BAC Information

Click to search

BAC

Clone NameB6Ng01-057G02
Chromosome4 (Build37)
Map Location 85,237,747 - 85,361,044
singlet/doubletdoublet
Overlap geneA930009N24
Upstream geneLOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303, Sh3gl2
Downstream geneLOC668052, Adamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057G02.bB6Ng01-057G02.g
ACCDH879266DH879267
length1,082595
definitionDH879266|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G02, 5' end.DH879267|Mus musculus domesticus DNA, BAC clone: B6Ng01-057G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,237,747 - 85,238,837)(85,360,461 - 85,361,044)
sequence
gaattcatagtgccgaggcctgaaggagcatatttcaaatgtccctggag
tttatttcattgatggtgaaaaaaaacccacaagaacattcagacatagc
cccatgtgctagtgtttatgcaagtctgctttatataaaaatctcatttt
tatttaaaaagaaatcaattcactgaagatgatggctaagaatactatga
ttataaagtacaagcaatgatttcactgaccaagaagaggtcttttgata
ggaaggtctgctaatgaccatctgctaagtagggtcagaacaaggtgtgt
gttatataaagtcaggggaagtgagctctcaacccccttacagaagaagg
catacagggaaaatttattagaattatcatttttaaacaaattatgattt
tttttgtctcacatgaaagttggtagcaacactctctcttgatcaagtat
tgtgtttctttggcttttctccatttttgctttccaaggaattaattttt
aacccttgttttagaaccaaataattctcaccttttcctgtgtgaaatta
aatacttgtaactgcataggtgttatatatactgtcaaaatccagctttc
atccttagtggggattctggcaaccattaaaaatgtatggtttgtgtgag
ataaacatacatcccaaaataaccttaaaattatttattaaaacccttca
tgttcatttcctaacaagctaaatgtgagcaaaaatgaattactctctta
agctcacccaactagatacataatcctcagaaattccctcataattgagt
atccttgtttggtagtctacatcacaatcacatttatttgtttaatcaat
gggatgttttgacttcctttatttaattgctagtcaaatcagttgattga
tattcaataactatattgtacagagtacagtttatgctcatattgttcct
gaccagacctcctccttctcacactagggacctcaaagctgatgattgtc
agcatatttttcacatagtgtagttcaggatatttgacttacagcttatt
tggtttaactgagtttggagattatttaattt
gaattcactggtcttacttaccaaagctcagcccagagcggtattattag
gcaatggtgaaaatccaaagagttgcagtctcatggaaggtccttgtaga
catgttcacaaagagaatgatgtagctctgttttcttccttccttccttc
cttgctttctttcttccttccttccttccttccttcctttctttctttct
ttctttctttcttttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttctttttggattctttt
tctttaattagatattttcttcatttacatttcaaatgctatcccgaaag
atccctataccctcccctccccctgctcccctacctacccactcccactt
cttagccctggtattcccctgtactggggcatataaactttgcagtacca
aggggcctctcttcccagggatggcagactaggccatcttctgctacata
tgcagctagagacatgagctctgggatactggttagttcatgttgttgtt
ccacctatcggttgcagacccttcagctccttggtgcttctctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85237747_85238837
seq2: B6Ng01-057G02.b_48_1129

seq1  GAATTCATAGTGCCGAGGCCTGAAGGAGCATATTTCAAATGTCCCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTGCCGAGGCCTGAAGGAGCATATTTCAAATGTCCCTGGAG  50

seq1  TTTATTTCATTGATGGTGAAAAAAAACCCACAAGAACATTCAGACATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATTGATGGTGAAAAAAAACCCACAAGAACATTCAGACATAGC  100

seq1  CCCATGTGCTAGTGTTTATGCAAGTCTGCTTTATATAAAAATCTCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTGCTAGTGTTTATGCAAGTCTGCTTTATATAAAAATCTCATTTT  150

seq1  TATTTAAAAAGAAATCAATTCACTGAAGATGATGGCTAAGAATACTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAAAGAAATCAATTCACTGAAGATGATGGCTAAGAATACTATGA  200

seq1  TTATAAAGTACAAGCAATGATTTCACTGACCAAGAAGAGGTCTTTTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGTACAAGCAATGATTTCACTGACCAAGAAGAGGTCTTTTGATA  250

seq1  GGAAGGTCTGCTAATGACCATCTGCTAAGTAGGGTCAGAACAAGGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTCTGCTAATGACCATCTGCTAAGTAGGGTCAGAACAAGGTGTGT  300

seq1  GTTATATAAAGTCAGGGGAAGTGAGCTCTCAACCCCCTTACAGAAGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATAAAGTCAGGGGAAGTGAGCTCTCAACCCCCTTACAGAAGAAGG  350

seq1  CATACAGGGAAAATTTATTAGAATTATCATTTTTAAACAAATTATGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGGAAAATTTATTAGAATTATCATTTTTAAACAAATTATGATTT  400

seq1  TTTTTGTCTCACATGAAAGTTGGTAGCAACACTCTCTCTTGATCAAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTCACATGAAAGTTGGTAGCAACACTCTCTCTTGATCAAGTAT  450

seq1  TGTGTTTCTTTGGCTTTTCTCCATTTTTGCTTTCCAAGGAATTAATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTTTGGCTTTTCTCCATTTTTGCTTTCCAAGGAATTAATTTTT  500

seq1  AACCCTTGTTTTAGAACCAAATAATTCTCACCTTTTCCTGTGTGAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTGTTTTAGAACCAAATAATTCTCACCTTTTCCTGTGTGAAATTA  550

seq1  AATACTTGTAACTGCATAGGTGTTATATATACTGTCAAAATCCAGCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGTAACTGCATAGGTGTTATATATACTGTCAAAATCCAGCTTTC  600

seq1  ATCCTTAGTGGGGATTCTGGCAACCATTAAAAATGTATGGTTTGTGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGTGGGGATTCTGGCAACCATTAAAAATGTATGGTTTGTGTGAG  650

seq1  ATAAACATACATCCCAAAATAACCTTAAAATTATTTATTAAAACCCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATACATCCCAAAATAACCTTAAAATTATTTATTAAAACCCTTCA  700

seq1  TGTTCATTTCCTAACAAGCTAAATGTGAGCAAAAATGAATTACTCTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTTCCTAACAAGCTAAATGTGAGCAAAAATGAATTACTCTCTTA  750

seq1  AGCTCACCCAACTAGATACATAATCCTCAGAAATTCCCTCATAATTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACCCAACTAGATACATAATCCTCAGAAATTCCCTCATAATTGAGT  800

seq1  ATCCTTGTTTGGTAGTCTACATCACAATCACATTTATTTGTTTAATCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTTTGGTAGTCTACATCACAATCACATTTATTTGTTTAATCAAT  850

seq1  GGGATGTTTTGACTTCCTTTATTTAATTGCTAGTCAAATCAGTTGATTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTTTGACTTCCTTTATTTAATTGCTAGTCAAATCAGTTGATTGA  900

seq1  TATTCAATAACTATATTGTACAGAGTACAGTTTATGCTCATATTGTTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATAACTATATTGTACAGAGTACAGTTTATGCTCATATTGTTCCT  950

seq1  GACCAAGACCTCCTCCTTCTCCACACTAGGGACCTCAAAGCTGATGATTG  1000
      |||| ||||||||||||||| |||||||||||||||||||||||||||||
seq2  GACC-AGACCTCCTCCTTCT-CACACTAGGGACCTCAAAGCTGATGATTG  998

seq1  TCAGCATATCTTTCACAATAGTTGTAGTTCAGAATATGTGACTACAAGCT  1050
      ||||||||| |||||| |||| |||||||||| |||| |||||   ||||
seq2  TCAGCATATTTTTCAC-ATAG-TGTAGTTCAGGATATTTGACTTACAGCT  1046

seq1  TATTGGTTTTACCTTGAGTTT-GAGATTATTATATTTAATTT  1091
      |||| | |||| | ||||||| |||||     ||||||||||
seq2  TATTTGGTTTAAC-TGAGTTTGGAGAT-----TATTTAATTT  1082

seq1: chr4_85360461_85361044
seq2: B6Ng01-057G02.g_67_650 (reverse)

seq1  CCAAGGAGCTGAAGGGGTCTGCAACCCGATAGGTGGAACAACAACATGAA  50
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  CCAAGGAGCTGAA-GGGTCTGCAA-CCGATAGGTGGAACAACAACATGAA  48

seq1  CTAACCAGTATCCCCAGAGCTCATGTCTCTAGCTGCATATGTAGCAGAAG  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGTAT-CCCAGAGCTCATGTCTCTAGCTGCATATGTAGCAGAAG  97

seq1  ATGGCCTAGTCTGCCATCCCTGGGAAGAGAGGCCCCTTGGTACTGCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTAGTCTGCCATCCCTGGGAAGAGAGGCCCCTTGGTACTGCAAAG  147

seq1  TTTATATGCCCCAGTACAGGGGAATACCAGGGCTAAGAAGTGGGAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGCCCCAGTACAGGGGAATACCAGGGCTAAGAAGTGGGAGTGGG  197

seq1  TAGGTAGGGGAGCAGGGGGAGGGGAGGGTATAGGGATCTTTCGGGATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGGGGAGCAGGGGGAGGGGAGGGTATAGGGATCTTTCGGGATAGC  247

seq1  ATTTGAAATGTAAATGAAGAAAATATCTAATTAAAGAAAAAGAATCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAATGTAAATGAAGAAAATATCTAATTAAAGAAAAAGAATCCAAA  297

seq1  ---AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  347
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  347

seq1  GAAGAAGAAGAAGAAGAAGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAAGAAGAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAA  397

seq1  GGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGCAAGGAAGGAAGGAAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGCAAGGAAGGAAGGAAGG  447

seq1  AAGAAAACAGAGCTACATCATTCTCTTTGTGAACATGTCTACAAGGACCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAGAGCTACATCATTCTCTTTGTGAACATGTCTACAAGGACCT  497

seq1  TCCATGAGACTGCAACTCTTTGGATTTTCACCATTGCCTAATAATACCGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAGACTGCAACTCTTTGGATTTTCACCATTGCCTAATAATACCGC  547

seq1  TCTGGGCTGAGCTTTGGTAAGTAAGACCAGTGAATTC  584
      |||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTGAGCTTTGGTAAGTAAGACCAGTGAATTC  584