BAC Information

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BAC

Clone NameB6Ng01-051M11
Chromosome4 (Build37)
Map Location 95,982,416 - 95,983,483
singlet/doubletsinglet
Overlap geneCyp2j11
Upstream gene2310009E04Rik, Hook1, Cyp2j13, LOC242546, LOC546837
Downstream geneLOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M11.bB6Ng01-051M11.g
ACCDH875319DH875320
length1,0611,166
definitionDH875319|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M11, 5' end.DH875320|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaagagaatttaaaacatattaggaagtactatctgagaagat
tcttctgaaaggataagaaattgaaatagtacttttttgatagatggaat
gcccaaaccctacttagaggtaagattaaggacagcaccaatggagaaag
tatagtgtagagaggaaccttgcagaatgtgtgtggttgagtctggacag
cagatgtaatgtcaagaggatggtaggcatcacaccaaggcatcttagtg
atatccatggctcaataggaagaagagactgagtggattttcatgaaaca
ttgtcactctttgttggaacccttcacacggacagctggcttctctactt
aatcccagaattgcagctccttaaattcatagactataaagtctgtaccc
atgattcatcacaatccttatatgccatgtgaaggccatgcctgctctcc
aaaactcctcaactcacagctatttcctgtcttccattccactgttctat
cttgtggcatgatctaaataaaaacattcagacacaccattctgcctttt
ccaggtacatctagcatcactcaccttgcacttctgggttaacagttata
tagaggagagcccagcgcagtgtgttagatgttgtctctgttccagcaaa
gaagaggtccagagcagtgcagatgagattttcttcattaaaacttgtag
tagtcttgtctgggtactataaagacattgcattttttttcaaggatttc
ctcagtaattgattgattgattgattcttttcttatactcattttgattg
cagtttccccttcctccaatgttatcagtctccaccctcatcccagtctc
ccccagatccacttctcctcagtttcccttcaaaaaagaacagtactcct
agggctaccatctgaatttgacaaagaagttacagtaaggctaagtacaa
gccctcatatctgcccttgatggtggctagtagtagaagaaaattgtcaa
gatcagctctcaatatcagaggaactccaacttctacctttaggattcca
caaaacacaaa
gaattctcatcagaggaataacgaaagactgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaagactcctccattgttggtg
ggattgcaggcttgtacaacaactctggaaatcagtctggcggttctcag
aaaattggacatagtactactggaggatcccgcaatacctctcctgggca
tacatccagaagatgtcccaaccggtaagaaggactcatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
tccctcaacagaggaatggatacaaaaaatatggtacattcacacaatgg
agtactactcagctattaaaaagaatgaattcacgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgatgtaacccaatcacaaaa
gaactcaaatgaaatgcactcactgataaatggatattaacccagaaact
tagtatagcgagatataaggtacaatatgtaaaacatatgaaactgaaga
agaaagaagaccaaagtgtggacactttgctcattcttagaattggaaac
aatcacccatggaaggagttacagagacaaagtttggagctgagacaaaa
ggatggtccatctagagactgccatatccagggatccatcccataattag
cctccaagcgatgacaacattgcatacactagcaagccttgttgcaagga
cggtgatatagctgtcccttgtgagactaggctggggcctagcaaacaca
gaagtagatgctcacagtcaactattggatggatcacagggccccaatgg
aggagctagagaagtatccaaggagctaagagatttgcaccctatcggag
gtacaacattatgaaataactagtacccagagctctgactcttagcttgc
atatgtatcaaaagatgacctagtcgcatcactggaagaaagtccattgg
tcaagcagcgtttatgccatacagggaatgccaggcaaaaatggatgggt
tgtttaagaagtgcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95982416_95983483
seq2: B6Ng01-051M11.b_43_1103

seq1  GAATTCTTAAGAGAATTTAAAACATATTAGGAAGTACTATCTGAGAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGAGAATTTAAAACATATTAGGAAGTACTATCTGAGAAGAT  50

seq1  TCTTCTGAAAGGATAAGAAATTGAAATAGTACTTTTTTGATAGATGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGAAAGGATAAGAAATTGAAATAGTACTTTTTTGATAGATGGAAT  100

seq1  GCCCAAACCCTACTTAGAGGTAAGATTAAGGACAGCACCAATGGAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAACCCTACTTAGAGGTAAGATTAAGGACAGCACCAATGGAGAAAG  150

seq1  TATAGTGTAGAGAGGAACCTTGCAGAATGTGTGTGGTTGAGTCTGGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGTAGAGAGGAACCTTGCAGAATGTGTGTGGTTGAGTCTGGACAG  200

seq1  CAGATGTAATGTCAAGAGGATGGTAGGCATCACACCAAGGCATCTTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTAATGTCAAGAGGATGGTAGGCATCACACCAAGGCATCTTAGTG  250

seq1  ATATCCATGGCTCAATAGGAAGAAGAGACTGAGTGGATTTTCATGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATGGCTCAATAGGAAGAAGAGACTGAGTGGATTTTCATGAAACA  300

seq1  TTGTCACTCTTTGTTGGAACCCTTCACACGGACAGCTGGCTTCTCTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTCTTTGTTGGAACCCTTCACACGGACAGCTGGCTTCTCTACTT  350

seq1  AATCCCAGAATTGCAGCTCCTTAAATTCATAGACTATAAAGTCTGTACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGAATTGCAGCTCCTTAAATTCATAGACTATAAAGTCTGTACCC  400

seq1  ATGATTCATCACAATCCTTATATGCCATGTGAAGGCCATGCCTGCTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCATCACAATCCTTATATGCCATGTGAAGGCCATGCCTGCTCTCC  450

seq1  AAAACTCCTCAACTCACAGCTATTTCCTGTCTTCCATTCCACTGTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCTCAACTCACAGCTATTTCCTGTCTTCCATTCCACTGTTCTAT  500

seq1  CTTGTGGCATGATCTAAATAAAAACATTCAGACACACCATTCTGCCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGCATGATCTAAATAAAAACATTCAGACACACCATTCTGCCTTTT  550

seq1  CCAGGTACATCTAGCATCACTCACCTTGCACTTCTGGGTTAACAGTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACATCTAGCATCACTCACCTTGCACTTCTGGGTTAACAGTTATA  600

seq1  TAGAGGAGAGCCCAGCGCAGTGTGTTAGATGTTGTCTCTGTTCCAGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGAGCCCAGCGCAGTGTGTTAGATGTTGTCTCTGTTCCAGCAAA  650

seq1  GAAGAGGTCCAGAGCAGTGCAGATGAGATTTTCTTCATTAAAACTTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGTCCAGAGCAGTGCAGATGAGATTTTCTTCATTAAAACTTGTAG  700

seq1  TAGTCTTGTCTGGGTACTATAAAGACATTGCA-TTTTTTTCAAGGATTTC  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGTCTTGTCTGGGTACTATAAAGACATTGCATTTTTTTTCAAGGATTTC  750

seq1  CTCAGTAATTGATTGATTGATTGATTCTTTTCTTATACTCATTTTGATTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAATTGATTGATTGATTGATTCTTTTCTTATACTCATTTTGATTG  800

seq1  CAGTTTCCCCTTCCTCCAATGTTATCAGTCTCCACCCTCATCCCAGTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCCCTTCCTCCAATGTTATCAGTCTCCACCCTCATCCCAGTCTC  850

seq1  CCCCAGATCCACTTCTCCTCAGTTTCCCTTCAGAAAAGAACAGTACTCCA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  CCCCAGATCCACTTCTCCTCAGTTTCCCTTCAAAAAAGAACAGTACTCCT  900

seq1  AGGGCTACCATCTGAATTTGACAAAGGAAGTTACAGTAAGGCTAAGTACA  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGGCTACCATCTGAATTTGACAAA-GAAGTTACAGTAAGGCTAAGTACA  949

seq1  AGCCCTCATATCTGCCCTGAATGGTGGCTAGTTAGTAGAAGGAAAAATGT  999
      ||||||||||||||||||  ||||||||||| |||||||| ||||| |||
seq2  AGCCCTCATATCTGCCCTTGATGGTGGCTAG-TAGTAGAA-GAAAATTGT  997

seq1  CCAAAGATCAGCTCCAAATAGTCAGAGGAACTCACACTTCTACTCTTAGG  1049
      |  |||||||||||  |||| ||||||||||||  ||||||||  |||||
seq2  C--AAGATCAGCTCTCAATA-TCAGAGGAACTCCAACTTCTACCTTTAGG  1044

seq1  AATCCCACAAAAACACAAA  1068
       || |||| ||||||||||
seq2  -ATTCCAC-AAAACACAAA  1061