BAC Information

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BAC

Clone NameB6Ng01-055L10
Chromosome4 (Build37)Y (Build37)
Map Location 36,029,485 - 36,030,2631,120,761 - 1,120,960
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMobkl2b, Ifnk, 3110043O21Rik, LOC620559, LOC621227, Lingo2
Downstream geneLOC100042132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055L10.bB6Ng01-055L10.g
ACCDH878081DH878082
length781499
definitionDH878081|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L10, 5' end.DH878082|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(36,029,485 - 36,030,263)(1,120,761 - 1,120,960)
sequence
gaattcacattttaaatctgtgggtatactattactcaggattatttata
gttctcatattttttcctgtaactatattctctttgataaaagaacataa
gaagcaagccaaacggatctgaaggagtcttaaaatagccataaataact
caaaagcagagcatcaaagcaaatatgctttcagagaacaatggtgagat
aatggtcacaagacagagaccagtgacaattaatcacctctgcctgcctt
ggaaagcagaggctggcagtgccacacatcagatgataagggatagaagc
aaaaatcaaatggatagatggtccggggactaacgaaacaatgcattaat
tgtaaaaactttagtatctatctttaaagtacaaataggtggtgagtata
tggataagttgataaagcaagcctaaaaacttatttatacaatgcttttt
ttttttctccaccttcttttgttctctagattcccttgaaagctgctggc
attttttgcaaacaatagaataagtttcttaaactggcaacaatatttgt
ctactattaagaagtcagattattaagaccgggaattagagaaggctgac
catgaaggaaaggaattttgagtttaatgccctttgctttcacagatcct
accaaggtctcattcattgctttgcattaagaattacttaattcttcttc
ttcttcttcttcttcttcttcttcttcttctttttcttcttcttcttctt
cttcttcttcttcttcatctcttcttcttct
gaattcatattagctcttctttgaaagtctggtagaattctatgctaaaa
tcatctggccctaagcttttgttttgttgggagattttagtcactagatc
tatttccttggagtttataggactattaaaattgttcagatgatctcagt
ttaactttggtacgtgaaatctataaagaaatcatccatttcatttagat
tttcccaattttgtcaatacaggcttttgaagaaagacctaaagttttct
aaagtttttttttttttttttttttttttttttttttttaaaacttcctc
agtgatggccgactaggccatcttttgatacatatgcagctagagtcaaa
agctccccggtactggttagttcataatgttgttccacctatagggttgc
agatccctttagctccttggctactttctctagctcctccattgggagcc
ctgtgatccatccattagctgactgtgagcatccacttctgtgtttgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_36029485_36030263
seq2: B6Ng01-055L10.b_51_831

seq1  GAATTCACATTTTAAATCTGTGGGTATACTATTACTCAGGATTATTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTTAAATCTGTGGGTATACTATTACTCAGGATTATTTATA  50

seq1  GTTCTCATATTTTTTCCTGTAACTATATTCTCTTTGATAAAAGAACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATATTTTTTCCTGTAACTATATTCTCTTTGATAAAAGAACATAA  100

seq1  GAAGCAAGCCAAACGGATCTGAAGGAGTCTTAAAATAGCCATAAATAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAGCCAAACGGATCTGAAGGAGTCTTAAAATAGCCATAAATAACT  150

seq1  CAAAAGCAGAGCATCAAAGCAAATATGCTTTCAGAGAACAATGGTGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCAGAGCATCAAAGCAAATATGCTTTCAGAGAACAATGGTGAGAT  200

seq1  AATGGTCACAAGACAGAGACCAGTGACAATTAATCACCTCTGCCTGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCACAAGACAGAGACCAGTGACAATTAATCACCTCTGCCTGCCTT  250

seq1  GGAAAGCAGAGGCTGGCAGTGCCACACATCAGATGATAAGGGATAGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAGAGGCTGGCAGTGCCACACATCAGATGATAAGGGATAGAAGC  300

seq1  AAAAATCAAATGGATAGATGGTCCGGGGACTAACGAAACAATGCATTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAATGGATAGATGGTCCGGGGACTAACGAAACAATGCATTAAT  350

seq1  TGTAAAAACTTTAGTATCTATCTTTAAAGTACAAATAGGTGGTGAGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAACTTTAGTATCTATCTTTAAAGTACAAATAGGTGGTGAGTATA  400

seq1  TGGATAAGTTGATAAAGCAAGCCTAAAAACTTATTTATACAATGCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAGTTGATAAAGCAAGCCTAAAAACTTATTTATACAATGCTTTTT  450

seq1  TTTTTTCTCCACCTTCTTTTGTTCTCTAGATTCCCTTGAAAGCTGCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCCACCTTCTTTTGTTCTCTAGATTCCCTTGAAAGCTGCTGGC  500

seq1  ATTTTTTGCAAACAATAGAATAAGTTTCTTAAACTGGCAACAATATTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGCAAACAATAGAATAAGTTTCTTAAACTGGCAACAATATTTGT  550

seq1  CTACTATTAAGAAGTCAGATTATTAAGACCGGGAATTAGAGAAGGCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATTAAGAAGTCAGATTATTAAGACCGGGAATTAGAGAAGGCTGAC  600

seq1  CATGAAGGAAAGGAATTTTGAGTTTAATGCCCTTTGCTTTCACAGATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGAAAGGAATTTTGAGTTTAATGCCCTTTGCTTTCACAGATCCT  650

seq1  ACCAAGGTCTCATTCATTGCTTTGCATTAAGAATTACTTAATTCTTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGTCTCATTCATTGCTTTGCATTAAGAATTACTTAATTCTTCTTC  700

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTT  750

seq1  CTTCTTCTTCTTCTTC--TTCTTCTTCTTCT  779
      ||||||||||||||||   ||||||||||||
seq2  CTTCTTCTTCTTCTTCATCTCTTCTTCTTCT  781

seq1: chrY_1120761_1120960
seq2: B6Ng01-055L10.g_369_568

seq1  CAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAA  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAA  50

seq1  GAGCTCCGGGGTACTGGTTAGCTCATAACGTTGTTCCACCTATAGGGTTG  100
       ||||||  |||||||||||| |||||| |||||||||||||||||||||
seq2  AAGCTCCCCGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTG  100

seq1  GAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGC  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGC  150

seq1  CCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCT  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCT  200