BAC Information

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BAC

Clone NameB6Ng01-052L07
Chromosome4 (Build37)
Map Location 7,262,516 - 7,263,667
singlet/doubletsinglet
Overlap genenone
Upstream geneSdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052L07.bB6Ng01-052L07.g
ACCDH875977DH875978
length1,1461,151
definitionDH875977|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L07, 5' end.DH875978|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacatcttgccccacaaagaaagtgtctcataatggctgtattt
aagtcagtgctcactggcagatcatatctccagatgtctacatcatattg
aactgtaacagagtgtatcattcatatctgtttcagcatgtttgacctag
aggttatgtccatgggataataaaacagtaactctcccaattgccaaatt
ggactatttaagtagttctatgatctactctgtgtttagataaagtctat
ttcaatcacaactggattcagctagattttttatggtgtgctacaagcaa
tgttttttaaaattatttcctgtggtatatctcacttgtgaaaataatga
gggaagactgcatgtactgatttctttccttaacacatagtatgtccttt
attttaatgtcaaatcatcattaaatctttcacaaacacaataattatat
cttagctcatgtaagtagggaagctctcatacaatcaaagaaaaggagga
aatacacacggtaggctcaatgcatttccctgagaaggaattagtatttt
aaattaaaatgcatgcctgccctgcacagtaaggcatgaacaaatctctg
tgatttattaaggtttaattttttctgttataattcttttggtattggaa
aggaatcacatgtgtgctcatattttattgaatgactggctatctagtcc
aaataatctcttcagctacttgtaaatgtaggtaggtgagctgacagtta
caaaccatgtcacagtcacaagagagacctttaaacagggatgaaaatct
ttctgtgattgaaaaagtgtattcatgaaattttttttgatattagtagc
atagatgttgaaaagtcagcacccaacagaatcatcagctcagtctattc
agggtacagtatttacaatactgaatccagtcactttctgtttaatgaac
ctgtgtaactattacatggatataaacaaaagtcaacatacctgaattat
gatttgtcttgaatatagtgtatatgacttttatcatatttctcaacatt
atagaaaccatttgcagttaaattgttgtttcataaataaatatgtttca
tggaggcagacggaaaactgaaactgtaggatagtaccctggtgat
gaattcctgatctttccatgtcttttatcatgaatgggtgttgaggatga
tcatgtggtttttgtctttgagtttgtttatatactggattacgttgatg
gatttccatatattgaaccatccctgcctcgctgggatgaagcctacttg
ttcaggatggatgattgttttgatgtgttcttggattcattagaaagaac
tttattgaggatttttgcatcgatattcataagggaaattggtctgaagt
tctctttgttgggtatttttgtggtttaggtatcagagtaattgtggctt
tatagaatgagttgggtagagtaccttctctttctattattttgaagagt
ttgtgaagaactgggattagatcttctttcaatgtctgatcgaactctgc
actaaacccatctggtcctgagctttttttggttgggagactattaatga
ctgcttctatttctttaggggatataggacggtttagatcattaacctga
tcttggtttaactttggtacctgatatctgtctagaaacttttccatttc
atccaggttctccagttttgttgagtatagccttttggagaaggatctga
tgatgttttggatttcttcaggatctgttatgtctcccttttcatttctg
attttcttaattaggatgctttccctgtgccctctagtgagtctggctaa
gggtttatctatctttgttcattttctcaaagaaccagctcctcatttgg
ttgattctttgaatagttcttcttgtttccacttggttgatttcccccct
gagtttgattatttcttgccatctactcctcttgggtgatttgcttcctt
ttgttctagagcttttaggtatgttgtccagcttctaatgtgtgctctct
atagtttctttttggagcactcagatctatgagttttctcttagaatgct
ttcattgtgcccataagtttgggtatgttgtgcttcatttcataaactca
aagtcttaatttctttctttattacttccttgaccaagatcattgaaaag
gtgtggtcatttccaagaatgtggcttttatatttatttgtattgaacac
ctaggcagggggcctgaatagggtgtgggagaggttcaaaatctgttaac
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7262516_7263667
seq2: B6Ng01-052L07.b_45_1190

seq1  GAATTCAACATCTTGCCCCACAAAGAAAGTGTCTCATAATGGCTGTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATCTTGCCCCACAAAGAAAGTGTCTCATAATGGCTGTATTT  50

seq1  AAGTCAGTGCTCACTGGCAGATCATATCTCCAGATGTCTACATCATATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTGCTCACTGGCAGATCATATCTCCAGATGTCTACATCATATTG  100

seq1  AACTGTAACAGAGTGTATCATTCATATCTGTTTCAGCATGTTTGACCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAACAGAGTGTATCATTCATATCTGTTTCAGCATGTTTGACCTAG  150

seq1  AGGTTATGTCCATGGGATAATAAAACAGTAACTCTCCCAATTGCCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATGTCCATGGGATAATAAAACAGTAACTCTCCCAATTGCCAAATT  200

seq1  GGACTATTTAAGTAGTTCTATGATCTACTCTGTGTTTAGATAAAGTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATTTAAGTAGTTCTATGATCTACTCTGTGTTTAGATAAAGTCTAT  250

seq1  TTCAATCACAACTGGATTCAGCTAGATTTTTTATGGTGTGCTACAAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCACAACTGGATTCAGCTAGATTTTTTATGGTGTGCTACAAGCAA  300

seq1  TGTTTTTTAAAATTATTTCCTGTGGTATATCTCACTTGTGAAAATAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTAAAATTATTTCCTGTGGTATATCTCACTTGTGAAAATAATGA  350

seq1  GGGAAGACTGCATGTACTGATTTCTTTCCTTAACACATAGTATGTCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGACTGCATGTACTGATTTCTTTCCTTAACACATAGTATGTCCTTT  400

seq1  ATTTTAATGTCAAATCATCATTAAATCTTTCACAAACACAATAATTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGTCAAATCATCATTAAATCTTTCACAAACACAATAATTATAT  450

seq1  CTTAGCTCATGTAAGTAGGGAAGCTCTCATACAATCAAAGAAAAGGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTCATGTAAGTAGGGAAGCTCTCATACAATCAAAGAAAAGGAGGA  500

seq1  AATACACACGGTAGGCTCAATGCATTTCCCTGAGAAGGAATTAGTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACACGGTAGGCTCAATGCATTTCCCTGAGAAGGAATTAGTATTTT  550

seq1  AAATTAAAATGCATGCCTGCCCTGCACAGTAAGGCATGAACAAATCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAATGCATGCCTGCCCTGCACAGTAAGGCATGAACAAATCTCTG  600

seq1  TGATTTATTAAGGTTTAATTTTTTCTGTTATAATTCTTTTGGTATTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATTAAGGTTTAATTTTTTCTGTTATAATTCTTTTGGTATTGGAA  650

seq1  AGGAATCACATGTGTGCTCATATTTTATTGAATGACTGGCTATCTAGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCACATGTGTGCTCATATTTTATTGAATGACTGGCTATCTAGTCC  700

seq1  AAATAATCTCTTCAGCTACTTGTAAATGTAGGTAGGTGAGCTGACAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCTCTTCAGCTACTTGTAAATGTAGGTAGGTGAGCTGACAGTTA  750

seq1  CAAACCATGTCACAGTCACAAGAGAGACCTTTAAACAGGGATGAAAATC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAAACCATGTCACAGTCACAAGAGAGACCTTTAAACAGGGATGAAAATCT  800

seq1  TTCTGTGATTGAAAAAGTGTATTCATGAAATTTTTTTTGATATTAGTAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGATTGAAAAAGTGTATTCATGAAATTTTTTTTGATATTAGTAGC  850

seq1  ATAGATGTTGAAAAGTCAGCACCCAACAGAATCATCAGCTCAGTCTATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTTGAAAAGTCAGCACCCAACAGAATCATCAGCTCAGTCTATTC  900

seq1  AGGGTACAGTATTTACAATACTGAATCCAGTCACTTTCTGTTTAATGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACAGTATTTACAATACTGAATCCAGTCACTTTCTGTTTAATGAAC  950

seq1  CTGTGTAACTA-TACATGGATATAAACAAAAGTCAACATACCTGAATTAT  998
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAACTATTACATGGATATAAACAAAAGTCAACATACCTGAATTAT  1000

seq1  GA-TTGTCTTGAATTATAGTGTATATGACTTTTATCATA-TTCTC-ACAT  1045
      || |||||||||| ||||||||||||||||||||||||| ||||| ||||
seq2  GATTTGTCTTGAA-TATAGTGTATATGACTTTTATCATATTTCTCAACAT  1049

seq1  TATAGAAACCATTTTGCAGTTAAAATGGTTGTTTCATAAATAAAATATGG  1095
      ||||||||||| ||||||||| |||| |||||||||||||| ||||||| 
seq2  TATAGAAACCA-TTTGCAGTT-AAATTGTTGTTTCATAAAT-AAATATGT  1096

seq1  TTCATAGCAGGGCAGACAGAAAACTGGAGACTGTAAGGATTAGTACACAG  1145
      ||||| |   ||||||| ||||||| || ||||| |||| |||||| |  
seq2  TTCATGG--AGGCAGACGGAAAACT-GAAACTGT-AGGA-TAGTACCC--  1139

seq1  TGGTGAT  1152
      |||||||
seq2  TGGTGAT  1146