BAC Information

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BAC

Clone NameB6Ng01-051M13
Chromosome4 (Build37)
Map Location 9,983,163 - 9,984,374
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039584, 4933402J24Rik, Asph, Gdf6, 4930448K20Rik
Downstream geneLOC666840, 1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M13.bB6Ng01-051M13.g
ACCDH875323DH875324
length1,1781,175
definitionDH875323|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M13, 5' end.DH875324|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaatcaatttagaaggcaaatactaatacagaatgttgtcttt
tgattcgcacacaggttctatggaacactacacacacacacacacacaca
cacacacacacacacacacacacacaaacacacacacacacactgagcag
gtagtgcccagggagattgtaagagcaagaagagaggagtttggttctcc
agtagtacatgttaattagcttgatgatggtaatcatttcacaatatata
catatgtaaagataacatcagatatcttaaatattttaattttatgtgtc
tatcattttgtaaaaatctagagaaatttttttgtgaacttaaactttag
gctttataaaaattgcttcttgagatgtagttgtaattattcttacataa
ctgataaaaatgggaaaatgaatcatacattttgacaaatagtaataaac
catgaaatgtgtaaatttattgggaagatagctcttgatgagatggtcag
tcagttcctggtttagtgaagagtaacacctttgaatgaggctggatttc
acacgattctattatttcttttcataaaggaacatgcaggggaactattt
tacataaatggaaatcaaatttttattataagttatattataaacataaa
atagtgttatattttctaaacttttatgacacttatacttaaattcattt
tgccacaaaatgtcaaaatgattttagctatatagcagcttataaatgtg
tagtcttcttacaatttcattgaaagtaagaagttagaaccacatgatac
atgacagtgcatgctatgaaatgcttgggtcttttatgttactaatactt
gacaccaaggtgtccttttttgaggcactctggaggtattttggactgat
gcacctgtttgcttgccactgctgtgcacaaagagaccagatctagaggc
ataagtcaacactttagaccgaagagtagggagagcatagtgcagatatt
cttctcaatgtcaaaaagaaaactacaatgcttgggtgctcctacaactg
agaagtagatggtcctaaagatacctgcttgcctgtttgtgctcaatact
tatgccatgaccaggaatttaagacaaaaaaatttgtgtggatatgaagg
ttgaaagcccaaagcaatgccgaagtct
gaattcttcttaatattgtctctgagtcaggaacccttttttataacaga
ggttgaaagtgggcacatgacaatagaagccactatttttttttgttttg
ttttttgttttattttttaattaggtattttcttcatttacatttccaat
gcgatcccaaaagtcccccatgcccacccttccactcccccccactccca
cttcttggccctggccttcccctgtactgaggcatataaagtttggaaga
ccaatgggcctctctttccactgatggctgactaggccatcttctgctac
atatgcagctagagacacgagctctggaggggtactggttagttcatatt
gttgttccacaaatagggttgcagatcccttaagctccttgggtactttc
tctagctcctccattgggtgccctgtgttccatccaatagctgactgtga
gtatccacttctgtatttgctaggcccaagaatagcctcacaagagagag
ctatatcagggtcctttcagcaaaatcttgctagtgtatgcaatggtgtc
agcgtttggaggctgattatgggatggatcctggcatgactctaactaag
gaagtgaacgatctgtatgataagaacttcaagtctctgaagaaataaat
tgaagaagatctcagaagatggaaagatctcccatgctcatggattggca
ggatcaatatagtaaaaatggctatcttgccaaaagcaatctacagattc
aatgcaatccccatcaaaattccaactccattcttcaacgaattggaaag
ggcaatctccaaattcatctggaatagcaaaaaacctaggatagcaaaaa
ctcttctcatgataaaagacctctggtggaatcaccatgcctgacctaaa
gctttactacagagcaattgtgataaaaactgcatgggtactggtatagc
gatagacagtagaccaatggaatagaattgaaaacccgaatgaacccaca
cacctgtgggcactgatcttggacaaggaagctaaagcatcagggaaaaa
aagacacctttcacacaatggtcttgcacaactctgcgtgttaatcagga
aagaatgttgatttgtccatccctatctctctgtctaaggtccaatggat
gggtacaggatcttccccaaaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_9983163_9984374
seq2: B6Ng01-051M13.b_43_1220

seq1  GAATTCTGAATCAATTTAGAAGGCAAATACTAATACAGAATGTTGTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATCAATTTAGAAGGCAAATACTAATACAGAATGTTGTCTTT  50

seq1  TGATTCGCACACAGGTTCTATGGAACACTACACACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCGCACACAGGTTCTATGGAACACTACACACACACACACACACACA  100

seq1  CACACACACACACACACACACACACAAACACACACACACACACTGAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACAAACACACACACACACACTGAGCAG  150

seq1  GTAGTGCCCAGGGAGATTGTAAGAGCAAGAAGAGAGGAGTTTGGTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCCCAGGGAGATTGTAAGAGCAAGAAGAGAGGAGTTTGGTTCTCC  200

seq1  AGTAGTACATGTTAATTAGCTTGATGATGGTAATCATTTCACAATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTACATGTTAATTAGCTTGATGATGGTAATCATTTCACAATATATA  250

seq1  CATATGTAAAGATAACATCAGATATCTTAAATATTTTAATTTTATGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTAAAGATAACATCAGATATCTTAAATATTTTAATTTTATGTGTC  300

seq1  TATCATTTTGTAAAAATCTAGAGAAATTTTTTTGTGAACTTAAACTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTGTAAAAATCTAGAGAAATTTTTTTGTGAACTTAAACTTTAG  350

seq1  GCTTTATAAAAATTGCTTCTTGAGATGTAGTTGTAATTATTCTTACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATAAAAATTGCTTCTTGAGATGTAGTTGTAATTATTCTTACATAA  400

seq1  CTGATAAAAATGGGAAAATGAATCATACATTTTGACAAATAGTAATAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAAAATGGGAAAATGAATCATACATTTTGACAAATAGTAATAAAC  450

seq1  CATGAAATGTGTAAATTTATTGGGAAGATAGCTCTTGATGAGATGGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATGTGTAAATTTATTGGGAAGATAGCTCTTGATGAGATGGTCAG  500

seq1  TCAGTTCCTGGTTTAGTGAAGAGTAACACCTTTGAATGAGGCTGGATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCTGGTTTAGTGAAGAGTAACACCTTTGAATGAGGCTGGATTTC  550

seq1  ACACGATTCTATTATTTCTTTTCATAAAGGAACATGCAGGGGAACTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGATTCTATTATTTCTTTTCATAAAGGAACATGCAGGGGAACTATTT  600

seq1  TACATAAATGGAAATCAAATTTTTATTATAAGTTATATTATAAACATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAATGGAAATCAAATTTTTATTATAAGTTATATTATAAACATAAA  650

seq1  ATAGTGTTATATTTTCTAAACTTTTATGACACTTATACTTAAATTCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTATATTTTCTAAACTTTTATGACACTTATACTTAAATTCATTT  700

seq1  TGCCACAAAATGTCAAAATGATTTTAGCTATATAGCAGCTTATAAATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAAATGTCAAAATGATTTTAGCTATATAGCAGCTTATAAATGTG  750

seq1  TAGTCTTCTTACAATTTCATTGAAAGTAAGAAGTTAGAACCACATGATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTCTTACAATTTCATTGAAAGTAAGAAGTTAGAACCACATGATAC  800

seq1  ATGACAGTGCATGCTATGAAATGCTTGGGTCTTTTATGTTACTAATACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTGCATGCTATGAAATGCTTGGGTCTTTTATGTTACTAATACTT  850

seq1  GACAACCAAGGTTGTCCTTTTTTGAGGCACTCTGGAGGTAATTTTTGGAA  900
      ||| ||||||| ||||||||||||||||||||||||||||  |||||| |
seq2  GAC-ACCAAGG-TGTCCTTTTTTGAGGCACTCTGGAGGTA--TTTTGG-A  895

seq1  CTGATGCACCTGTTTTGCTTGCCACTGCTGTGCAACAAAGAGACCCAGAA  950
      |||||||||||| |||||||||||||||||||| ||||||||| |||| |
seq2  CTGATGCACCTG-TTTGCTTGCCACTGCTGTGC-ACAAAGAGA-CCAG-A  941

seq1  TCTAGAGGCATAAGTCAACCACTTTAGACCCGAAGGAGTTAGGGAGAGCA  1000
      |||||||||||||||||| ||||||||| ||||| ||| |||||||||||
seq2  TCTAGAGGCATAAGTCAA-CACTTTAGA-CCGAA-GAG-TAGGGAGAGCA  987

seq1  TAGTGCAGATATTCTCTCCAATGTCAAAAGGAAAACTACAATGCTTGGGT  1050
      |||||||||||||||   ||||||||||| ||||||||||||||||||||
seq2  TAGTGCAGATATTCTTCTCAATGTCAAAAAGAAAACTACAATGCTTGGGT  1037

seq1  GACTCCTACCAACTGAG-AGTAGAATGATCTATATGATACCTGTCTTGCA  1099
      | |||||| |||||||| ||||| ||| ||   | |||||||| ||||| 
seq2  G-CTCCTA-CAACTGAGAAGTAG-ATGGTCCTAAAGATACCTG-CTTGC-  1082

seq1  CTGTTTGTGCTTCAATAACTTAATGCCATGGACTCAGTGATTTATAAAGT  1149
      |||||||||| ||||| |||| ||||||| ||| |||  ||||   ||| 
seq2  CTGTTTGTGC-TCAAT-ACTT-ATGCCAT-GAC-CAGGAATTT---AAG-  1123

seq1  ACAGAAATTAATTTTGTGTGGATATAGAGGCTGAGAAGCCCAAAGTCAAA  1199
      ||| ||   || |||||||||||||  ||| ||| ||||||||||   ||
seq2  ACAAAA---AAATTTGTGTGGATATGAAGGTTGA-AAGCCCAAAG--CAA  1167

seq1  TGCCAGAAAGTCT  1212
      ||||   ||||||
seq2  TGCC--GAAGTCT  1178