BAC Information

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BAC

Clone NameB6Ng01-051M22
Chromosome4 (Build37)
Map Location 104,186,094 - 104,303,948
singlet/doubletdoublet
Overlap geneDab1
Upstream geneLOC665451, LOC100039940, EG665460, LOC622315
Downstream geneC8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b, LOC433742, LOC665518, LOC434381
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M22.bB6Ng01-051M22.g
ACCDH875341DH875342
length8731,107
definitionDH875341|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M22, 5' end.DH875342|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,303,073 - 104,303,948)(104,186,094 - 104,187,198)
sequence
gaattcttgaggaaatagggcttaaattgaaagacctatagatacttatt
tggcataagtcagataaaggaagggacaagaagactgggtaagagaacta
ggttgggagagactcttctaggcaaaggaagagagagaggagggtggtat
ttttggtgtgagtctgttctctacatattatccctacattgtgcctctac
tacaccagtattgcttgtgcaggttgatgaagtatctcctactggctgat
ttcatagaaattgtctctctgctttgcctgtcaggccaccaggagagaag
cacatagatgtgagcctgaggcaaggttgctaccccgggatgtgactaac
tgcaccatgggataatcatgtgttgactggacgactgggccatctgagca
gttgtggagggcggatggaattcatcttcccatcccagtgcctgatgccc
agtaggaactcagtaacaaactgataaaaaaaaaaaaaaaattccatctt
tatagaggggagtcaggcaacaaagaaaacaccattcccaaagtgtttat
ggaactctgggtgggatgtatgcctcatggaatattgaaccctagttttc
ccagtgatgttcatccatatggatgcatgaaaaatcacaatggcagaagt
tagaagtggcctcatgaggtttttgtttttttttttttttaatattttta
ttaggtattttcctcatttacatttccaatgctatcccaaagtcccccat
accctcccccccaactcccctatccacccactctcactttttggccctgg
cgttccctggtactggggctataaagtttgcaagtccaatgggctctctt
ccattgatggccgactaaggcca
gaattcttgccctatcaatttgaatttccccacttctaaaagccagcagg
tctactgtcttgtgtggtatatgcttgtgtctggcaagatcagtgatttc
tgatgtgattaaaggggctcatgcaagtgaagaattattctaaaaaatag
atgctttgggtaattgattatcttgtgtgtgttgccctaatgatgctgtc
tgcaggatgaaatatctctcctccattttccaaagcagcagtctgtaacc
ccaggtgacactaggatttccttactagctttaattactcagtacagaag
ctgccgtgccgagcttcggcgggcttcacccacaatgtgaatgcccactg
atgagctagcccatcattgcgcactggggtagtcatggaatttggaaacc
attagaaagctaggcaatttcattattcattcacttgaaataatcccggg
actgctttcagtgacatggttccttcggcaaataaagataagccaaatcc
ctgggcactccaagaaggggcagattctctaaattaattccaggctcaaa
taattcagcagtatttgtaatattctgtgcataaattgccaatttgctag
cgagatcaggaaatgataaaggcttctgccccctccccccctcctcatct
taacaagtgccgaggcagctataaaataaaagaaatgttttattcttaat
aaatgtcctatcaggtagtgcactgattaaaggtgtccaaacatggcatc
cctccccctacaaagcaattatttttcatcagaaagactaaactatatgg
ggagctgaggatggctgcaattgggcttttccacacaggaaagtttatgt
taataataaatgtacttgcaatgtgaagtattatgttaataataaatgta
ctcacaatatgaacaagtcggagatgaagggtgataataccacagtgtcc
tttattcattgtagcgaatgttttttttgtttgtgggttgtgaaagactg
ttggctctttcctgatgataaccgaccccaggcacccctaattccacccc
ctcatttcttggaatcctctttcctcttttccacctctacctgccttttt
ggcatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_104303073_104303948
seq2: B6Ng01-051M22.b_45_917 (reverse)

seq1  TGGCC-TAGTCGGCCATCAATGGAAAGAGAGGCCCATTGGACTTGCAAAC  49
      ||||| ||||||||||||||||| |||||| |||||||||||||||||||
seq2  TGGCCTTAGTCGGCCATCAATGG-AAGAGA-GCCCATTGGACTTGCAAAC  48

seq1  TTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGTGAGAGTGGG  99
      |||||| ||||||||||  |||||||||||||||||||||||||||||||
seq2  TTTATA-GCCCCAGTACCAGGGAACGCCAGGGCCAAAAAGTGAGAGTGGG  97

seq1  TGGATAGGGGAGTTGGGGGGGAGGGTATGGGGGACTTTTGGGATAGCATT  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGATAGGGGAGTTGGGGGGGAGGGTATGGGGGAC-TTTGGGATAGCATT  146

seq1  GGAAATGTAAATGAGGAAAATACCTAATAAAAATATTTAAAAAAAAAAAA  199
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGAAATGTAAATGAGGAAAATACCTAATAAAAATA-TTAAAAAAAAAAAA  195

seq1  AAACAAAAACCTCATGAGGCCACTTCTAACTTCTGCCATTGTGATTTTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAACCTCATGAGGCCACTTCTAACTTCTGCCATTGTGATTTTTC  245

seq1  ATGCATCCATATGGATGAACATCACTGGGAAAACTAGGGTTCAATATTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCCATATGGATGAACATCACTGGGAAAACTAGGGTTCAATATTCC  295

seq1  ATGAGGCATACATCCCACCCAGAGTTCCATAAACACTTTGGGAATGGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCATACATCCCACCCAGAGTTCCATAAACACTTTGGGAATGGTGT  345

seq1  TTTCTTTGTTGCCTGACTCCCCTCTATAAAGATGGAA-TTTTTTTTTTTT  398
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTCTTTGTTGCCTGACTCCCCTCTATAAAGATGGAATTTTTTTTTTTTT  395

seq1  TTTATCAGTTTGTTACTGAGTTCCTACTGGGCATCAGGCACTGGGATGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGTTTGTTACTGAGTTCCTACTGGGCATCAGGCACTGGGATGGG  445

seq1  AAGATGAATTCCATCCGCCCTCCACAACTGCTCAGATGGCCCAGTCGTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAATTCCATCCGCCCTCCACAACTGCTCAGATGGCCCAGTCGTCC  495

seq1  AGTCAACACATGATTATCCCATGGTGCAGTTAGTCACATCCCGGGGTAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACACATGATTATCCCATGGTGCAGTTAGTCACATCCCGGGGTAGC  545

seq1  AACCTTGCCTCAGGCTCACATCTATGTGCTTCTCTCCTGGTGGCCTGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGCCTCAGGCTCACATCTATGTGCTTCTCTCCTGGTGGCCTGACA  595

seq1  GGCAAAGCAGAGAGACAATTTCTATGAAATCAGCCAGTAGGAGATACTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGCAGAGAGACAATTTCTATGAAATCAGCCAGTAGGAGATACTTC  645

seq1  ATCAACCTGCACAAGCAATACTGGTGTAGTAGAGGCACAATGTAGGGATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCTGCACAAGCAATACTGGTGTAGTAGAGGCACAATGTAGGGATA  695

seq1  ATATGTAGAGAACAGACTCACACCAAAAATACCACCCTCCTCTCTCTCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGAGAACAGACTCACACCAAAAATACCACCCTCCTCTCTCTCTT  745

seq1  CCTTTGCCTAGAAGAGTCTCTCCCAACCTAGTTCTCTTACCCAGTCTTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCCTAGAAGAGTCTCTCCCAACCTAGTTCTCTTACCCAGTCTTCT  795

seq1  TGTCCCTTCCTTTATCTGACTTATGCCAAATAAGTATCTATAGGTCTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTTCCTTTATCTGACTTATGCCAAATAAGTATCTATAGGTCTTTC  845

seq1  AATTTAAGCCCTATTTCCTCAAGAATTC  876
      ||||||||||||||||||||||||||||
seq2  AATTTAAGCCCTATTTCCTCAAGAATTC  873

seq1: chr4_104186094_104187198
seq2: B6Ng01-051M22.g_67_1173

seq1  GAATTCTTGCCCTATCAATTTGAATTTCCCCACTTCTAAAAGCCAGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCCTATCAATTTGAATTTCCCCACTTCTAAAAGCCAGCAGG  50

seq1  TCTACTGTCTTGTGTGGTATATGCTTGTGTCTGGCAAGATCAGTGATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTCTTGTGTGGTATATGCTTGTGTCTGGCAAGATCAGTGATTTC  100

seq1  TGATGTGATTAAAGGGGCTCATGCAAGTGAAGAATTATTCTAAAAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGATTAAAGGGGCTCATGCAAGTGAAGAATTATTCTAAAAAATAG  150

seq1  ATGCTTTGGGTAATTGATTATCTTGTGTGTGTTGCCCTAATGATGCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGGGTAATTGATTATCTTGTGTGTGTTGCCCTAATGATGCTGTC  200

seq1  TGCAGGATGAAATATCTCTCCTCCATTTTCCAAAGCAGCAGTCTGTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGATGAAATATCTCTCCTCCATTTTCCAAAGCAGCAGTCTGTAACC  250

seq1  CCAGGTGACACTAGGATTTCCTTACTAGCTTTAATTACTCAGTACAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGACACTAGGATTTCCTTACTAGCTTTAATTACTCAGTACAGAAG  300

seq1  CTGCCGTGCCGAGCTTCGGCGGGCTTCACCCACAATGTGAATGCCCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTGCCGAGCTTCGGCGGGCTTCACCCACAATGTGAATGCCCACTG  350

seq1  ATGAGCTAGCCCATCATTGCGCACTGGGGTAGTCATGGAATTTGGAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTAGCCCATCATTGCGCACTGGGGTAGTCATGGAATTTGGAAACC  400

seq1  ATTAGAAAGCTAGGCAATTTCATTATTCATTCACTTGAAATAATCCCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAAGCTAGGCAATTTCATTATTCATTCACTTGAAATAATCCCGGG  450

seq1  ACTGCTTTCAGTGACATGGTTCCTTCGGCAAATAAAGATAAGCCAAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTCAGTGACATGGTTCCTTCGGCAAATAAAGATAAGCCAAATCC  500

seq1  CTGGGCACTCCAAGAAGGGGCAGATTCTCTAAATTAATTCCAGGCTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCACTCCAAGAAGGGGCAGATTCTCTAAATTAATTCCAGGCTCAAA  550

seq1  TAATTCAGCAGTATTTGTAATATTCTGTGCATAAATTGCCAATTTGCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAGCAGTATTTGTAATATTCTGTGCATAAATTGCCAATTTGCTAG  600

seq1  CGAGATCAGGAAATGATAAAGGCTTCTGCCCCCTCCCCCCCTCCTCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATCAGGAAATGATAAAGGCTTCTGCCCCCTCCCCCCCTCCTCATCT  650

seq1  TAACAAGTGCCGAGGCAGCTATAAAATAAAAGAAATGTTTTATTCTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGTGCCGAGGCAGCTATAAAATAAAAGAAATGTTTTATTCTTAAT  700

seq1  AAATGTCCTATCAGGTAGTGCACTGATTAAAGGTGTCCAAACATGGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTATCAGGTAGTGCACTGATTAAAGGTGTCCAAACATGGCATC  750

seq1  CCTCCCCCTACAAAGCAATTATTTTTCATCAGAAAGACTAAACTATATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTACAAAGCAATTATTTTTCATCAGAAAGACTAAACTATATGG  800

seq1  GGAGCTGAGGATGGCTGCAATTGGGCTTTTCCACACAGGAAAGTTTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAGGATGGCTGCAATTGGGCTTTTCCACACAGGAAAGTTTATGT  850

seq1  TAATAATAAATGTACTTGCAATGTGAAGTATTATGTTAATAATAAATGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAAATGTACTTGCAATGTGAAGTATTATGTTAATAATAAATGTA  900

seq1  CTCACAATATGAACAAGTCGGAGATGAAGGGTGATAATACCACAGGTGTC  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCACAATATGAACAAGTCGGAGATGAAGGGTGATAATACCACA-GTGTC  949

seq1  CTTTATTCATTGTAGCGAATGTTTTGTTTTGTTTGTGGGTTGTGAAAGAC  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTTTATTCATTGTAGCGAATGTTTT-TTTTGTTTGTGGGTTGTGAAAGAC  998

seq1  TGTTGGCTCTTTCCTGATGATAACCGACCCCAGGCACCCCTAAATCCA-C  1049
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  TGTTGGCTCTTTCCTGATGATAACCGACCCCAGGCACCCCTAATTCCACC  1048

seq1  CCCTCATTTC-TGGAAT-CTCTTTCCTCTTTCCCACTCCTA-CTGCCTTT  1096
      |||||||||| |||||| ||||||||||||| ||||  ||| ||||||||
seq2  CCCTCATTTCTTGGAATCCTCTTTCCTCTTTTCCACCTCTACCTGCCTTT  1098

seq1  TGGGCATCC  1105
      | |||||||
seq2  TTGGCATCC  1107