BAC Information

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BAC

Clone NameB6Ng01-057B02
Chromosome4 (Build37)
Map Location 50,413,168 - 50,414,255
singlet/doubletsinglet
Overlap genenone
Upstream geneC730036D15Rik, LOC100040919, LOC666617, Rbpsuh-ps2, LOC230161, Baat, Mrpl50, Zfp189, Aldob, 2810432L12Rik, LOC100040742, Rnf20, Ppp3r2, LOC666663
Downstream geneLOC100040979, LOC666681, LOC100040814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057B02.bB6Ng01-057B02.g
ACCDH879045DH879046
length1,0781,052
definitionDH879045|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B02, 5' end.DH879046|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattccttagtgctcatcattgtttgttgtattttggttatagct
tcttctcttatagtacctaatacagctcataccgtgagttagtgtccctt
cttgagaaataacttgtgttatctttgtctcctgaacagatgagtatggg
attgttctctatttttacgtcataatgttaaaatagtaaatgtttgttta
aaataagattctaagatagaatatttttctgtatgtttatgatgtatgta
agagttttctcaaaaagttcaggaccaatttttatgatttccttaaggtt
tcagatttatgatactcctaagaaaactcaaccatttcacaataattaca
gatgcatttgacactatcttagtttcaatgttttttcttactattttctg
ttttctactggtacatatatacattactgaacaagttgtaacaaaagaaa
atttaaattttcattaatatactaatcactaattcataaaatgtaaaaag
tagatccagatatctgattaaaatcctacgagctttaatgggtgtcacta
tatgtcacctgaataaattctgcattattttattgctctgattataatta
catattcatagttaatgaactatggtaatttcatttagaaaaataggaaa
atttcataagactgacagaacatatagaactaagaataataaaactggaa
ttcctaataaagagttcttgaaactataactagataatcattaaaatcac
atgttcattttaatgatattacatttaaaaaataacattttttataatgc
agaataaacttaacaatatcacagtggaaaatatgtaattcagttacttg
ataagaaaatatgtaaattaaatttatttcttgcatcgcaatacaaaatt
atccatcacaccacaaacaaatacccagatataattgtcagaaatgatcc
tagaatggatctgcaaaatataattcagagtccttgtaaggaagtccaag
aaaacagtatcttaatcttgtgacctccattttcaaaaccagagacttgt
tttttggattttttttgtcctctgccag
gaattctctgtttagctctgtactcaaggatgattgagggaagtagagga
agggggatatagaggagagagagaagtgagatggaaaaatggggcacgat
cagatactagaggggacaggagagaggtacagggggatcaggaaatcaaa
taaaaatatgtaacagtgggggatgaggaaataggggtagccactgtaag
attccagacaccagggattctagaagctcccaggacccaacaggggtgac
tttaatcaacataggcaacgaaggagagaaaacctttagagacgacctcc
agtagatacgcatggcccccagtcaagggatgggaacacctacacacctc
aaagtttttaacccagaaatattcttgtccaaaggaaagacaggaacaaa
aaaaatggcatagagactgatggaagtgccatccagggaacaccacacct
ggagatccatcttgtctgctgccattgttgctcttgccaagagatacttg
ctgacaggatcttggtatgactgttccctggatttccatttattgaacaa
ttcctccatccctgggatgaagcctacttgatcatgatggataattgttt
tgatgtgttttggattcagtttgtggcaattttattgagtatttttgcat
ggatatacataggagaaattgatctgaagttctctttcttttgtcggggt
ctttggaggtattaggtatcaaagtaatagtggcttcatagaacaaattt
aggtattgttccttctgtttctattttgtggggataatttgaagagcatt
ggtattaggtcttctttgacagtcttgtagaactttgcactaaaacccat
tctggtttctgggtttgggagacttttatgactgcttctattctttacca
ttatgggaactgttagatcattatctgatcctgattaacttggtaccttg
aattgccagaaattgccattgcatttagattttctgtttgtgtgcatata
agcgtttttgagaggatcagatggacttcaaattaccccacatttcatgg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_50413168_50414255
seq2: B6Ng01-057B02.b_48_1125

seq1  GAATTCATTCCTTAGTGCTCATCATTGTTTGTTGTATTTTGGTTATAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCTTAGTGCTCATCATTGTTTGTTGTATTTTGGTTATAGCT  50

seq1  TCTTCTCTTATAGTACCTAATACAGCTCATACCGTGAGTTAGTGTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTATAGTACCTAATACAGCTCATACCGTGAGTTAGTGTCCCTT  100

seq1  CTTGAGAAATAACTTGTGTTATCTTTGTCTCCTGAACAGATGAGTATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAAATAACTTGTGTTATCTTTGTCTCCTGAACAGATGAGTATGGG  150

seq1  ATTGTTCTCTATTTTTACGTCATAATGTTAAAATAGTAAATGTTTGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTCTATTTTTACGTCATAATGTTAAAATAGTAAATGTTTGTTTA  200

seq1  AAATAAGATTCTAAGATAGAATATTTTTCTGTATGTTTATGATGTATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGATTCTAAGATAGAATATTTTTCTGTATGTTTATGATGTATGTA  250

seq1  AGAGTTTTCTCAAAAAGTTCAGGACCAATTTTTATGATTTCCTTAAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTCTCAAAAAGTTCAGGACCAATTTTTATGATTTCCTTAAGGTT  300

seq1  TCAGATTTATGATACTCCTAAGAAAACTCAACCATTTCACAATAATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTATGATACTCCTAAGAAAACTCAACCATTTCACAATAATTACA  350

seq1  GATGCATTTGACACTATCTTAGTTTCAATGTTTTTTCTTACTATTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATTTGACACTATCTTAGTTTCAATGTTTTTTCTTACTATTTTCTG  400

seq1  TTTTCTACTGGTACATATATACATTACTGAACAAGTTGTAACAAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTGGTACATATATACATTACTGAACAAGTTGTAACAAAAGAAA  450

seq1  ATTTAAATTTTCATTAATATACTAATCACTAATTCATAAAATGTAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATTTTCATTAATATACTAATCACTAATTCATAAAATGTAAAAAG  500

seq1  TAGATCCAGATATCTGATTAAAATCCTACGAGCTTTAATGGGTGTCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCAGATATCTGATTAAAATCCTACGAGCTTTAATGGGTGTCACTA  550

seq1  TATGTCACCTGAATAAATTCTGCATTATTTTATTGCTCTGATTATAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACCTGAATAAATTCTGCATTATTTTATTGCTCTGATTATAATTA  600

seq1  CATATTCATAGTTAATGAACTATGGTAATTTCATTTAGAAAAATAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCATAGTTAATGAACTATGGTAATTTCATTTAGAAAAATAGGAAA  650

seq1  ATTTCATAAGACTGACAGAACATATAGAACTAAGAATAATAAAACTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAAGACTGACAGAACATATAGAACTAAGAATAATAAAACTGGAA  700

seq1  TTCCTAATAAAGAGTTCTTGAAACTATAACTAGATAATCATTAAAATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATAAAGAGTTCTTGAAACTATAACTAGATAATCATTAAAATCAC  750

seq1  ATGTTCATTTTAATGATATTACATTTAAAAAATAACATTTTTTATAATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATTTTAATGATATTACATTTAAAAAATAACATTTTTTATAATGC  800

seq1  AGAATAAACTTAACAATATCACAGTGGAAAATATGTAATTCAGTTACTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAACTTAACAATATCACAGTGGAAAATATGTAATTCAGTTACTTG  850

seq1  ATAAGAAAATATGTAAATTAAATTTATTTCTTGCATCGCAATACAAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAATATGTAAATTAAATTTATTTCTTGCATCGCAATACAAAATT  900

seq1  ATCCATCAACACCACAAACAAAATACCCAAGATATAATTGTCAGAAATGA  950
      ||||||| ||||||||||| |||||||| |||||||||||||||||||||
seq2  ATCCATC-ACACCACAAAC-AAATACCC-AGATATAATTGTCAGAAATGA  947

seq1  TCCTAGAATGGATCTGCAAAATATAATTCAGAGTCCTTGTAAGGAAAGTC  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCTAGAATGGATCTGCAAAATATAATTCAGAGTCCTTGTAAGG-AAGTC  996

seq1  CAAGAAAACAAGTATCTTAATCTTGTGACCTCCAATTTTTCAAAAACAGA  1050
      ||||||||| ||||||||||||||||||||||||  ||||||||| ||||
seq2  CAAGAAAAC-AGTATCTTAATCTTGTGACCTCCA--TTTTCAAAACCAGA  1043

seq1  GACTTGTTCTTGGGAATTTTTTTTTGTACCTCTGCCAG  1088
      |||||||| || |||  |||||||||| ||||||||||
seq2  GACTTGTTTTTTGGA--TTTTTTTTGT-CCTCTGCCAG  1078