BAC Information

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BAC

Clone NameB6Ng01-055G01
Chromosome4 (Build37)
Map Location 3,177,744 - 3,178,863
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039124, LOC100039141, EG666464
Downstream geneLOC100039044, LOC631371, LOC666513, Tmem68, Tgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055G01.bB6Ng01-055G01.g
ACCDH877842DH877843
length1,1081,166
definitionDH877842|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G01, 5' end.DH877843|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaattaatagtggattcttgccttccgagactgctgtgtatt
tttgtttttattttttaattttcataccatgtattttgatcaggttttcc
ccttccccactgtctcccaacatggagtcctgatgagactggcatatact
tgagaggatgaggggtcctttagtggctaactctaggcatgagatctagg
ctaaatcacagcaactctgttcaaggttcaggaaacctcagaaaaagaca
ggctggaattgcagtaccaatttatagtgaagcctgaaagttggggatgg
gatcagaagtctgagaccatgctacatactcaagtctgttgtctatgggt
gatggagcagcagattcataccccagtgcaggtgaacagaacttagactt
ctgtgcaagcttctccactctttctgtatccactccatccaaagatgctg
cctgtgaagtaggcaccatcccactccttcctgagccatgttccagttgt
ttctggaaattccctcacaagtgtatttcaaactacttaaagtgacaaac
agatttaaccatcacaggggggtactgtcccagaagtgtcttctaaggta
acagatttgactagctggggtttaagcagaggacaggatttctttctatt
tagaaaacaagagaatggggttaaaattagaaaaaaatagaggagaggtt
gtgtgcagattatatgtagttatgtctgtttgaacaactcagctttcatc
ctactctgaaccactgcactcagccagccttattatcagatacaaagagc
ctgtgataaaaatgtaacatatgtacacagtttagtcacactatcacagc
acagtggatttagaagaagcttatcatgccaaacagcagtttctcatgga
ggcaacacatatgtagggacttgttttatgtcacatgcactcatggatca
cactgctgtgctccctttgaaaaagccaaaaactctatagctttaatctt
tggactctggcagggcataatttgttttccacatgtacagaggcttaaca
ggaagtatttcagaagttctgagacccaactaataatatgaatatctgat
gatttaaa
gaattcagtctttgagggattctgtcaatgaagacctagaggcaatagag
aagtccattgaaactttagaaaaatctttgacctccctgtctgaggtagt
tttgcagaacaggagaggtcttgatttgttgttcctaaaggaaggaagac
tgtgtgctgcccttaaagaagagtgctgcttctatgcagatcatacagga
atagttagagactctatgcagaaactgagagaaagattagagcgaaggaa
atgggaacaggatgctcaatgggggtggtttgagtcgtggtttgaatcac
gaccatcttagataacttctttgatttccgctgtcgccggaccaatcctt
atgatatgcttagctttagttttcggcccttgtataataaatagaggaat
ggctttcatccagagtagaattgatacagtaaaactcatggtttttcaaa
ggcaatatcaacctataattcaggtagatgaagagttaggggacaccaat
ctctaaaattctatgattagaattagtctaaacagaagaagaggggaata
aaaggaaataaaacttgagacctgtgattcatgtaatgtatgtcaaatag
cccaaagagttgtttgtgagctttgaaacttagggctgagaacatagcag
aacagaccaggacatgcccaggcaggcccatcaccttcctatctcccacc
cctctgacccaagttaaatgttaacaggctgctgatgtttaaatggacga
atcatgtgaaaccgcaccaattcctccccagccccactccttttctataa
aaacccctagcttccaagcctcgtggttgaatccactgtctcctgtgtga
gatacattttgacccggagcatggctttgtttccaaagattgtgctgtgc
tttaacagaaatacagacctgggtaataggtaggtagagtcacactgaga
tatgctgtcaagactgaatgagagcacgcaactgtatgaatggccctaca
caccgctttagacggcagaccaaatgggagtgtgtttagtaccaatccgt
tgtaatggggcatcctgaagcacctagtaagctaacaggacggctgagtt
atgtagctgcatgaagcttagaaatactctatgtaatcctttacggtcta
tgagttggagagactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_3177744_3178863
seq2: B6Ng01-055G01.b_47_1154

seq1  GAATTCCTAAATTAATAGTGGATTCTTGCCTTCCGAGACTGCTGTGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATTAATAGTGGATTCTTGCCTTCCGAGACTGCTGTGTATT  50

seq1  TTTGTTTTTATTTTTTAATTTTCATACCATGTATTTTGATCAGGTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTATTTTTTAATTTTCATACCATGTATTTTGATCAGGTTTTCC  100

seq1  CCTTCCCCACTGTCTCCCAACATGGAGTCCTGATGAGACTGGCATATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCACTGTCTCCCAACATGGAGTCCTGATGAGACTGGCATATACT  150

seq1  TGAGAGGATGAGGGGTCCTTTAGTGGCTAACTCTAGGCATGAGATCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGATGAGGGGTCCTTTAGTGGCTAACTCTAGGCATGAGATCTAGG  200

seq1  CTAAATCACAGCAACTCTGTTCAAGGTTCAGGAAACCTCAGAAAAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCACAGCAACTCTGTTCAAGGTTCAGGAAACCTCAGAAAAAGACA  250

seq1  GGCTGGAATTGCAGTACCAATTTATAGTGAAGCCTGAAAGTTGGGGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAATTGCAGTACCAATTTATAGTGAAGCCTGAAAGTTGGGGATGG  300

seq1  GATCAGAAGTCTGAGACCATGCTACATACTCAAGTCTGTTGTCTATGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAAGTCTGAGACCATGCTACATACTCAAGTCTGTTGTCTATGGGT  350

seq1  GATGGAGCAGCAGATTCATACCCCAGTGCAGGTGAACAGAACTTAGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGCAGCAGATTCATACCCCAGTGCAGGTGAACAGAACTTAGACTT  400

seq1  CTGTGCAAGCTTCTCCACTCTTTCTGTATCCACTCCATCCAAAGATGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAAGCTTCTCCACTCTTTCTGTATCCACTCCATCCAAAGATGCTG  450

seq1  CCTGTGAAGTAGGCACCATCCCACTCCTTCCTGAGCCATGTTCCAGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAGTAGGCACCATCCCACTCCTTCCTGAGCCATGTTCCAGTTGT  500

seq1  TTCTGGAAATTCCCTCACAAGTGTATTTCAAACTACTTAAAGTGACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAATTCCCTCACAAGTGTATTTCAAACTACTTAAAGTGACAAAC  550

seq1  AGATTTAACCATCACAGGGGGGTACTGTCCCAGAAGTGTCTTCTAAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAACCATCACAGGGGGGTACTGTCCCAGAAGTGTCTTCTAAGGTA  600

seq1  ACAGATTTGACTAGCTGGGGTTTAAGCAGAGGACAGGATTTCTTTCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTGACTAGCTGGGGTTTAAGCAGAGGACAGGATTTCTTTCTATT  650

seq1  TAGAAAACAAGAGAATGGGGTTAAAATTAGAAAAAAATAGAGGAGAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACAAGAGAATGGGGTTAAAATTAGAAAAAAATAGAGGAGAGGTT  700

seq1  GTGTGCAGATTATATGTAGTTATGTCTGTTTGAACAACTCAGCTTTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGATTATATGTAGTTATGTCTGTTTGAACAACTCAGCTTTCATC  750

seq1  CTACTCTGAACCACTGCACTCAGCCAGCCTTATTATCAGATACAAAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTGAACCACTGCACTCAGCCAGCCTTATTATCAGATACAAAGAGC  800

seq1  CTGTGATAAAAATGTAACATATGTACACAGTTTAGTCACACTATCACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATAAAAATGTAACATATGTACACAGTTTAGTCACACTATCACAGC  850

seq1  ACAGTGGATTTAGAAGAAGCTTATCATGCCAAACAGCAG-TTCTCATGGA  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACAGTGGATTTAGAAGAAGCTTATCATGCCAAACAGCAGTTTCTCATGGA  900

seq1  GGCAACACATATGTAGGGACTTGTTTTATGTCACATGCACTCATGGATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGCAACACATATGTAGGGACTTGTTTTATGTCACATGCACTCATGGA-TC  949

seq1  ACACTGCTGTGCTCCCTTGGAAAAAAGCCAAAAAACTCTATAGCTTTATT  999
      |||||||||||||||||| | |||||||| |||||||||||||||||| |
seq2  ACACTGCTGTGCTCCCTTTG-AAAAAGCC-AAAAACTCTATAGCTTTAAT  997

seq1  CTTTGGACTCTGGCAGGGGCATAATTTGGTTTCCACATGTACAGAGGCTT  1049
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  CTTTGGACTCTGGCA-GGGCATAATTTGTTTTCCACATGTACAGAGGCTT  1046

seq1  AACAAGTAGTTATTTCAGAAGTTCTGAAGAACCACAACTAATAAATTAAT  1099
      |||| | || |||||||||||||||| |||  | ||||||||||    ||
seq2  AACAGGAAG-TATTTCAGAAGTTCTG-AGA--CCCAACTAATAA---TAT  1089

seq1  GAATTATCTGATGATTATAAA  1120
      ||| |||||||||||| ||||
seq2  GAA-TATCTGATGATT-TAAA  1108