BAC Information

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BAC

Clone NameB6Ng01-053E16
Chromosome4 (Build37)
Map Location 91,223,706 - 91,224,438
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
Downstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053E16.bB6Ng01-053E16.g
ACCDH876382DH876383
length1,049735
definitionDH876382|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E16, 5' end.DH876383|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacacatgtacacaatatagttcactcacatttatccccaattc
ctttcacatccacccccaactttatgtcctattttatttttataacatcc
tgagtccattttcctccatttatttatttatttatttatttatttattta
acatcctgatcagagcctcaccttttcccagttctcccctcacacagtcc
ctctccctcttctcctctaaggaaaatatcccgctgggtaccaatacccc
ctggcatagtaagtcactgaaggactctaggcatatcctctcccactgag
ccagacaactcagcccagttaggggaacaagatccacaggcagaaaacag
agataggggcagccccactccagttgttgtgggacctgcatgaagatcaa
gctgtacatctgctatataagtacaaggggactaggtccagcccatgtat
gcttgttggttggtgtggttcagtctctgggtggttcagactctatcggt
cttcttgtggagtccctattccctctgggtcattcatttcttccccaaac
acatccacaagtcttccagagttccatgtcatgtttggctgtggatccct
gcatctgttttggtcagctgctggttatatgctctcagaagacagttctg
ttaggctcttgcctgaaaccttaacaaaatatcattactagaatcaggaa
ttggttcttggccatgggatgggtctcaagttcagccagtcattgtttga
ccatttccttagcctctgttctgtctttgtccctgcacttcttataggca
ggacaaatatttgggttgacagtttttgtgggatggcatacttgttctta
tcccttctgtcctgcctggctacgggaggtggccatttagattccatatc
tcccactgccaggattctcagctagaatcaccatatagacttctatagcc
tcccccatgccaggtctctggattgtcctaaattgcacctccccaaacca
catctagtttctgtttcattctttcagcctcttctcctgccttccctaa
gaattcctgaggtaatggagatggggatggtatgtagagctccgaggagg
cagagagattaacttgagtctacccagctcctttgactatgcagcctgta
ggaaatgacaaagcacttttaggctgagtgctgctggagtctacagattt
agttttaaaaagcgaacaaagcatcatggtcaagctgatgcaataatttt
gcaatccagtgagctgttaggctcgagaaaaggaaggcattagctaaatg
caatctggaatggacacattaattggcaaagctgctatccctaaacacga
ataaagaattggatgatttttaactcagatagatgttagtccaagctaaa
aatctgtagactgcacagctttaaaaaaatagaagcaagtcacactagga
ataacagggtagtaaaggaagggaggaaagatttaaaatgattaaaaaga
aaaaaaaaaagaactacttgatttaatgtatgtagatgaaagctgtggac
cattgcttcccatgagacctcacagtggattgccactgatggcaagtctc
agaaaactaaggacaaacttgcagctgggtccctggctggctctgcctct
aacagcctttctcagtgggatggcaggattaggggaggagctgatggcat
aatggaaactgtgcttgcctaggctgactgtgctcctgatctgaacccta
gtattgggggtgacagctgcttttttaacctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91223706_91224438
seq2: B6Ng01-053E16.g_69_803

seq1  GAATTCCTGAGGTAATGGAGATGGGGATGGTATGTAGAGCTCCGAGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGGTAATGGAGATGGGGATGGTATGTAGAGCTCCGAGGAGG  50

seq1  CAGAGAGATTAACTTGAGTCTACCCAGCTCCTTTGACTATGCAGCCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGATTAACTTGAGTCTACCCAGCTCCTTTGACTATGCAGCCTGTA  100

seq1  GGAAATGACAAAGCACTTTTAGGCTGAGTGCTGCTGGAGTCTACAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGACAAAGCACTTTTAGGCTGAGTGCTGCTGGAGTCTACAGATTT  150

seq1  AGTTTTAAAAAGCGAACAAAGCATCATGGTCAAGCTGATGCAATAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAAAGCGAACAAAGCATCATGGTCAAGCTGATGCAATAATTTT  200

seq1  GCAATCCAGTGAGCTGTTAGGCTCGAGAAAAGGAAGGCATTAGCTAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCAGTGAGCTGTTAGGCTCGAGAAAAGGAAGGCATTAGCTAAATG  250

seq1  CAATCTGGAATGGACACATTAATTGGCAAAGCTGCTATCCCTAAACACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGGAATGGACACATTAATTGGCAAAGCTGCTATCCCTAAACACGA  300

seq1  ATAAAGAATTGGATGATTTTTAACTCAGATAGATGTTAGTCCAAGCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAATTGGATGATTTTTAACTCAGATAGATGTTAGTCCAAGCTAAA  350

seq1  AATCTGTAGACTGCACAGCTTTAAAAAAATAGAAGCAAGTCACACTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTAGACTGCACAGCTTTAAAAAAATAGAAGCAAGTCACACTAGGA  400

seq1  ATAACAGGGTAGTAAAGGAAGGGAGGAAAGATTTAAAATGATTAAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGGGTAGTAAAGGAAGGGAGGAAAGATTTAAAATGATTAAAAAGA  450

seq1  AAAAAAAAAAGAACTACTTGATTTAATGTATGTAGATGAAAGCTGTGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGAACTACTTGATTTAATGTATGTAGATGAAAGCTGTGGAC  500

seq1  CATTGCTTCCCATGAGACCTCACAGTGGATTGCCACTGATGGCAAGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTCCCATGAGACCTCACAGTGGATTGCCACTGATGGCAAGTCTC  550

seq1  AGAAAACTAAGGACAAACTTGCAGCTGGGTCCCTGGCTGGCTCTGCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTAAGGACAAACTTGCAGCTGGGTCCCTGGCTGGCTCTGCCTCT  600

seq1  AACAGCCTTTCTCAGTGGGATGGCAGGATTAGGGGAGGAGCTGATGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTTTCTCAGTGGGATGGCAGGATTAGGGGAGGAGCTGATGGCAT  650

seq1  AATGGAAACTGTGCTTGCCTAGGCTGACTGTGCTCCTGATCTGAACCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAACTGTGCTTGCCTAGGCTGACTGTGCTCCTGATCTGAACCCTA  700

seq1  GTATT-GGGGTGACAGCTGC-TTTTTAACCTGTGA  733
      ||||| |||||||||||||| ||||||||||||||
seq2  GTATTGGGGGTGACAGCTGCTTTTTTAACCTGTGA  735