MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-053C20
Chromosome	4 (Build37)
Map Location	86,061,566 - 86,061,998
singlet/doublet	singlet
Overlap gene	Adamtsl1
Upstream gene	A930009N24, LOC668052
Downstream gene	4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
Link	Open Mouse BAC browser

Click to get alignment info.

name	A930009N24 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:329876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC668052 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Adamtsl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77739 MGI:1924989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930500O09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75811 MGI:1923061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rraga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68441 MGI:1915691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6230416J20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230376 MGI:1923389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040388 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 77 ESTs, 1 Protein

name	Adfp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11520 MGI:87920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624685 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624685 MGI:3645185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Dennd4c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329877 MGI:1914769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rps6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20104 MGI:98159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asah3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230379 MGI:1920932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc24a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76376 MGI:1923626
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930009N24 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94371946 GeneID:329876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein A930009N24 transcript_id : XM_898400.2

name	Adamtsl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:127139354 GeneID:77739 MGI:1924989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADAMTS-like 1 transcript_id : NM_029967.2

name	Adamtsl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369757 GeneID:77739 MGI:1924989
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADAMTS-like 1 transcript_id : NM_172542.1

name	4930500O09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487359 GeneID:75811 MGI:1923061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930500O09 gene transcript_id : NM_001081096.1

name	Rraga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560874 GeneID:68441 MGI:1915691
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras-related GTP binding A transcript_id : NM_178376.2

name	6230416J20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559771 GeneID:230376 MGI:1923389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6230416J20 gene transcript_id : NM_173400.2

name	LOC100040388 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252599 GeneID:100040388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 77 ESTs, 1 Protein product : similar to adipose differentiation related protein transcript_id : XM_001474593.1

name	Adfp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116235488 GeneID:11520 MGI:87920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adipose differentiation related protein transcript_id : NM_007408.3

name	Dennd4c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486609 GeneID:329877 MGI:1914769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DENN/MADD domain containing 4C transcript_id : NM_001081014.1

name	Rps6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358015 GeneID:20104 MGI:98159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S6 transcript_id : NM_009096.3

name	Asah3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21314857 GeneID:230379 MGI:1920932
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acylsphingosine amidohydrolase 3-like transcript_id : NM_139306.1

name	Slc24a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378012 GeneID:76376 MGI:1923626
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 transcript_id : NM_172426.2

name	A930009N24 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82893710 GeneID:329876
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903493.1

name	Adamtsl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:127139355 GeneID:77739 MGI:1924989
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ADAMTS-like 1 isoform 1 protein_id : NP_084243.2

name	Adamtsl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369758 CCDS:CCDS18304.1 GeneID:77739 MGI:1924989
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : ADAMTS-like 1 isoform 2 protein_id : NP_766130.1

name	4930500O09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487360 GeneID:75811 MGI:1923061
definition	codon_start : 1 note : likely ortholog of H. sapiens chromosome 9 open reading frame 138 (C9orf138) product : hypothetical protein LOC75811 protein_id : NP_001074565.1

name	Rraga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541819 CCDS:CCDS18306.1 GeneID:68441 MGI:1915691
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0051219 - phosphoprotein binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008219 - cell death [Evidence ISS]; GO:0045919 - positive regulation of cytolysis [Evidence ISS]; GO:0042268 - regulation of cytolysis [Evidence ISS]; GO:0019048 - virus-host interaction [Evidence ISS] codon_start : 1 note : Ras-related GTP-binding protein product : Ras-related GTP binding A protein_id : NP_848463.1

name	6230416J20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559772 CCDS:CCDS18307.1 GeneID:230376 MGI:1923389
definition	codon_start : 1 note : likely ortholog of H. sapiens family with sequence similarity 29, member A (FAM29A) product : hypothetical protein LOC230376 protein_id : NP_775576.2

name	LOC100040388 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252600 GeneID:100040388
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474643.1

name	Adfp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116235489 CCDS:CCDS18308.1 GeneID:11520 MGI:87920
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005811 - lipid particle [Evidence IDA]; GO:0016020 - membrane [Evidence TAS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0015909 - long-chain fatty acid transport [Evidence IDA]; GO:0019915 - sequestering of lipid [Evidence IDA] codon_start : 1 note : adipophilin product : adipose differentiation related protein protein_id : NP_031434.3

name	Dennd4c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486610 GeneID:329877 MGI:1914769
definition	codon_start : 1 note : likely ortholog of H. sapiens chromosome 9 open reading frame 55 (C9orf55) product : DENN/MADD domain containing 4C protein_id : NP_001074483.1

name	Rps6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677809 CCDS:CCDS18310.1 GeneID:20104 MGI:98159
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0042593 - glucose homeostasis [Evidence IDA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein S6 protein_id : NP_033122.1

name	Asah3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314858 CCDS:CCDS18311.1 GeneID:230379 MGI:1920932
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO:0000139 - Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0017040 - ceramidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA] GO_process : GO:0006672 - ceramide metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 note : cancer related gene-liver 1; ceramide hydrolase; cancer related gene-liver 1 (CRG-L1) product : alkaline ceramidase 2 protein_id : NP_647467.1

name	Slc24a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369563 CCDS:CCDS18312.1 GeneID:76376 MGI:1923626
definition	codon_start : 1 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 protein_id : NP_766014.1

name	LOC668052 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668052
definition	number : 2 pseudo : _no_value

name	LOC668052 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668052
definition	number : 1 pseudo : _no_value

name	EG624685 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149252611 GeneID:624685 MGI:3645185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG624685 transcript_id : XR_035266.1

clone name	MSMg01-063B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-391F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-193G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-470P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440A03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-455E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450M23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335H01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-157C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-053C20.b	B6Ng01-053C20.g
ACC	DH876302	DH876303
length	274	1,146
definition	DH876302\|Mus musculus domesticus DNA, BAC clone: B6Ng01-053C20, 5' end.	DH876303\|Mus musculus domesticus DNA, BAC clone: B6Ng01-053C20, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	tgtgacctcttttttttttcttttattggatattttatttatttacattt caaatgttatcccctttcctggtttcccctccagaaacccttgaaagggc attaaaatgcagccactcctctcccttctcttcctgctgctgctgaagat caaacttgctctaaggaattcaatgcctctagtcagcagaaagtagcata atgatattgatgctcccttcctctcctaaccttctttctctcctacctag tgttgggggctgggggtaggaagg	gaattctctttctgcttaagatggctttgagcatttaggctcttgtgtgc ttccatgtgaatttgaggattttttttcctagttctgtaaaaaatatcat tggattttagtaagattgctggcttcatggtgttaattctgccaacccat gagcatgggaaatcttcccattttctagtactttctagtgtcttcttcaa tgtctttctagtgccttcttcaatgtctttcttccgagttttaaagttat cattgtaaaagtcttttaccttcttggttagatttgttcctggactgttt gtttgtagtgatattttttgtagtggatggtattaccttttaataatttc ttcctcaacattttattaattaatatatagcaaagttactgatttccttt tgtgttgattttgtatcctgctattttcttgaagagcttatcagaactaa aagttttctggtggaatatttagggcatttcaactgtaggctcctgtcac ctgaaaattaagataatttgactttattcctattttttaatagttaaatt cttacctggttttgtatcaggtggtgctatgaatgggtttctattttatg ggacactttgaggggtgtcagcattgggtcttctttgagggaaggtctgg taggacacaacagtaaattcattaagtcctgaactagtttttgctattag acttcattactgttccaatcgtgttggttgttttggatctatttactttg tttgcatcttcttgattttaatttggtaggttgtatgtgtctaggagttt atccattttctactaaaagtcccagtttgcttagactatgaatattcaaa atatttgctaatccctcacatcccattagaatctattataacctcctttt tcgctccaatttattatttgggttctctcagattggctgaaaattgatgc tgtgtcttgtttttttaaatcaagcaccaagtcttgagttgcaactatgc aaatgataaaggcatcattactcctctcttctactcgcactcgaatcatt gtggaaaagattcaaatatcacagaattaaccccaagggatctagtgttt gtcagaaaggagctactccgtgcgatgtgagagctttcaatatctc
quality values	Open. Hide. 49 37 47 61 49 49 61 49 61 55 59 61 61 61 61 61 61 61 59 28 22 23 22 19 18 39 44 30 26 43 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 59 61 61 61 61 59 61 61 61 61 61 59 59 52 52 43 41 43 44 55 59 59 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 61 61 61 59 59 49 59 61 59 61 61 61 59 61 61 59 59 59 61 59 59 44 55 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 59 61 61 61 59 61 61 61 59 59 61 61 59 59 61 61 52 61 61 61 59 59 61 52 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 55 43 52 61 52 55 61 55 61 61 61 61 61 61 55 55 61 61 61 61 61 55 55 61 61 61	Open. Hide. 50 47 38 39 61 61 16 24 11 18 22 13 15 14 18 55 59 52 59 52 59 59 61 61 59 61 59 59 59 61 52 59 59 61 61 61 59 52 61 61 61 61 61 59 61 59 61 59 59 59 52 44 49 44 23 41 52 59 59 61 59 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 59 61 61 59 61 59 59 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 59 59 59 59 59 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 61 59 59 61 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 52 61 61 61 43 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 39 55 55 61 61 61 61 61 55 61 61 61 55 61 50 61 61 61 50 61 50 61 47 35 61 61 61 43 61 53 61 37 43 61 61 61 47 61 47 52 53 52 45 61 61 61 50 50 61 50 50 61 50 43 53 61 61 61 61 50 33 50 61 61 14 43 47 47 34 53 61 40 61 52 61 61 61 35 38 22 53 61 45 61 24 23 21 6 15 24 52 47 35 33 27 40 47 61 37 24 47 33 61 39 30 52 52 50 53 61 52 42 53 53 53 61 34 61 61 34 42 39 45 42 43 45 50 53 34 53 53 50 38 42 43 39 43 57 57 57 57 36 31 50 42 45 33 40 28 53 45 50 42 45 17 16 47 40 40 45 53 21 39 52 36 22 30 40 50 24 40 45 34 47 38 32 42 40 53 21 57 53 53 47 10 38 29 53 37 45 53 57 38 33 45 30 57 6 18 36 53 29 37 30 25 45 38 52 20 31 36 36 31 28 17 53 45 10 29 20 18 47 37 53 35 24 36 9 37 41 30 47 11 45 33 52 38 32 19 41 30 47 29 31 32 9 39 53 37 13 29 41 53 17 17 57 53 33 40 39 23 31 30 11 45 37 26 17 33 42 53 20 16 24 23 32 36 23 16 14 7 8 8 11 15 30 30 22 20 22 23 31 27 52 6 14 25 53 30 19 11 24 23 23 23 20 34 23 31 33 27 37 36 36 23 28 28 35 25 30 24 53 19 23 20 30 31 13 18 53 25 37 19 27 13 31 32 24 33 37 40 53 24 30 27 33 53 40 47 13 26 10 37 16 30 20 20 15 16 32 24 17 24 8 21 14 33 21 21 45 30 33 9 23 19 34 24 31 31 9 40 14 28 30 20 11 19 20 29 29 23 8 21 9 9 24 15 18 14 11 23 25 19 15 5 5 9 7 8 23 29 31 36 30 37 5 37 26 29 28 30 7 20 20 15 16 47 10 10 6 22 8 7 14 23 22 11 15 12 26 21 18 12 18 29 18 11 13 15 29 21 15 8 4 17 23 20 7 9 16 21 10 12 7 11 12 29 29 13 10 8 10 12 18 10 6 12 17 20 12 8 20 10 21 13 6 21 22 10 10 32 8 36 16 9 20 5 9 10 23 22 16 12 7 10 15 31 6 7 18 17 10 7 20 15 5 16 9 15 17 6 11 10 14 11 5 5 14 7 8 29 32 30 6 10 15 31 9 26 10 12 19 6 5 7 7 10 10 21 6 7 10 12 6 16 19 7 8 9 19 9 11 3 7 9 13 14 5 5 7 6 16 6 19 8 16 6 20 7 6 8 9 4 4 18 24 11 9 4 8 8 5 9 13 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_86061566_86061998
seq2: B6Ng01-053C20.b_57_321 (reverse)

seq1  CCTTCCTACCCCCAGCCACTGGCCCTGCCTTTTAGCTCGTCATTTAGCAC  50
      |||||||||||||||||     |||                    | |||
seq2  CCTTCCTACCCCCAGCC-----CCC--------------------AACAC  25

seq1  CATGCAGGGAGAGGTGGGATTCCAGGAGTACAGCTACCCATAGGCACCTA  100
       | | | ||||||   | |    |||||   |         ||| | | |
seq2  TAGGTA-GGAGAGAAAGAAGGTTAGGAGAGGA---------AGGGAGC-A  64

seq1  TCCACCATGCTGGAAATATCCTTGGAGTGGGCCTCTGCTTTCAGCCCTAC  150
      ||            |||||| |           | ||         ||||
seq2  TC------------AATATCAT-----------TATG---------CTAC  82

seq1  TTTATCTCCTCACCACTCAGCTAGCTGGTGGCTACCTGGACTTAAGTCCT  200
      |||                     ||| || |||   | | | || ||||
seq2  TTT---------------------CTGCTGACTAGAGGCATTGAATTCCT  111

seq1  GAGCGTGATCAGTAAAGACATTACTTCCCCTTGGTCTTGTGGAGGCTCAA  250
       ||       || ||               ||| ||||  | ||      
seq2  TAG-------AGCAA-------------GTTTGATCTTCAGCAG------  135

seq1  TGCCCCATCATGGGGGATTCTAGGGCAATGGGTGGGTGAGGCGGGGGAGC  300
           || ||    |||    || | |      ||| |||| | |   ||
seq2  -----CAGCA----GGA----AGAGAA------GGGAGAGGAGTG---GC  163

seq1  TCCCTCATAGAAGCAGGGGCAGGAGAGATGGGATGT--GGGGATTACAGA  348
      | | |  ||                  |||   | |   ||| ||   ||
seq2  TGCATTTTA------------------ATGCCCTTTCAAGGGTTTCTGGA  195

seq1  GGGGAAACTGGGAAAGGTGATAACATTGGAAATGTAAATAAATAAAATAA  398
      ||||||||  ||||||| ||||||||| ||||||||||||||||||||| 
seq2  GGGGAAACCAGGAAAGGGGATAACATTTGAAATGTAAATAAATAAAATAT  245

seq1  CCAATAAGAAATATGTTAAAAGAAGAAAAAAAAAA  433
      |||||||               |||||||||||||
seq2  CCAATAA---------------AAGAAAAAAAAAA  265

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information