BAC Information

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BAC

Clone NameB6Ng01-052J15
Chromosome4 (Build37)
Map Location 19,128,633 - 19,129,756
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667251, LOC435772
Downstream geneCngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052J15.bB6Ng01-052J15.g
ACCDH875907DH875908
length1,1501,113
definitionDH875907|Mus musculus domesticus DNA, BAC clone: B6Ng01-052J15, 5' end.DH875908|Mus musculus domesticus DNA, BAC clone: B6Ng01-052J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgataccattgcatacactagcaagatttattgaaag
gacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaagtagccagagctaaagggatctgcaacctatagt
ggaacaacattatgagctacagtacccggagctctgacctctagctgcat
atatcaagatggcctagtgcctcacctggaaagagagcccatgactgcaa
cttatatgccagttcaggatatcaaggccaaaagggattgtggtaggtat

gaattctaatcaactatttcagtgctaatgtagagttgtttcaaagtgaa
agaattaaaatagaggatcagacctctgttcaatttccaggaatatctat
ttttgtgtgggagcaatatgtggaggtgtccattcagccttatagtcacc
attccagggacggccacagggtgaggaagcaaatgtgctaagattttagt
ttttgagtaaagattgtggatggcttcctttcctgtaggctcagatgaaa
gtattttatgttgccagggcagaacctattgggaggtaaatgaggttgga
gaaaaggagtctacatgcctacaatagagcagttgtaggaatagattaga
aatgtgtaggtcatattagactccattatatttcttcctggtgtggttgg
aatgtatttctctaaaggtcatgtgttagaactttggtttcaaatttata
tgttaatgagatctagagaccagtctcttgggtagtagttatgaagtcat
gaaggtgtggtccctggactagcagcttgctctcctttccttgtgatgtt
ctctataagtcttttcatgtgcatgtgtgtgcactttaggtttatgtatg
tatgtttacatgtgtatagttgaatatgtatgttcatgtgtgtataaata
tgtgcggaggcatgaattttactgggtgtttcttcaagtgttcttgattg
actactgaggcagggtctctctaaaaagcagagctcaatgatgctggcct
atgcagttagccagcttcttccctgatttcccctgtctttgtgttgaatg
ctgggattataggtaatcaccacaccacccagcattttacatggatggag
gttagttctcaggcttttgacaggagcacttttccaccaagttgtctttc
aaacatctttgcactgtttttgtagcaagaagaccttggatgtggggcag
acgctgctatcttgtccttagactttcatttccctagaaccactggttag
ttaacgtatcttctcctccataataatgatcacatttcagttagttagta
gtaaggaacttcttttgcctgcaaactatacataactttgtctcaaactt
tcactgggaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_19128633_19129756
seq2: B6Ng01-052J15.g_65_1177 (reverse)

seq1  TTCTTCCACAGTGAAAGTTCTGAGACAAAGCTAATGTATAGTATTTGCAG  50
      ||||||| ||||||||||| |||||||||| | ||||||||  |||||||
seq2  TTCTTCC-CAGTGAAAGTT-TGAGACAAAG-TTATGTATAG--TTTGCAG  45

seq1  AGCAAATAGAAGTTCCTATAACTAACTAACTAACTGAAATGTGATCATTT  100
       ||||| |||||||||  | ||| ||||||||||||||||||||||||| 
seq2  -GCAAA-AGAAGTTCC--TTACT-ACTAACTAACTGAAATGTGATCATTA  90

seq1  ATATGGAGGAGAAGATTAGTTAACTAACCAGTGGTTCTAGGAAATGGAAA  150
       |||||||||||||||  ||||||||||||||||||||||| ||  ||||
seq2  TTATGGAGGAGAAGATACGTTAACTAACCAGTGGTTCTAGGGAAATGAAA  140

seq1  GTCTAAGGACAGGATAGCAGCGTCTGCCCCACATCCAAGGTCTTCTTGCT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGGACAAGATAGCAGCGTCTGCCCCACATCCAAGGTCTTCTTGCT  190

seq1  AC-AAAACAGTGCAAAGATGTTTGGAAAGACAACTTGGTGGATAAAGTGC  249
      || |||||||||||||||||||| |||||||||||||||||| |||||||
seq2  ACAAAAACAGTGCAAAGATGTTT-GAAAGACAACTTGGTGGA-AAAGTGC  238

seq1  TCCTGTCAAAAGCCTGAGAACTAACCTCCATCCATGTAAAATGCTGGGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCAAAAGCCTGAGAACTAACCTCCATCCATGTAAAATGCTGGGTG  288

seq1  GTGTGGTGATTACCTATAATCCCAGCATTCAACACAAAGACAGGGGAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTGATTACCTATAATCCCAGCATTCAACACAAAGACAGGGGAAAT  338

seq1  CAGGGAAGAAGCTGGCTAACTGCATAGGCCAGCATCATTGAGCTCTGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGAAGCTGGCTAACTGCATAGGCCAGCATCATTGAGCTCTGCTT  388

seq1  TTTAGAGAGACCCTGCCTCAGTAGTCAATCAAGAACACTTGAAGAAACAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAGACCCTGCCTCAGTAGTCAATCAAGAACACTTGAAGAAACAC  438

seq1  CCAGTAAAATTCATGCCTCCGCACATATTTATACACACATGAACATACAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAAATTCATGCCTCCGCACATATTTATACACACATGAACATACAT  488

seq1  ATTCAACTATACACATGTAAACATACATACATAAACCTAAAGTGCACACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTATACACATGTAAACATACATACATAAACCTAAAGTGCACACA  538

seq1  CATGCACATGAAAAGACTTATAGAGAACATCACAAGGAAAGGAGAGCAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACATGAAAAGACTTATAGAGAACATCACAAGGAAAGGAGAGCAAG  588

seq1  CTGCTAGTCCAGGGACCACACCTTCATGACTTCATAACTACTACCCAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGTCCAGGGACCACACCTTCATGACTTCATAACTACTACCCAAGA  638

seq1  GACTGGTCTCTAGATCTCATTAACATATAAATTTGAAACCAAAGTTCTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTCTCTAGATCTCATTAACATATAAATTTGAAACCAAAGTTCTAA  688

seq1  CACATGACCTTTAGAGAAATACATTCCAACCACACCAGGAAGAAATATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACCTTTAGAGAAATACATTCCAACCACACCAGGAAGAAATATAA  738

seq1  TGGAGTCTAATATGACCTACACATTTCTAATCTATTCCTACAACTGCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTAATATGACCTACACATTTCTAATCTATTCCTACAACTGCTCT  788

seq1  ATTGTAGGCATGTAGACTCCTTTTCTCCAACCTCATTTACCTCCCAATAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGGCATGTAGACTCCTTTTCTCCAACCTCATTTACCTCCCAATAG  838

seq1  GTTCTGCCCTGGCAACATAAAATACTTTCATCTGAGCCTACAGGAAAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCCCTGGCAACATAAAATACTTTCATCTGAGCCTACAGGAAAGGA  888

seq1  AGCCATCCACAATCTTTACTCAAAAACTAAAATCTTAGCACATTTGCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCCACAATCTTTACTCAAAAACTAAAATCTTAGCACATTTGCTTC  938

seq1  CTCACCCTGTGGCCGTCCCTGGAATGGTGACTATAAGGCTGAATGGACAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCTGTGGCCGTCCCTGGAATGGTGACTATAAGGCTGAATGGACAC  988

seq1  CTCCACATATTGCTCCCACACAAAAATAGATATTCCTGGAAATTGAACAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATATTGCTCCCACACAAAAATAGATATTCCTGGAAATTGAACAG  1038

seq1  AGGTCTGATCCTCTATTTTAATTCTTTCACTTTGAAACAACTCTACATTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGATCCTCTATTTTAATTCTTTCACTTTGAAACAACTCTACATTA  1088

seq1  GCACTGAAATAGTTGATTAGAATTC  1124
      |||||||||||||||||||||||||
seq2  GCACTGAAATAGTTGATTAGAATTC  1113