BAC Information

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BAC

Clone NameB6Ng01-053P13
Chromosome4 (Build37)
Map Location 146,898,018 - 146,899,168
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671
Downstream geneLOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053P13.bB6Ng01-053P13.g
ACCDH876854DH876855
length1,1341,066
definitionDH876854|Mus musculus domesticus DNA, BAC clone: B6Ng01-053P13, 5' end.DH876855|Mus musculus domesticus DNA, BAC clone: B6Ng01-053P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactttggactcacacttagttaaatgctctgagggaaaggctt
taatttctttccttaactcagatggattataaatcagcagtatgtttatt
tcatctattcacatatgaaggatcaattaacttgtaacattttttttttg
cacaaatacaatatgggaaaactaaaagtcaccacaatgggaaacaagta
gccctgacatttgaaaggtgtccatgagcacagaaccctgttctttaaag
acagacctccaggtctggacttgtgcttctgagctctcacctccatgctt
agctagaatccattttaacctctcacaatcattacaacagatttttaaac
agattataatgagaatcctggaactcattataatcataaaaagagttgac
ttcctagcaatagtctaatgagacctgggtaaatctcgagtcttctttcc
ccagcttatgctgacatgcatgggtgtacatagagtgttacagtgaacaa
tcaggaaaccatttatgaacaaactgtgcagtatgcattgtaattttgtt
ctagttttctttccttcatactttcttttcatttctttccttttcttttt
ctttttttgacaaaaatctagacaattttcgaaaggagtttctctttagt
gcctgatccttcaagtagtaaataatattgtgccttgacctaacatcatg
ttaattttgtccaagacttataatttctctctgtattatttttatttgcc
ttactgcattttgttttcaggttcttttttttttttcttggttttttgag
acagggattctctgtatagccctggcttttgggaactcactcagtagacc
aggttggccttgaactcagaaatccccctgcctctgcctcccagacatat
tcaccacacccagcctttttttttggtgggggggcattctaagcacctat
tgaactcaatttaatatttatagtgttctcattttctttcaggcatctgg
tgttatttcttcccatgatcatttgttcctatctgagtggatttacatgg
ttacaactttatctcctgggtcatactatgggattcatttattctgggat
atcatgtaactggcctcttatagaatacattatg
gaattcttgggcaccgctgggttctgcagactttggatacctgggtttgc
aacactggctgcccccctgtaccccctgaccaaggaaagtggagaattta
gatggacatcagaacatcagaaagcctttgaaaatattaagaaggccctg
ctgactgcgtcagctttggcactgccagatctaaccaagcccttcatcct
ctatgttgatgagagggcgggggtggccagaggagttcttactcaggctc
taggaccgtggaagaggccggtggcatatttgtctaaaaagctggaccca
gtggccagcggatggcccacatgtttaaaggccgttgctgcagtagccct
actcgttaaggatgctgacaaattaactctgggacagcaaataactgtgg
tagccccccactctcttgaaagcattatccgtcagcccccagaccgatgg
atgacaaatgcccggatgactcactatcagagtctgctgctgactgaacg
ggtcgtgtttgctccccccgctattctcaaccctgccaccttcctccctg
aaacggatgattcctcacccgttcactgctgtgcagacatccttgcggag
gaaattgggatccgaagtgatctacgtgaccagccgtggccaggtgttcc
aaactggtacacagatggaagcagttttcctagtagaaggtaagaggatg
gcaggggcagcggtggtagatggtaagcgagtcgtgtgggctggcagcct
gccagaaggtacgtcagctcaaaaagctgaattaattgccctgacccagg
cccttcggatggctgagggggcagtccatcaacatttacaccgatagcag
gtatgcttttgctacagcccacgtccacggtgccatctattagccataga
gggttgctgaccgtccgcaggcaaggacattaaaaaacaaagaagagatt
ttgagccttcttgaggttattcttctgcttgccaaagtggccatatacat
tgtccctgaacatcaaaagacacgatgctgtgacaggggaaatatattgc
tgatgttaagcttacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146898018_146899168
seq2: B6Ng01-053P13.b_43_1176

seq1  GAATTCAACTTTGGACTCACACTTAGTTAAATGCTCTGAGGGAAAGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTGGACTCACACTTAGTTAAATGCTCTGAGGGAAAGGCTT  50

seq1  TAATTTCTTTCCTTAACTCAGATGGATTATAAATCAGCAGTATGTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTTTCCTTAACTCAGATGGATTATAAATCAGCAGTATGTTTATT  100

seq1  TCATCTATTCACATATGAAGGATCAATTAACTTGTAACATTTTTTTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATTCACATATGAAGGATCAATTAACTTGTAACATTTTTTTTTTG  150

seq1  CACAAATACAATATGGGAAAACTAAAAGTCACCACAATGGGAAACAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATACAATATGGGAAAACTAAAAGTCACCACAATGGGAAACAAGTA  200

seq1  GCCCTGACATTTGAAAGGTGTCCATGAGCACAGAACCCTGTTCTTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGACATTTGAAAGGTGTCCATGAGCACAGAACCCTGTTCTTTAAAG  250

seq1  ACAGACCTCCAGGTCTGGACTTGTGCTTCTGAGCTCTCACCTCCATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCTCCAGGTCTGGACTTGTGCTTCTGAGCTCTCACCTCCATGCTT  300

seq1  AGCTAGAATCCATTTTAACCTCTCACAATCATTACAACAGATTTTTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAATCCATTTTAACCTCTCACAATCATTACAACAGATTTTTAAAC  350

seq1  AGATTATAATGAGAATCCTGGAACTCATTATAATCATAAAAAGAGTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATAATGAGAATCCTGGAACTCATTATAATCATAAAAAGAGTTGAC  400

seq1  TTCCTAGCAATAGTCTAATGAGACCTGGGTAAATCTCGAGTCTTCTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCAATAGTCTAATGAGACCTGGGTAAATCTCGAGTCTTCTTTCC  450

seq1  CCAGCTTATGCTGACATGCATGGGTGTACATAGAGTGTTACAGTGAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTATGCTGACATGCATGGGTGTACATAGAGTGTTACAGTGAACAA  500

seq1  TCAGGAAACCATTTATGAACAAACTGTGCAGTATGCATTGTAATTTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAACCATTTATGAACAAACTGTGCAGTATGCATTGTAATTTTGTT  550

seq1  CTAGTTTTCTTTCCTTCATACTTTCTTTTCATTTCTTTCCTTTTCTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTCTTTCCTTCATACTTTCTTTTCATTTCTTTCCTTTTCTTTTT  600

seq1  CTTTTTTTGACAAAAATCTAGACAATTTTCGAAAGGAGTTTCTCTTTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTGACAAAAATCTAGACAATTTTCGAAAGGAGTTTCTCTTTAGT  650

seq1  GCCTGATCCTTCAAGTAGTAAATAATATTGTGCCTTGACCTAACATCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATCCTTCAAGTAGTAAATAATATTGTGCCTTGACCTAACATCATG  700

seq1  TTAATTTTGTCCAAGACTTATAATTTCTCTCTGTATTATTTTTATTTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGTCCAAGACTTATAATTTCTCTCTGTATTATTTTTATTTGCC  750

seq1  TTACTGCATTTTGTTTTCAGGTTCTTTTTTTTTTTTCTTGGTTTTTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCATTTTGTTTTCAGGTTCTTTTTTTTTTTTCTTGGTTTTTTGAG  800

seq1  ACAGGGATTCTCTGTATAGCCCTGGCTTTTGGGAACTCACTCAGTAGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGATTCTCTGTATAGCCCTGGCTTTTGGGAACTCACTCAGTAGACC  850

seq1  AGGTTGGCCTTGAACTCAGAAATCCCCCTGCCTCTGCCTCCCAAGACATA  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGTTGGCCTTGAACTCAGAAATCCCCCTGCCTCTGCCTCCC-AGACATA  899

seq1  TTCACCACACCCAGCCTTTTTTTTTGGTGGGGGGGCAATTCTAAGCACCT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCACCACACCCAGCCTTTTTTTTTGGTGGGGGGGC-ATTCTAAGCACCT  948

seq1  ATTGAACTCAATTTTAATATTTTATAGTGTCCTCA-TTTCCTTCAGGCAT  999
      ||||||||||| ||||||| |||||||||| |||| |||| |||||||||
seq2  ATTGAACTCAA-TTTAATA-TTTATAGTGTTCTCATTTTCTTTCAGGCAT  996

seq1  CTGGTGTTATTTTCTTTCCCATGATTCATTTTGTTCCTATCTGAGTGGAT  1049
      ||||||||||||   ||||||||| ||| |||||||||||||||||||||
seq2  CTGGTGTTATTT--CTTCCCATGA-TCA-TTTGTTCCTATCTGAGTGGAT  1042

seq1  TTACATGGTTTACAAACTTTAATCTCCTTGGTCATTACTATGGATTTTCA  1099
      |||||||| |||| |||||| ||||||| ||||| ||||||||   ||||
seq2  TTACATGG-TTAC-AACTTT-ATCTCCTGGGTCA-TACTATGG-GATTCA  1087

seq1  ATTTTTATCTTGGATATCATGTAAACTGTGCTCCTTATAGAATACATATA  1149
        |||  ||| ||||||||||| ||||| ||  |||||||||||||| ||
seq2  --TTTATTCTGGGATATCATGT-AACTG-GCCTCTTATAGAATACAT-TA  1132

seq1  TG  1151
      ||
seq2  TG  1134