BAC Information

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BAC

Clone NameB6Ng01-054C18
Chromosome4 (Build37)
Map Location 90,175,486 - 90,176,558
singlet/doubletsinglet
Overlap genenone
Upstream geneDmrta1, Zfp352, LOC619842, LOC435792
Downstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054C18.bB6Ng01-054C18.g
ACCDH876996DH876997
length1,0671,252
definitionDH876996|Mus musculus domesticus DNA, BAC clone: B6Ng01-054C18, 5' end.DH876997|Mus musculus domesticus DNA, BAC clone: B6Ng01-054C18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggtttattgtttttctcattccacaagggaacagatgattta
tttatttttgttgacatgatgttggttttgttttattcatgtcctacctg
ttaggtttcagacctgagacaagggactgaggtgcatattttacaccaaa
gcagacctggcctccagattctcccagcatccctcagtccctacctggca
caccccatttctagacctgaactttccagcccaggggttggactgccctc
tccccatagggtcttctctatatagtctagacattttggtctccttgctg
cgctctctctctctctctctctctctctctctctctctgcctctctctct
ctctctctctgtctgtctctctgcctctctctctctctctctgtctctct
ctctctctttccttctactcctcctcttcttcttccttcctcaaggcttg
aattggctcattttactgatggagaaataacttattaccaatgcctgtaa
gtcttcttcatatacagtaacaaactcaataaacattactagatttaaat
gttttcagagtttaaagccatgaaaagtgaaaggaatggttttatccttc
atcaatagcccacacatatcactcttccccaagccagtagtcctttcttg
ggcaaatactcctcttatataaaagactctttctacatacacatctcaga
atttctctaagaaataatagggaatctgagactacttaatcattcaatga
atacaatttattctttgatctgtattcactgtaaatcaagtttaaaaagt
taaattacatatgttaccttgagtctgttctaaatagcatagtccttctg
gactttccacagaaaatccttgcattgttcatcagaaagccacaaaatgt
catagcatgtatggttattttactgaactcccccaccgccaccctaccat
agtctatttggacacttagtctcaagtaggagcactttttgggaagttta
agagtatgattgtgatggaggaggcatatccttggaagaagtctttgagg
gtcaaacctggtgtctt
gaattcattgcaagcatcttccacataacatgaaaaaaaatctagaaatg
agtgaatttctaaagtcatataacggatgaaaaggttaatctgaccagtg
ccatacaaggaagttgaaacaataattaaaaattcccctaaaagtaaaag
cttaaaaatagatgaaatcactgctaaattacacagggataaaagaaatt
ggacaccaatactttaaacttttcccaccaaataggaaagaaggaatact
attaaattcatttggtgaagccagttgaccagacacccaaactggaaaat
ctcaaaacaatattttccttatgaaacacggataaaaattgtcaacaaat
actgacaagtggaattcaaagcacataaacaaatcatataggactgaaga
gatacctaagcagctgagagtaccttctcttccaggcggcctgggttaga
ttcccagccaggttttaatgtcagttttaggaagtccttttctggacttt
gtggatactttatgcatgtgatatacaaatatatatggaggcaaaattac
aaaaacatgtaaaataaaacttcaaaaaggttactctattatgaccaatt
gctttcatcctaaatgtaggagctggtccactgtacaatagtcaaaaata
taattcatcatataaataagcttagtgatagagaccacatgacagtttca
gtagatgcaaagaggcaatttgacaaaatttcgcatgctttcacgtaaaa
cccttgaagaaaataggaataagatacctcaaaataagaaaggtagtatg
tgagaaatgaataataaaagacatgccagcagaagcaataaagcataata
acaaataagattaaaaataagaagtaataatcaaaataatcctaattcag
gatgatatgattgtatacttaaagatacataaaattattaacttctatac
ataacataatgaactttctgagaaagaagctattaaagtgacctgttaca
ttactcaaatgcatatatacaaccttggaataaatataatgaggatttca
aacttttcagtggaaaccttatgaaagtatgatgaattgttatataaaag
gcttcatactctgactggccaaattattttgtaaaatggctatgaattca
aatatctatacctcattattccaatcaagaattcgaatgataacagtcat
ttatcaaataaaggtcttgaatctaagcactttaatgttggaataacaac
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90175486_90176558
seq2: B6Ng01-054C18.b_43_1109

seq1  GAATTCTTGGTTTATTGTTTTTCTCATTCCACAAGGGAACAGATGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTTTATTGTTTTTCTCATTCCACAAGGGAACAGATGATTTA  50

seq1  TTTATTTTTGTTGACATGATGTTGGTTTTGTTTTATTCATGTCCTACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTGTTGACATGATGTTGGTTTTGTTTTATTCATGTCCTACCTG  100

seq1  TTAGGTTTCAGACCTGAGACAAGGGACTGAGGTGCATATTTTACACCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTCAGACCTGAGACAAGGGACTGAGGTGCATATTTTACACCAAA  150

seq1  GCAGACCTGGCCTCCAGATTCTCCCAGCATCCCTCAGTCCCTACCTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCTGGCCTCCAGATTCTCCCAGCATCCCTCAGTCCCTACCTGGCA  200

seq1  CACCCCATTTCTAGACCTGAACTTTCCAGCCCAGGGGTTGGACTGCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCATTTCTAGACCTGAACTTTCCAGCCCAGGGGTTGGACTGCCCTC  250

seq1  TCCCCATAGGGTCTTCTCTATATAGTCTAGACATTTTGGTCTCCTTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATAGGGTCTTCTCTATATAGTCTAGACATTTTGGTCTCCTTGCTG  300

seq1  CGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCTCTCTCT  350

seq1  CTCTCTCTCTGTCTGTCTCTCTGCCTCTCTCTCTCTCTCTCTGTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTGTCTGTCTCTCTGCCTCTCTCTCTCTCTCTCTGTCTCTCT  400

seq1  CTCTCTCTTTCCTTCTACTCCTCCTCTTCTTCTTCCTTCCTCAAGGCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTCCTTCTACTCCTCCTCTTCTTCTTCCTTCCTCAAGGCTTG  450

seq1  AATTGGCTCATTTTACTGATGGAGAAATAACTTATTACCAATGCCTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCTCATTTTACTGATGGAGAAATAACTTATTACCAATGCCTGTAA  500

seq1  GTCTTCTTCATATACAGTAACAAACTCAATAAACATTACTAGATTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTCATATACAGTAACAAACTCAATAAACATTACTAGATTTAAAT  550

seq1  GTTTTCAGAGTTTAAAGCCATGAAAAGTGAAAGGAATGGTTTTATCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGAGTTTAAAGCCATGAAAAGTGAAAGGAATGGTTTTATCCTTC  600

seq1  ATCAATAGCCCACACATATCACTCTTCCCCAAGCCAGTAGTCCTTTCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAGCCCACACATATCACTCTTCCCCAAGCCAGTAGTCCTTTCTTG  650

seq1  GGCAAATACTCCTCTTATATAAAAGACTC-TTCTACATACACATCTCAGA  699
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGCAAATACTCCTCTTATATAAAAGACTCTTTCTACATACACATCTCAGA  700

seq1  ATTTCTCTAAGAAATAATAGGGAATCTGAGACTACTTAATCATTCAATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTAAGAAATAATAGGGAATCTGAGACTACTTAATCATTCAATGA  750

seq1  ATACAATTTATTCTTTGATCTGTATTCACTGTAAATCAAGTTTAAAAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTTATTCTTTGATCTGTATTCACTGTAAATCAAGTTTAAAAAGT  800

seq1  T-AATTACAAATGTTACCTTGAGTCTGTTCTAAATAGCATAGTCCTTCTG  848
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACATATGTTACCTTGAGTCTGTTCTAAATAGCATAGTCCTTCTG  850

seq1  GACTTTCCACAGAGAATCCTTGCATTGTTTCATCAGAAAGCCAACAAAAT  898
      ||||||||||||| ||||||||||||| |||||||||||||| |||||||
seq2  GACTTTCCACAGAAAATCCTTGCATTG-TTCATCAGAAAGCC-ACAAAAT  898

seq1  GTCATAGCATGTATGGTTATTTTACTGAACTCCCCCCACCGCCACCCTAC  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTCATAGCATGTATGGTTATTTTACTGAACT-CCCCCACCGCCACCCTAC  947

seq1  CATAGTCTATTTGAACACTTAGTCTCAAGTTGGAAGCACTTTTTGGGTAG  998
      ||||||||||||| |||||||||||||||| || ||||||||||||| | 
seq2  CATAGTCTATTTGGACACTTAGTCTCAAGTAGG-AGCACTTTTTGGG-AA  995

seq1  GTTTAGGAGGTATGACTGTGATGGAGGAGGCATATCCTTGGAGGAGGTCT  1048
      ||||| || |||||| |||||||||||||||||||||||||| || ||||
seq2  GTTTAAGA-GTATGATTGTGATGGAGGAGGCATATCCTTGGAAGAAGTCT  1044

seq1  TTGAGGTGTCAAAGCCTGGTGTCTT  1073
      |||||| |||||| |||||||||||
seq2  TTGAGG-GTCAAA-CCTGGTGTCTT  1067