BAC Information

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BAC

Clone NameB6Ng01-057J22
Chromosome4 (Build37)
Map Location 70,998,847 - 70,999,496
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk5rap2, Megf9, LOC100039565
Downstream geneLOC100039979, LOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057J22.bB6Ng01-057J22.g
ACCDH879435DH879436
length1,269650
definitionDH879435|Mus musculus domesticus DNA, BAC clone: B6Ng01-057J22, 5' end.DH879436|Mus musculus domesticus DNA, BAC clone: B6Ng01-057J22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccatcccactctcaccaatggacaggttatggaaacagaaaat
aaacagaggcacaatgaaactaacagaatttatgaaccaaatggatttaa
caaatatttatagaaaatttcatcttaaaataaaagaatgtaccttcttc
tcagcacctcatgctactttctccaaaattgatgatataatcagtcacaa
aacagacctcaacctataaaaaaaaacattgaaataatcccttgcaatag
taataaaaactgcatggtatttatatagtgacaggtaggtagatcaatgg
aatagtattgaagacctagaaatgaacacacacatggtaacttaattttt
gacaaaggagccaaaacaatccagtggaaaacagacagcacttttaataa
atggtgctggttcgactggtggtaaacatgtagaagaatgcaaattgata
caaacttatctccctgtataaagctcaagtccaagtggatcaaggacctc
cacataaagccagatacactgagactaatagaagagaaagtgggaaaagc
cttgaacacatgggcacaggggaaaatttcctgagcagaacaccaatggc
ttatatatactctaagatcaagaatcaatacatttattaaaattcttggc
tgaattgaaaacaaagaaaggaatagacaaatgggacctcatgaacttgc
aaagcttctgtaaggatcaggacactgtcaataggacaaaatggcaacca
acagattgggtaaagatctttacctattttacatccaatagacagctaaa
atccgatatatacacagaactcaagaagatagacaccagagaaccaaata
actctatcaaaataaaatggggaacagagctaaatagagattctcaagtg
aggaatcttgaatggccgagaagcacctaaagaaatgttcaatatcttta
gtcacagagaaacacaaatcaaaatgaccctggaattccacctcacacat
tcagatgcctaaagtcagactcaagtgatagtagatgctggagaggatgt
ggggaaaggagaaacttcacatattggtggattgcatttggtacaccact
tgaaatcagtctggcacttctgagaactgacatgtactattgaggacagc
ttatcagtctgggcatactcgagagtccactgtataggacattgctgaca
atcagccattatattgcgacacctgcaacaagtctcccgaaagtgacgaa
tgggcctgttccagatgat
ttttaagtacaagaaggaggaggaggaagaagaagggggaggaggaggag
atgaggaggagaaaaagaagaacagattctgtagactagagacagctttg
attcatgtctagctattaaattctttattcaaattgtaaaataaaaaaga
gattgcccagggattctaacaaagttgttgattttaagaaatcatagcca
aattttcaccgtgataatgttctgtcattatattttaaaagaattcctgt
cttgctcacttgaatattgaaatgttacggtaggtatctaggatttactc
tattataaacagataagtgttacatgtggagtcaagttgatttttataaa
aaagaaatcatcactttcttcctactcataaaatacgtctgactatcaaa
tgtgtggtagtgtctattttaagcaatttcccacttctttttggatacaa
acttatagctatgtaattgaagtcaattttattttatgtggaaatagcat
taagtctcataacgtataggccaatctcacaaaactgctacagaattgtg
aatcacaaatcaacctgtcacatatgcttttgggtatcacatctcacaaa
gcatagagaagtagtttacttataaggtgctcattcaaatgatataactg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70998847_70999496
seq2: B6Ng01-057J22.g_75_724 (reverse)

seq1  CAGTTATATCATTTGAATGAGCAACCTTATAAGTAAACTACTTCTCTATG  50
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGTTATATCATTTGAATGAGC-ACCTTATAAGTAAACTACTTCTCTATG  49

seq1  CTTTGTGAGATGTGATACCCAAAAGCATATGTGGCAGGTTGATTTGTGAT  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTTGTGAGATGTGATACCCAAAAGCATATGTGACAGGTTGATTTGTGAT  99

seq1  TCACAATTCTGTAGCAGTTTTGTGAGATTGGCCTATACGTTATGAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTCTGTAGCAGTTTTGTGAGATTGGCCTATACGTTATGAGACTT  149

seq1  AATGCTATTTCCACAT-AAATAAAATTGACTTCAATTACATAGCTATAAG  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATGCTATTTCCACATAAAATAAAATTGACTTCAATTACATAGCTATAAG  199

seq1  TTTGTATCCAAAAAGAAGTGGGAAATTGCTTAAAATAGACACTACCACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCCAAAAAGAAGTGGGAAATTGCTTAAAATAGACACTACCACAC  249

seq1  ATTTGATAGTCAGACGTATTTTATGAGTAGGAAGAAAGTGATGATTTCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATAGTCAGACGTATTTTATGAGTAGGAAGAAAGTGATGATTTCTT  299

seq1  TTTTATAAAAATCAACTTGACTCCACATGTAACACTTATCTGTTTATAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAAAATCAACTTGACTCCACATGTAACACTTATCTGTTTATAAT  349

seq1  AGAGTAAATCCTAGATACCTACCGTAACATTTCAATATTCAAGTGAGCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAATCCTAGATACCTACCGTAACATTTCAATATTCAAGTGAGCAA  399

seq1  GACAGGAATTCTTTTAAAATATAATGACAGAACATTATCACGGTGAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAATTCTTTTAAAATATAATGACAGAACATTATCACGGTGAAAAT  449

seq1  TTGGCTATGATTTCTTAAAATCAACAACTTTGTTAGAATCCCTGGGCAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATGATTTCTTAAAATCAACAACTTTGTTAGAATCCCTGGGCAAT  499

seq1  CTCTTTTTTATTTTACAATTTGAATAAAGAATTTAATAGCTAGACATGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTTATTTTACAATTTGAATAAAGAATTTAATAGCTAGACATGAA  549

seq1  TCAAAGCTGTCTCTAGTCTACAGAATCTGTTCTTCTTTTTCTCCTCCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTGTCTCTAGTCTACAGAATCTGTTCTTCTTTTTCTCCTCCTCA  599

seq1  TCTCCTCCTCCTCCCCCTTCTTCTTCCTCCTCCTCCTTCTTGTACTTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCTCCTCCCCCTTCTTCTTCCTCCTCCTCCTTCTTGTACTTAAA  649

seq1  A  650
      |
seq2  A  650