BAC Information

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BAC

Clone NameB6Ng01-055P21
Chromosome4 (Build37)
Map Location 128,290,213 - 128,291,307
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik, Zscan20
Downstream geneTlr12, Phc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080, Sync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055P21.b
ACCDH878290
length1,090
definitionDH878290|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P21, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataatctatattcgatgataataatccttactgttcttgacaag
gacctgagtttgcactagcaactcactttggggcgggtgctcattaccac
ctctaactccagctccagggaacctgacgtcctcttctggtctcagagta
tactggcactcatgtgaacatgccagacttaacacatgcacgtaattaaa
aaaataagaatcctaaaaaaattaaaacgatgttttatattactacattt
gtatcatttataagcaaatactcatatgttggaaacatgtgccctggaag
tgtgttttacggctaggagtacttgatcctgtgagtttggaaactgggtc
ctgaagcaaagacgaaaactgatgtctttatcctcagagcctattcctgt
cagcggaaaagattcacattggcaaatgcagcatgccgccaaaacaggca
gaacccgaggtttattctggctgggatttggtctcttagggattatttta
ttttatttttttaaatttccacttctaaaaggctaggttttaattagaca
aaggcaaagagacatcttacaatcccaggctggatttagggtgaggtgcg
ccctcttgtgacctaatagcatatttctctgtctgcgcactagctccgtt
tgtttcagctccttaggatagaatggctgatgtggaggtctcacaggtcc
ctgcaaaagtgtctttccactttcagacgcaaacactctatccaacacac
tcatcccactcatccctccttacggtgtcaatgtttacccaagtccttag
cttcttcttcatgaaatgtcaggcagcaagcaatgtaacttcaggggttt
taggatttaaattccagccttggtacttactgtgcatatgattttgagca
cgctaatttatttatatctctagcttcatccttttcataaatggggtaac
agtaccaatcctcaaggagcttcgtgaacaatgaacaaggtgtactaatg
tatcctgtaatacaaccgctacttacgcctagtaaatcactgaataatta
agcactgaatccgaagccgggttgtcagggtgtgcagagg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128290213_128291307
seq2: B6Ng01-055P21.b_45_1134 (reverse)

seq1  CCTCTGCAC-CACTG-CCACCCGGCTTCTGATTCATTGCTTAATATATCA  48
      ||||||||| | ||| | |||||||||| |||||| ||||||||   |||
seq2  CCTCTGCACACCCTGACAACCCGGCTTCGGATTCAGTGCTTAATTATTCA  50

seq1  GTGATTTACTTAGCGTATGTAGTGTGCTGGTATTAACAGGTTACATTAGT  98
      ||||||||||  ||||| |||  | | | ||||| ||||| |||||||||
seq2  GTGATTTACTAGGCGTAAGTA--GCGGTTGTATT-ACAGGATACATTAGT  97

seq1  ACACCTTGTTCAATTGTTCCCGAAGCTCTGTGAGG-TTGGTACTGTTACC  147
      ||||||||||| ||||||| ||||||||  ||||| ||||||||||||||
seq2  ACACCTTGTTC-ATTGTTCACGAAGCTCCTTGAGGATTGGTACTGTTACC  146

seq1  CCATTTTATGAAAAGGATGGAAGCTTAGAGATATAAATAAATTAGCCTGC  197
      ||| |||||||||||||| ||||| ||||||||||||||||||||| |||
seq2  CCA-TTTATGAAAAGGAT-GAAGC-TAGAGATATAAATAAATTAGCGTGC  193

seq1  TCAAAATCATATGCACAGTAAGTACCAAGGCTGGAATTTGAAATCCTAAA  247
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCAAAATCATATGCACAGTAAGTACCAAGGCTGGAATTT-AAATCCTAAA  242

seq1  ACCCCAGAAGTTACATTGCTTGCTGCCTGACATTTCATGAAGAAGAAGCT  297
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGAAGTTACATTGCTTGCTGCCTGACATTTCATGAAGAAGAAGCT  292

seq1  AAGGACTTGGGTAAACATTGACACCGTAAGGAGGGCTGAGTGGGCTGAGT  347
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  AAGGACTTGGGTAAACATTGACACCGTAAGGAGGGATGAGTGGGATGAGT  342

seq1  GTGTTGGATAGAGTGTTTGCGTCTGAAAGTGGAAAGACACTTTTGCAGGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGATAGAGTGTTTGCGTCTGAAAGTGGAAAGACACTTTTGCAGGG  392

seq1  ACCTGTGAGACCTCCACATCAGCCATTCTATCCTAAGGAGCTGAAACAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAGACCTCCACATCAGCCATTCTATCCTAAGGAGCTGAAACAAA  442

seq1  CGGAGCTAGTGCGCAGAAAGAGAAATATGCTATTAGGTCACAAGAGGGCG  497
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CGGAGCTAGTGCGCAGACAGAGAAATATGCTATTAGGTCACAAGAGGGCG  492

seq1  CACCTCACCCTAAATCCAGCCTGGGATTGTAAGATGTCTCTTTGCCTTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCACCCTAAATCCAGCCTGGGATTGTAAGATGTCTCTTTGCCTTTG  542

seq1  TCTAATTAAAACCTAGCCTTTTAGAAGTGGAAATTTAAAAAAATAAAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTAAAACCTAGCCTTTTAGAAGTGGAAATTTAAAAAAATAAAATA  592

seq1  AAATAATCCCTAAGAGACCAAATCCCAGCCAGAATAAACCTCGGGTTCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCCTAAGAGACCAAATCCCAGCCAGAATAAACCTCGGGTTCTG  642

seq1  CCTGTTTTGGCGGCATGCTGCATTTGCCAATGTGAATCTTTTCCGCTGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTGGCGGCATGCTGCATTTGCCAATGTGAATCTTTTCCGCTGAC  692

seq1  AGGACTAGGCTCTGAGGATAAAGACATCAGTCTTCGTCTTTGCTTCAGGA  747
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGAATAGGCTCTGAGGATAAAGACATCAGTTTTCGTCTTTGCTTCAGGA  742

seq1  CCCAGTCTCCAAACTCACAGGATCAAGTACTCCTAGCCGTAAAACACACT  797
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTCCAAACTCACAGGATCAAGTACTCCTAGCCGTAAAACACACT  792

seq1  TCCAGGGCACATGTTTCCAACATATGAGTATTTGCTTATAAATGATACAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGCACATGTTTCCAACATATGAGTATTTGCTTATAAATGATACAA  842

seq1  ATGTAGTAATATAAAACATCGTTTTAATTTTTTTAGGATTCTTATTTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTAATATAAAACATCGTTTTAATTTTTTTAGGATTCTTATTTTTT  892

seq1  TAATTACGTGCATGTGTTAAGTCTGGCATGTTCACATGAGTGCCAGTATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACGTGCATGTGTTAAGTCTGGCATGTTCACATGAGTGCCAGTATA  942

seq1  CTCTGAGACCAGAAGAGGACGTCAGGTTCCCTGGAGCTGGAGTTAGAGGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGACCAGAAGAGGACGTCAGGTTCCCTGGAGCTGGAGTTAGAGGT  992

seq1  GGTAATGAGCACCTGCCCCAAAGTGAGTTGCTAGTGCAAACTCAGGTCCT  1047
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGTAATGAGCACCCGCCCCAAAGTGAGTTGCTAGTGCAAACTCAGGTCCT  1042

seq1  TGTCAAGAACAGTATGGATTATTATCATCGAATATAGATTATGAATTC  1095
      |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTCAAGAACAGTAAGGATTATTATCATCGAATATAGATTATGAATTC  1090