTTACTATACATATGTTTTAACACTTGTTTATAAGATT  199
      ||||||||||| ||||||||||||||| |||||||| ||||||||||| |
seq2  GGTACATGTATTTTTACTATACATATG-TTTAACAC-TGTTTATAAGA-T  182

seq1  GGGCATATATTCTTGTGCATAGAGGGCAGGGAAACCAGGTAGAGAGGAAA  249
      ||||||||||   ||||||||||||||| |||||||| ||||||| ||||
seq2  GGGCATATAT--CTGTGCATAGAGGGCA-GGAAACCA-GTAGAGA-GAAA  227

seq1  CTTGAAAGATTAACAATAACAACAAAAAAGTTAAGAGGATTATCCCAACA  299
      |||| |||||| ||||| |||   ||||||||||||||||||||||||||
seq2  CTTG-AAGATT-ACAAT-ACA--CAAAAAGTTAAGAGGATTATCCCAACA  272

seq1  TAAATATGGATAACTTACTTTTTTCTTTGTACTTTTTCTAGTTTCTGGTT  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AATATGGATAACTTACTTTTTTCTTTGTACTTTTTCTAGTTTCTGGTT  321

seq1  GGTTTTTTTTTCTCATGAGTATATATTGGTTTAGTGATAAACTTGGTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTCTCATGAGTATATATTGGTTTAGTGATAAACTTGGTCTG  371

seq1  CATATGGCATAGATTCTATGCTCTGAACTACTTGCGAGAATGTCACGCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGCATAGATTCTATGCTCTGAACTACTTGCGAGAATGTCACGCAG  421

seq1  AGGCTTGTTGATAGAGATTAAAGTATCAGCCTTGTTATTAATAAAGCTAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTTGATAGAGATTAAAGTATCAGCCTTGTTATTAATAAAGCTAC  471

seq1  GTTTACATAACATGTATGTGTCTGTGTACATATGCCATAGGCTTTCTATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACATAACATGTATGTGTCTGTGTACATATGCCATAGGCTTTCTATG  521

seq1  AATTGAGCTTGTACCAAAACTCCAGGCTCCCTACCACACTGAAGGCAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGCTTGTACCAAAACTCCAGGCTCCCTACCACACTGAAGGCAGAT  571

seq1  GAAGATGATACTTCAAAGAGTTCACAGGAAGCAAGCTACCGTGGCCTCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGATACTTCAAAGAGTTCACAGGAAGCAAGCTACCGTGGCCTCTC  621

seq1  TGCCCCCAACTTCTCAGGTGTTCTCCAACCTGAAGGAGGTGTGAAAGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAACTTCTCAGGTGTTCTCCAACCTGAAGGAGGTGTGAAAGTGA  671

seq1  AAGAGACCAGCAGTATCCCCCCAGCTTATCGCCCTTCTTTCAATAATGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACCAGCAGTATCCCCCCAGCTTATCGCCCTTCTTTCAATAATGTG  721

seq1  AAACCTTAGGGAAAGTCCCACATCCATACCGAGCACAGGGATCAGAGTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTAGGGAAAGTCCCACATCCATACCGAGCACAGGGATCAGAGTGC  771

seq1  ATTATGGAAAGTCCACCCTCTCCAAGGTGGGGAGTCAGGAGAGTCATTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGAAAGTCCACCCTCTCCAAGGTGGGGAGTCAGGAGAGTCATTTG  821

seq1  AGATCGCAAGCCCTCATGAAATCTCAGCACTTAAGGTTCTCTTCTCCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGCAAGCCCTCATGAAATCTCAGCACTTAAGGTTCTCTTCTCCACA  871

seq1  TCTCAAAGAGCAAAAGATGGGTGGGAAAGGAAAAAGAGAGGTCCTAGAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGAGCAAAAGATGGGTGGGAAAGGAAAAAGAGAGGTCCTAGAGC  921

seq1  CAAGCTAGCCTTCCAAGCCCTTAGACTTTTGGATCAATGACATCACACCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGCCTTCCAAGCCCTTAGACTTTTGGATCAATGACATCACACCA  971

seq1  ATCTGCAATATTTACGGCACCCAGGTGCATTTCACCTGATCAAAATATAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAATATTTACGGCACCCAGGTGCATTTCACCTGATCAAAATATAA  1021

seq1  ACGCCCTTTCACATGCACAGGTACACATGACCTGCCATTTAGCCTTTCAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCTTTCACATGCACAGGTACACATGACCTGCCATTTAGCCTTTCAG  1071

seq1  TCACAAGGGGGGAAATACATTTATTTGCTCAGAAATATAATGTGTAAGGC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGGGGGGAAATACATTTATTTGCTCAGAAATATAATGTGTAAGGC  1121

seq1  CCTGAAGCACTCCACAGAGCAACATCTGGAATTC  1183
      ||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCACTCCACAGAGCAACATCTGGAATTC  1155