BAC Information

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BAC

Clone NameB6Ng01-053K03
Chromosome4 (Build37)
Map Location 23,640,867 - 23,641,852
singlet/doubletsinglet
Overlap genenone
Upstream gene1700025O08Rik, LOC625462, LOC383998, LOC100040464
Downstream geneLOC623873, LOC664973, F730047E07Rik, Klhl32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053K03.bB6Ng01-053K03.g
ACCDH876627DH876628
length1,186983
definitionDH876627|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K03, 5' end.DH876628|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaaggagctagagaaagtagccaaggagctaaaggcatctgcaaccc
tatagtgaacacatatgagctaaccagtaccccggagctctgacttctag
ctgcatatatttcaaagatggcctagtcagccatcactggaaagagaggc
ccatggacttgccaactttatattgccccatacagggaatcacaggccaa
aagggggatgtggtggggcaaggggagtgttgtgct
gaattctgtttagaggtatgtaatacattcttctttatttccagcagcaa
taattttactttgatctcacatccaccgaaccattaaccgtacggcagct
cataagcaaggtacaaggcagcagcgcctgtgatttccaggggaaggtca
tcacccagaattttttttaaataactattacaatgaagaacgggttacag
ccacaaaaggaatggttataatttatgcctgacttacttcagcagaatat
agtttatttataaactgcttatggcaaactctgtatgcccctgttctatg
catgtgctgaactgtcttctggtaaattatttaaattacacctagcagta
attcctgaggactttcatacttcattttctctattaatgtaacagggaaa
agctgctttgcagggattgctctaaattcccagagtgtgagttccagact
ctgtatgtgttgcattaagcctgtcaaaaaatgtgtcttcccccgaaatt
tattactgaagtttctctacccgagctactcattgaagccttacggtaaa
gctcatacatgatttaagcagctaacatcattgaaagaaataggtcaggt
ttaaaaaaaaatcctgaatttaagctaccttcacttattacttatgcaag
attatgcataatttagcacactgctgaatctgcaaggacagaataattgt
ttaccaaaatatttactctgagttggtactcatgttttactgagataagg
tgacttcttagcaattgctaatcacttctgaattaaaagacaatgagtag
ggctttgattgggttgatactgcataacagtgggtggaaatagagatctt
gtttaacaactctattgaagtataataccgtggtacacaaggagcagttt
cattaaagtgtcatcttgaaattttttttattttgggttcactctctctc
tctctctctctctctctctctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23640867_23641852
seq2: B6Ng01-053K03.g_67_1049

seq1  GAATTCTGTTTAGAGGTATGTAATACATTCTTCTTTATTTCCAGCAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTAGAGGTATGTAATACATTCTTCTTTATTTCCAGCAGCAA  50

seq1  TAATTTTACTTTGATCTCACATCCACCGAACCATTAACCGTACGGCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTACTTTGATCTCACATCCACCGAACCATTAACCGTACGGCAGCT  100

seq1  CATAAGCAAGGTACAAGGCAGCAGCGCCTGTGATTTCCAGGGGAAGGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCAAGGTACAAGGCAGCAGCGCCTGTGATTTCCAGGGGAAGGTCA  150

seq1  TCACCCAGAATTTTTTTTAAATAACTATTACAATGAAGAACGGGTTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAGAATTTTTTTTAAATAACTATTACAATGAAGAACGGGTTACAG  200

seq1  CCACAAAAGGAATGGTTATAATTTATGCCTGACTTACTTCAGCAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAGGAATGGTTATAATTTATGCCTGACTTACTTCAGCAGAATAT  250

seq1  AGTTTATTTATAAACTGCTTATGGCAAACTCTGTATGCCCCTGTTCTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTATAAACTGCTTATGGCAAACTCTGTATGCCCCTGTTCTATG  300

seq1  CATGTGCTGAACTGTCTTCTGGTAAATTATTTAAATTACACCTAGCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCTGAACTGTCTTCTGGTAAATTATTTAAATTACACCTAGCAGTA  350

seq1  ATTCCTGAGGACTTTCATACTTCATTTTCTCTATTAATGTAACAGGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGAGGACTTTCATACTTCATTTTCTCTATTAATGTAACAGGGAAA  400

seq1  AGCTGCTTTGCAGGGATTGCTCTAAATTCCCAGAGTGTGAGTTCCAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTTGCAGGGATTGCTCTAAATTCCCAGAGTGTGAGTTCCAGACT  450

seq1  CTGTATGTGTTGCATTAAGCCTGTCAAAAAATGTGTCTTCCCCCGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGTTGCATTAAGCCTGTCAAAAAATGTGTCTTCCCCCGAAATT  500

seq1  TATTACTGAAGTTTCTCTACCCGAGCTACTCATTGAAGCCTTACGGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGAAGTTTCTCTACCCGAGCTACTCATTGAAGCCTTACGGTAAA  550

seq1  GCTCATACATGATTTAAGCAGCTAACATCATTGAAAGAAATAGGTCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATACATGATTTAAGCAGCTAACATCATTGAAAGAAATAGGTCAGGT  600

seq1  TTAAAAAAAAATCCTGAATTTAAGCTACCTTCACTTATTACTTATGCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAATCCTGAATTTAAGCTACCTTCACTTATTACTTATGCAAG  650

seq1  ATTATGCATAATTTAGCACACTGCTGAATCTGCAAGGACAGAATAATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCATAATTTAGCACACTGCTGAATCTGCAAGGACAGAATAATTGT  700

seq1  TTACCAAAATATTTACTCTGAGTTGGTACTCATGTTTTACTGAGATAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAAATATTTACTCTGAGTTGGTACTCATGTTTTACTGAGATAAGG  750

seq1  TGACTTCTTAGCAATTGCTAATCACTTCTGAATTAAAAGACAATGAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTTAGCAATTGCTAATCACTTCTGAATTAAAAGACAATGAGTAG  800

seq1  GGCTTTGATTGGGTTGATAACTGCATAACAGTGGGTGGAAATAGAGATCT  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCTTTGATTGGGTTGAT-ACTGCATAACAGTGGGTGGAAATAGAGATCT  849

seq1  TGTTTAACAACTCTATTGAAGTATAATACCGTGGTACACAAGGAGCAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACAACTCTATTGAAGTATAATACCGTGGTACACAAGGAGCAGTT  899

seq1  TCATTAAAGTTGTCATCTTGAAATTTTTTTTATTTTGGGTTTCACTCTCT  950
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  TCATTAAAG-TGTCATCTTGAAATTTTTTTTATTTTGGG-TTCACTCTCT  947

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  986
      ||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  983