BAC Information

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BAC

Clone NameB6Ng01-055C03
Chromosome4 (Build37)
Map Location 56,895,790 - 57,036,319
singlet/doubletdoublet
Overlap geneD730040F13Rik, 6430704M03Rik, Epb4.1l4b
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1
Downstream genePtpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055C03.bB6Ng01-055C03.g
ACCDH877680DH877681
length1,052292
definitionDH877680|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C03, 5' end.DH877681|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,895,790 - 56,896,847)(57,036,028 - 57,036,319)
sequence
gaattcagtgctgcctcccggccaagaaaacctggatgagctttcccaag
gaaagaaagctaaagtgaaacaagcttagaaagcagttagccaacagtgg
ccagacaacagtagggggtgacagacaggtggcacgcatactacagcagc
cccaagggaagtgccagctcagacccttgtggtgagggtaaagggcaagg
agagattcaaggactggataagggacaggacagcgactgagttaggacac
acactcagggttggtgtgttcagggagacagagcatcaattaaaacagat
cagcttgcaagcctggaactatatatacatagagcaacttaatatttcta
aactatgtcacctaagcatcctggaaaatactaataggttcagaacagta
atgcacaccagcgaagccaggcctggtacatgccttttactcccaggact
ctggagggtcaaacaagtgaacttcagtgagttccaggcgagtcgggcta
cagagggagaccgtgtctcaaaaaaaccagaacagataaagataacacat
gatgtttttatcatgggattcagcacatggtaagtctcagcaaatgttag
aagtgttgtttgtgttacttcttaaacagtggcagataaaacgcacattt
cctttaggcccagaatgcctcaactgggggttggtggggtgaatccaacg
ggcaaccactcagacttagccacctctgaaaagcaagaactccaagccat
tattaggaggagactaaaacaacctaattaattcactgagctaaataccc
aaaaggttcagaagcaggttagactgtgtgctgcctatgagagtggaggg
tggggactgagcagtgacctgctgctcctctgctaagaaagcaccacggc
ccctcgaccaccccggccaacctccacccaaccaagcagctgatccttct
tccttctttccgactcctagctttcctctggagaggatgagtttggacta
ggacacaggcagagatgtgagtggtggctgtgtactagcacaggtactac
ac
ccttttgggccccagctgtggctcaggcgacatgcctgggtgtgaagcgt
gtcagagaactacagaggaatctctgggcacaacgggaactgtgggcagt
ctggggttctggtctgtttgtagctctgagatcctgagaaacaaaaatga
atactatgaaccagtctttacttctttttccattttcgtgtgtgtgtgtg
tgtgtgtgtgtgcgcgcgcgcgcgcgcacgcgtgcatccgcacatgtatt
ttcaggatgggaattgatatctggaatccaccttattcattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56895790_56896847
seq2: B6Ng01-055C03.b_50_1101

seq1  GAATTCAGTGCTGCCTCCCGGCCAAGAAAACCTGGATGAGCTTTCCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCTGCCTCCCGGCCAAGAAAACCTGGATGAGCTTTCCCAAG  50

seq1  GAAAGAAAGCTAAAGTGAAACAAGCTTAGAAAGCAGTTAGCCAACAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGCTAAAGTGAAACAAGCTTAGAAAGCAGTTAGCCAACAGTGG  100

seq1  CCAGACAACAGTAGGGGGTGACAGACAGGTGGCACGCATACTACAGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAACAGTAGGGGGTGACAGACAGGTGGCACGCATACTACAGCAGC  150

seq1  CCCAAGGGAAGTGCCAGCTCAGACCCTTGTGGTGAGGGTAAAGGGCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGGAAGTGCCAGCTCAGACCCTTGTGGTGAGGGTAAAGGGCAAGG  200

seq1  AGAGATTCAAGGACTGGATAAGGGACAGGACAGCGACTGAGTTAGGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCAAGGACTGGATAAGGGACAGGACAGCGACTGAGTTAGGACAC  250

seq1  ACACTCAGGGTTGGTGTGTTCAGGGAGACAGAGCATCAATTAAAACAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGGGTTGGTGTGTTCAGGGAGACAGAGCATCAATTAAAACAGAT  300

seq1  CAGCTTGCAAGCCTGGAACTATATATACATAGAGCAACTTAATATTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGCAAGCCTGGAACTATATATACATAGAGCAACTTAATATTTCTA  350

seq1  AACTATGTCACCTAAGCATCCTGGAAAATACTAATAGGTTCAGAACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTCACCTAAGCATCCTGGAAAATACTAATAGGTTCAGAACAGTA  400

seq1  ATGCACACCAGCGAAGCCAGGCCTGGTACATGCCTTTTACTCCCAGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACCAGCGAAGCCAGGCCTGGTACATGCCTTTTACTCCCAGGACT  450

seq1  CTGGAGGGTCAAACAAGTGAACTTCAGTGAGTTCCAGGCGAGTCGGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGTCAAACAAGTGAACTTCAGTGAGTTCCAGGCGAGTCGGGCTA  500

seq1  CAGAGGGAGACCGTGTCTCAAAAAAACCAGAACAGATAAAGATAACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGAGACCGTGTCTCAAAAAAACCAGAACAGATAAAGATAACACAT  550

seq1  GATGTTTTTATCATGGGATTCAGCACATGGTAAGTCTCAGCAAATGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTATCATGGGATTCAGCACATGGTAAGTCTCAGCAAATGTTAG  600

seq1  AAGTGTTGTTTGTGTTACTTCTTAAACAGTGGCAGATAAAACGCACATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGTTTGTGTTACTTCTTAAACAGTGGCAGATAAAACGCACATTT  650

seq1  CCTTTAGGCCCAGAATGCCTCAACTGGGGGTTGGTGGGGTGAATCCAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGGCCCAGAATGCCTCAACTGGGGGTTGGTGGGGTGAATCCAACG  700

seq1  GGCAACCACTCAGACTTAGCCACCTCTGAAAAGCAAGAACTCCAAGCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACCACTCAGACTTAGCCACCTCTGAAAAGCAAGAACTCCAAGCCAT  750

seq1  TATTAGGAGGAGACTAAAACAACCTAATTAATTCACTGAGCTAAATACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGAGGAGACTAAAACAACCTAATTAATTCACTGAGCTAAATACCC  800

seq1  AAAAGGTTCAGAAGCAGGTTAGACTGTGTGCTGCCTATGAGAGTGGAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTCAGAAGCAGGTTAGACTGTGTGCTGCCTATGAGAGTGGAGGG  850

seq1  T-GGGACTGAGCAGTGACCTGCTGCTCCTCTGCTAAGAAAGCACCACGGC  899
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGGGACTGAGCAGTGACCTGCTGCTCCTCTGCTAAGAAAGCACCACGG-  899

seq1  CCCCTCGACCACCCCGGCCAACCTCCACCCAACCAAGCAGCTGATCCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCGACCACCCCGGCCAACCTCCACCCAACCAAGCAGCTGATCCTTC  949

seq1  TTCCTTCTTTCCGACTCCTAGCTTTCCTCTGGAGAAGGGAATGAGTTTTG  999
      |||||||||||||||||||||||||||||||||||   | ||||| ||||
seq2  TTCCTTCTTTCCGACTCCTAGCTTTCCTCTGGAGA---GGATGAG-TTTG  995

seq1  GACTAGGAACAACAGGCAGAGATGTGAGT-GTGGCTGTGTACTAGCACAG  1048
      ||||||||   |||||||||||||||||| ||||||||||||||||||| 
seq2  GACTAGGA--CACAGGCAGAGATGTGAGTGGTGGCTGTGTACTAGCACA-  1042

seq1  GGTACTACAC  1058
      ||||||||||
seq2  GGTACTACAC  1052

seq1: chr4_57036028_57036319
seq2: B6Ng01-055C03.g_75_366 (reverse)

seq1  CAGTGAATAAGGTGGATTCCTGATATCAATTCCCATCCTGTAAATACATG  50
      || ||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  CAATGAATAAGGTGGATTCCAGATATCAATTCCCATCCTGAAAATACATG  50

seq1  TGTGGATGCACGCGTGCGCGCGCGCGCGCGCACACACACACACACACACA  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGATGCACGCGTGCGCGCGCGCGCGCGCACACACACACACACACACA  100

seq1  CACACGAAAATGGAAAAAGAAGTAAAGACTGGTTCATAGTATTCATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGAAAATGGAAAAAGAAGTAAAGACTGGTTCATAGTATTCATTTTT  150

seq1  GTTTCTCAGGATCTCAGAGCTACAAACAGACCAGAACCCCAGACTGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCAGGATCTCAGAGCTACAAACAGACCAGAACCCCAGACTGCCCA  200

seq1  CAGTTCCCGTTGTGCCCAGAGATTCCTCTGTAGTTCTCTGACACGCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCGTTGTGCCCAGAGATTCCTCTGTAGTTCTCTGACACGCTTCA  250

seq1  CACCCAGGCATGTCGCCTGAGCCACAGCTGGGGCCCAAAAGG  292
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGCATGTCGCCTGAGCCACAGCTGGGGCCCAAAAGG  292