MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-056H23
Chromosome	4 (Build37)
Map Location	20,468,376 - 20,469,518
singlet/doublet	singlet
Overlap gene	E130310K16Rik
Upstream gene	Cpne3, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cpne3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70568 MGI:1917818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410005O16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66302 MGI:1913552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wwp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107568 MGI:1861728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc7a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74087 MGI:1921337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242341 MGI:1924415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667282 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Ttpa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50500 MGI:1354168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667301 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664800 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664800 MGI:3645981
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	E130310K16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269513 MGI:2444830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpne3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62530190 GeneID:70568 MGI:1917818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine III transcript_id : NM_027769.2

name	2410005O16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803234 GeneID:66302 MGI:1913552
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410005O16 gene transcript_id : NM_025476.4

name	Wwp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112734835 GeneID:107568 MGI:1861728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain containing E3 ubiquitin protein ligase 1 transcript_id : NM_177327.3

name	Slc7a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980773 GeneID:74087 MGI:1921337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7, (cationic amino acid transporter, y+ system) member 13 transcript_id : NM_028746.2

name	Atp6v0d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366331 GeneID:242341 MGI:1924415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit D2 transcript_id : NM_175406.2

name	Ttpa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354109 GeneID:50500 MGI:1354168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tocopherol (alpha) transfer protein transcript_id : NM_015767.2

name	LOC667301 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252055 GeneID:667301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-glutamyl hydrolase transcript_id : XM_989632.2

name	E130310K16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50054089 GeneID:269513 MGI:2444830
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130310K16 gene transcript_id : NM_172987.2

name	Cpne3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25141335 CCDS:CCDS17991.1 GeneID:70568 MGI:1917818
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0005544 - calcium-dependent phospholipid binding [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence ISS] GO_process : GO:0006629 - lipid metabolism [Evidence ISS]; GO:0016192 - vesicle-mediated transport [Evidence ISS] codon_start : 1 product : copine III protein_id : NP_082045.1

name	2410005O16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560255 CCDS:CCDS17992.1 GeneID:66302 MGI:1913552
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66302 protein_id : NP_079752.3

name	Wwp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112734836 GeneID:107568 MGI:1861728
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0000151 - ubiquitin ligase complex [Evidence ISS] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence TAS] [Evidence ISS] GO_process : GO:0007417 - central nervous system development [Evidence ISS]; GO:0046718 - entry of virus into host cell [Evidence ISS]; GO:0030324 - lung development [Evidence TAS]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006464 - protein modification [Evidence IEA]; GO:0016567 - protein ubiquitination [Evidence TAS] [Evidence ISS]; GO:0007165 - signal transduction [Evidence ISS]; GO:0030217 - T cell differentiation [Evidence TAS]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : WW domain-containing protein 1 protein_id : NP_796301.2

name	Slc7a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270204 CCDS:CCDS17993.1 GeneID:74087 MGI:1921337
definition	codon_start : 1 product : aspartate/glutamate transporter 1 protein_id : NP_083022.1

name	Atp6v0d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150255 CCDS:CCDS17994.1 GeneID:242341 MGI:1924415
definition	GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : vacuolar proton-translocating ATPase d subunit d2; ATPase, H+ transporting, V0 subunit D, isoform 2 product : ATPase, H+ transporting, V0 subunit D isoform 2 protein_id : NP_780615.1

name	Ttpa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468963 CCDS:CCDS17995.1 GeneID:50500 MGI:1354168
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0008431 - vitamin E binding [Evidence TAS] GO_process : GO:0007566 - embryo implantation [Evidence IMP]; GO:0042360 - vitamin E metabolism [Evidence IMP] codon_start : 1 note : alpha TTP product : tocopherol (alpha) transfer protein protein_id : NP_056582.1

name	LOC667301 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94371480 GeneID:667301
definition	codon_start : 1 product : gamma-glutamyl hydrolase protein_id : XP_994726.1

name	E130310K16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50054090 CCDS:CCDS17997.1 GeneID:269513 MGI:2444830
definition	codon_start : 1 product : hypothetical protein LOC269513 protein_id : NP_766575.2

name	LOC667282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667282
definition	number : 1 pseudo : _no_value

name	EG664800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664800
definition	number : 1 pseudo : _no_value

clone name	MSMg01-171M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-294I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-537E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-376J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-056H23.b	B6Ng01-056H23.g
ACC	DH878636	DH878637
length	1,138	1,223
definition	DH878636\|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H23, 5' end.	DH878637\|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H23, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacacagaagtgagaaccccattgctactgatgctctaattcctt gccttctgacagttttcagagacctggtacctttgtggtattcagacctc ctagagagactctcaactgtggcccgttaggagtctcataatattctgta tcatacacccagtagtgtaaaactttccattccttcttttgcaccagtca ttaaattaccaagttctgacattttgatttctattagacagcaatgaaaa gtggctaattaattactctgagataatattgcctggcacttctactttca ctgaattgcaataatatttttcctgttagctaactcattacagaacttga ggacacaaagtcattattgagaaccttgtccactgtgtcatgataataca aggactaatattccccagcactttctcacctagtctagaatttaaatgag gaagtgattcatgtctgaataatatgagaacaaatctcagggtccatgct aagctcttgcctttatagcctccttgtgttctgcacattttgagtagaca tttgtagctgactgtttgcacacactaggtttaggaaaccaatggccaat gtcaaatattaaagaaacaacttctacttccataatccatatatttcaaa gggaaagtgtagtatttaagaagccaggtttctccatactaattaacaga agaatttagacaaaaggctaactaaatcttattcaggcaaaatttttgac agcatcagcagagaggtttttctaatatctagagtcattgtttttttcac actgacaccccccaaagaacttctgattaatgagtcttctaaggaaaatt gtacatgaacttctggcagactgcaggttgcaatattgttatgagatgcc ttctttgtctatgattcaaaggaattgccaacaaccaaagcattctaagg aaattatttgtaatctagttcatggcacatctatgaactaagattaatgt ggacatgtcctttgttctggtagtcttctgtaatcatttaagtgggaggg gtctggaccctcaagaatacctatgggaatttttgcctattgaccacact caggacacagcaagtactttctatcattccaggctttc	gaattcctttgtatacttgtttgtttgtttgtttgtttgttgttgctgca catgtaagttgtccttttcctttttaaatgtctgggaaaactccatcccc tgtaaaccaaaaaagtgttaagacatcaaaggtaaagctcccttctgttc cctgaatacaagtggtgccctctgtatttgcatgtatcatagctatcact gtatcattttcatctataggcactccgaacttctgtatcttcaaatggct ttcttgatgtgaagaacttgacatagacaatgttactaaaatatggttaa aagctttcacctgaaactggtacaaattgaggcctatgccacagaaggag cccataaggagcctaggatagaaccaaacatgactggcaaaaaaaaaaaa aaaaaaaaaaaaaaaagtcagtgaaatcattcctactgatatttacctgt actctatactcagagattagtgcccagttcaattttcatcagagacacct catccagcaactgtaggggagcagatgaagagctccacagctaaacctta gtcagaatttggaaaacctgtggaagagtgggcagtaggagccagagtgc tagaggacaccatgaaaatactgctcacagaatcgacttaacaagactca tagaagcccacagactaaagtggatctgagtaaggtcctctgcatatatg ttatggttgtttagctttgtgttcttgtgggactcctaacagtaggagtg ggggtgtctttgattcttttgcctaatcctgaacagaacaccaatggctt ataatctaagaccaacattcaacaaatgtgaccccataaaaattgaaaag gttctataaggctttacaggaaaactctctattgctggttggattgcaag ctgatacaaccactctggaaatcagtctgctggtttctcagaaagtggat atagtataccactctgggcatatatcctccaaaaaatacagaacacatgc tccactatgtcatagtagctttatttatcatagcagaagctgaagaataa gacgcacttcactagagaatgaaacagaaatgtggacataccatgaacat ctactcagctaaaaaaatgagccttcagattctaggcaaatgatgaactg atatatccctaggggatactgtcctagcaaccaagtctctcccatgatat ggaatagccaaagcctcgtgtac
quality values	Open. Hide. 33 47 24 35 61 38 18 55 35 47 38 61 25 28 11 11 8 10 12 14 55 55 61 59 61 43 27 28 45 28 19 18 26 27 32 55 44 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 59 61 59 61 61 59 55 55 59 59 59 61 61 61 61 61 59 55 55 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 57 53 57 57 57 57 57 57 57 57 57 57 57 57 52 57 57 57 57 53 47 47 57 57 57 57 43 57 57 52 57 57 57 53 45 57 53 57 50 57 57 57 43 51 53 57 53 53 53 53 53 57 53 47 46 33 57 57 57 53 53 52 52 57 53 57 53 53 53 57 57 53 47 41 47 47 46 57 52 57 57 53 53 38 52 53 53 57 53 53 53 47 53 53 45 47 34 53 45 53 53 52 37 50 53 53 53 53 37 57 57 52 46 35 46 53 57 57 50 57 53 50 41 52 32 53 50 50 50 50 57 53 41 52 37 52 52 43 47 50 33 53 57 52 57 52 50 50 39 41 27 52 37 53 52 50 47 53 52 52 52 52 26 31 53 53 30 52 37 27 57 37 40 38 47 33 35 57 43 50 36 57 30 52 31 39 40 52 33 57 35 37 37 37 53 39 40 53 39 28 35 57 31 23 57 57 23 19 57 57 57 57 33 37 30 29 40 37 27 41 37 36 37 48 37 36 53 24 47 24 40 20 57 57 57 37 48 40 28 40 44 32 32 41 40 40 40 48 36 37 36 27 32 44 41 23 51 46 51 51 46 39 32 23 31 17 30 31 36 29 29 21 31 33 44 33 26 30 30 47 41 28 48 34 32 29 38 29 29 29 29 17 30 29 34 28 29 29 24 28 38 29 30 29 35 25 32 35 41 39 51 51 28 21 33 23 15 29 29 17 35 29 29 40 29 27 30 33 28 30 41 26 29 14 29 19 29 30 27 13 31 16 12 19 17 23 29 29 29 33 22 25 30 14 26 21 19 17 29 23 31 18 29 23 30 23 26 29 25 46 22 26 25 36 26 25 28 22 29 19 28 24 13 51 38 32 28 28 29 23 26 34 21 27 21 22 29 21 23 24 18 11 41 29 24 28 19 28 28 31 29 21 15 24 22 25 51 19 23 12 17 28 51 22 28 23 38 51 10 9 15 22 19 20 25 22 19 17 22 32 17 15 28 20 30 26 26 15 15 19 26 39 33 26 23 28 9 38 17 30 21 33 17 15 5 15 33 27 23 25 28 26 18 27 20 22 34 9 11 16 26 18 7 6 9 6 16 6 6 6 8 26 19 22 33 12 29 14 21 16 6 12 17 13 15 23 10 5 8 37 25 15 16 29 6 6 5 6 3 3 14 16 14 8 5 9 7 4 7 6 8 11 5 7 25 9 7 6 5 8 13 16 12 18 13 24 9 4 3 6 5 16 5 5 4 18 10 14 9 7 5 8 7 4 9 5 8 3 7 12 10 6 9 9 3 4 13 12 13 15 24 10 23 27 24 14 7 15 7 6 12 25 23 20 13 6 5 3 4 14 21 10 13	Open. Hide. 61 47 43 49 61 34 26 22 25 25 20 28 26 34 35 27 55 44 59 59 61 61 61 61 61 61 59 59 61 61 59 59 61 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 59 45 59 43 37 44 41 44 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 55 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 55 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 55 61 61 55 55 55 61 61 61 61 61 61 61 61 61 55 55 55 55 43 49 50 55 61 55 61 61 55 50 61 55 55 55 55 50 53 50 61 53 50 50 50 53 52 45 47 50 50 52 43 50 50 50 50 37 50 50 50 50 45 43 32 21 52 28 24 37 33 47 33 47 61 61 61 61 61 61 61 61 61 50 50 50 50 61 61 61 47 42 50 39 16 46 24 47 45 34 47 53 47 47 38 46 53 53 33 33 47 42 47 52 53 61 50 45 53 53 47 47 53 42 45 38 20 47 27 38 47 45 31 53 45 47 53 46 47 32 47 47 47 53 52 53 47 32 37 47 47 50 53 33 50 47 43 23 53 42 53 53 53 53 38 53 53 43 43 34 42 38 45 45 53 43 57 47 31 57 52 53 57 57 52 52 47 53 50 52 34 47 53 33 53 53 38 19 57 30 50 47 43 47 36 27 52 31 35 46 45 35 52 46 42 53 53 57 57 57 42 42 40 50 52 53 43 53 50 38 50 39 42 57 53 45 50 27 50 35 43 43 50 50 35 27 53 37 50 30 52 40 36 50 42 27 57 50 23 46 47 53 42 52 42 32 42 32 40 52 57 52 32 32 52 33 33 37 34 52 31 53 24 35 37 36 28 57 12 25 38 35 35 40 37 33 29 35 37 36 43 52 53 31 41 39 35 53 53 34 35 33 29 53 53 53 22 37 47 57 53 40 33 41 32 28 33 34 37 53 27 53 53 45 37 29 30 37 41 37 44 34 30 30 32 30 29 9 22 30 27 30 32 51 51 51 29 27 38 30 32 35 47 41 28 39 28 30 27 32 51 51 38 37 23 23 23 28 30 29 28 29 29 30 28 33 27 28 17 47 29 28 31 28 31 29 25 25 38 36 25 39 28 35 31 28 29 28 28 21 32 28 25 34 21 21 9 41 35 17 34 29 29 26 26 28 20 46 29 25 31 22 28 33 28 41 37 34 15 28 12 51 51 43 16 23 26 21 29 51 51 19 11 25 14 23 20 22 26 29 25 24 25 28 14 29 46 30 22 29 25 32 20 39 51 51 28 22 29 25 27 23 27 20 14 24 21 15 27 27 22 23 14 19 24 33 22 27 22 19 21 25 34 22 28 23 21 11 12 14 27 8 34 12 8 18 23 21 24 19 25 17 51 26 24 15 16 19 20 19 25 31 27 13 22 23 17 38 16 18 23 16 11 9 38 51 34 13 17 9 24 9 5 5 8 24 28 23 27 12 17 32 22 17 15 7 12 9 15 25 23 25 9 10 14 16 10 8 26 26 22 19 10 9 5 4 5 5 5 6 12 12 33 17 16 27 19 7 13 14 31 29 23 8 6 23 5 4 11 12 12 13 14 16 8 12 15 18 29 9 6 17 31 34 12 7 17 34 17 12 21 21 13 22 12 10 17 6 12 18 33 11 12 10 10 4 6 9 29 12 21 7 4 8 22 5 4 7 4 4 6 8 8 4 12 5 10 7 10 15 6 22 8 12 5 5 6 5 4 4 25 32 26 5 16 5 7 7 2 4 6 17 4 8 9 9 4 14 4 7 13 9 5 10 3 8 21 8 12 6 7 7 5 3 4 24 22 23 8 19 4 3 6 4 4 3 6 8 9 3 6 17 10 12 8 14 10 7 10 8 6 25 9 7 16 3 3 12 3 8 8 3 1 10 6 11 3 7 19 7 3 4 3 1 4 1 3 3 6 4 3 2 2 1 2 2 3 3 13 6 5 19 8 12 13 4 2 3 6 2 3 17 6 7 13 9 1 2 9 7 6 4 9 5 5 6 5 7 3 2 1 5 9 16 4 5 5 4 4 2 4 3 4 6 7 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_20468376_20469518
seq2: B6Ng01-056H23.b_49_1186

seq1  GAATTCACACAGAAGTGAGAACCCCATTGCTACTGATGCTCTAATTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAGAAGTGAGAACCCCATTGCTACTGATGCTCTAATTCCTT  50

seq1  GCCTTCTGACAGTTTTCAGAGACCTGGTACCTTTGTGGTATTCAGACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTGACAGTTTTCAGAGACCTGGTACCTTTGTGGTATTCAGACCTC  100

seq1  CTAGAGAGACTCTCAACTGTGGCCCGTTAGGAGTCTCATAATATTCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAGACTCTCAACTGTGGCCCGTTAGGAGTCTCATAATATTCTGTA  150

seq1  TCATACACCCAGTAGTGTAAAACTTTCCATTCCTTCTTTTGCACCAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACACCCAGTAGTGTAAAACTTTCCATTCCTTCTTTTGCACCAGTCA  200

seq1  TTAAATTACCAAGTTCTGACATTTTGATTTCTATTAGACAGCAATGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTACCAAGTTCTGACATTTTGATTTCTATTAGACAGCAATGAAAA  250

seq1  GTGGCTAATTAATTACTCTGAGATAATATTGCCTGGCACTTCTACTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAATTAATTACTCTGAGATAATATTGCCTGGCACTTCTACTTTCA  300

seq1  CTGAATTGCAATAATATTTTTCCTGTTAGCTAACTCATTACAGAACTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTGCAATAATATTTTTCCTGTTAGCTAACTCATTACAGAACTTGA  350

seq1  GGACACAAAGTCATTATTGAGAACCTTGTCCACTGTGTCATGATAATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAAAGTCATTATTGAGAACCTTGTCCACTGTGTCATGATAATACA  400

seq1  AGGACTAATATTCCCCAGCACTTTCTCACCTAGTCTAGAATTTAAATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAATATTCCCCAGCACTTTCTCACCTAGTCTAGAATTTAAATGAG  450

seq1  GAAGTGATTCATGTCTGAATAATATGAGAACAAATCTCAGGGTCCATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATTCATGTCTGAATAATATGAGAACAAATCTCAGGGTCCATGCT  500

seq1  AAGCTCTTGCCTTTATAGCCTCCTTGTGTTCTGCACATTTTGAGTAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTGCCTTTATAGCCTCCTTGTGTTCTGCACATTTTGAGTAGACA  550

seq1  TTTGTAGCTGACTGTTTGCACACACTAGGTTTAGGAAACCAATGGCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCTGACTGTTTGCACACACTAGGTTTAGGAAACCAATGGCCAAT  600

seq1  GTCAAATATTAAAGAAACAACTTCTACTTCCATAATCCATATATTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATATTAAAGAAACAACTTCTACTTCCATAATCCATATATTTCAAA  650

seq1  GGGAAAGTGTAGTATTTAAGAAGCCAGGTTTCTCCATACTAATTAACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGTGTAGTATTTAAGAAGCCAGGTTTCTCCATACTAATTAACAGA  700

seq1  AGAATTTAGACAAAAGGCTAACTAAATCTTATTCAGGCAAAATTTTTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAGACAAAAGGCTAACTAAATCTTATTCAGGCAAAATTTTTGAC  750

seq1  AGCATCAGCAGAGAGGTTTTTCTAATATCTAGAGTCATTGTTTTTTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGCAGAGAGGTTTTTCTAATATCTAGAGTCATTGTTTTTTTCAC  800

seq1  ACTGACACCCCCCAAAGAACTTCTGATTAATGAGTCTTCTAAGGAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACACCCCCCAAAGAACTTCTGATTAATGAGTCTTCTAAGGAAAATT  850

seq1  GTACATGAACTTCTGGCAGACTGCAGGTTGCAATATTGTTATGAGATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGAACTTCTGGCAGACTGCAGGTTGCAATATTGTTATGAGATGCC  900

seq1  TTCTTTGTCTATGATTCAAAGGAATTGCCAACAACCAAAGCATTCTAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTCTATGATTCAAAGGAATTGCCAACAACCAAAGCATTCTAAGG  950

seq1  AAATTATTTGTAAATCTAGTTCATGGCACATCTATGAACTAAGATTAATG  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTGT-AATCTAGTTCATGGCACATCTATGAACTAAGATTAATG  999

seq1  TGGACATGTCCTTTGTTCTGGTAGTCTTCTGTAAATCATTTAAGTGGGAG  1050
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGACATGTCCTTTGTTCTGGTAGTCTTCTGT-AATCATTTAAGTGGGAG  1048

seq1  GTGTCTGGACCTCTCAGAGATACCTATGGGATTTTCTGCCTATTGACCAC  1100
      | ||||||||| ||||   |||||||||||| ||| ||||||||||||||
seq2  GGGTCTGGACC-CTCAAGAATACCTATGGGAATTTTTGCCTATTGACCAC  1097

seq1  ACTCAAGGACACAGCAAGTACTTTCTATCATTCCAGTGCTTTC  1143
      |||| ||||||||||||||||||||||||||||||| ||||||
seq2  ACTC-AGGACACAGCAAGTACTTTCTATCATTCCAG-GCTTTC  1138

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information