BAC Information

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BAC

Clone NameB6Ng01-058C07
Chromosome4 (Build37)
Map Location 146,553,686 - 146,554,431
singlet/doubletsinglet
Overlap geneOTTMUSG00000010657
Upstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570
Downstream geneLOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058C07.bB6Ng01-058C07.g
ACCDH879801DH879802
length1,1811,107
definitionDH879801|Mus musculus domesticus DNA, BAC clone: B6Ng01-058C07, 5' end.DH879802|Mus musculus domesticus DNA, BAC clone: B6Ng01-058C07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgatgaattctcagacagccattttcagtaaaggatttgtca
cattcattacatttgtaaggtttctctcctgtatgaattatctgatgaat
actaagatgtgattttcaggtaaagcatttgtcacattcattacatttgt
aaggtgtctctcctgtatgaattctctgatgccttctcagactgtgtttg
tcactaaagcatttgtcgcattcattgcatttgtaaggttctctcctgaa
tgaattttctgatgaatactaagatggcattgttgggtaaagcatttgtc
acattcactgcatttgtacagtttctctcctgtatgaattctctgatgaa
tactaagatgtgattttcgggtaaagcatttgtcgcattcattgcattta
taaggtttctctcctgtatgaattctctgatgccttctcagactgttttt
ctcagtaaaacatttgtcacattcactacatttgtaaggtttctctcctg
catgaattctatgatgaactctcagagagcctttgtgagtaaagcatttg
tcacattcactacatttgtaaggtttctctcctgcatgaattctatgatg
aactctaagactgcctttgtcagtaaagcatttgtcacattcactgcatt
tgtacagtttctctcctgtatgaattctctgatgaatactaagatgtgat
tttcgggtaaagcatttgtcgcattcattgcatttataaggtttctctcc
tgtatgaattctctgatgccttctcagactgtttttctcagtaaaacatt
tgtcacattcactacatttgtaggtttctctcctgcatgaatttatgatg
aactctcagagagcctttgtgagtaaagcattgtcacattcactacattt
gtaagtttctctcctgcatgaattctatgatgaactctcagatagctttg
tcagtaaagcatttgtgcattcactacatttgtaaggttttctcctgcat
gaattctatgatgaaccttagactgcctttggtcagtaaagcattggcca
cctcactgcatggtacggttttcttccggttgaatcctcgatgaaatccc
agacatgctttgccagaagacatgtgcattcacatcattgaagctcctcc
cgaatgatctccaagaaatacaaagaagttg
gaattcatacaggagagaaaccttacaaatgtagtcaatgtgacaaatcc
tttactgaaaatggccatctgagaattcatcagagaaatcatacaggtga
gaaaccttacaaatgtagtcaatgtgacaaatcctttactgaaaatggcc
atctgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtgacaaatgctttactaaaaaattcagtttgaggattcatca
gagaattcatacaggagagaaaccttacaaatgcactgaatgtgacaaat
gctttactttcaaaggcagtctgaggattcatcagagaattcatacagga
gagaaaccctacaaatgtagtgaatgtgacaaatcctttactgaaaatgg
ctgtttgagaattcatcagagaattcatacaggagagaaaccttacaaat
gcactgaatgtgacaaatgctttactttcaaaggcagtctgaggattcat
cagagaattcatacaggagagaaaccttacaaatgcactgaatgtgacaa
atcctttactgaaaagggcaaactgagaattcatcagagaattcatacag
gagagaaaccttacaaatgtagtgaatgtgacaaatgctttactgaataa
ggacatcagagaattcatacaggagagataccttacaaatagtttgtatg
tgacaaatacaatacaatgtcagtctgagaaatcatcagtttttaataca
gtagagaatatttataaatgaagtgaacgagacaatcctttaccaagata
tatcatcttaaaaatcattagagaatacttacagaagagaaatttttcaa
ttatattgaaggtatgattcctttactcttggcctatttcctagatgtaa
cagtgatacttacaggatacaaacttaactcatgcattgtatgaagaata
tttttgacttcatttcagtcaagagatatctaataactttttaggggaag
tatttcttttggggaagtgtgcctggggttaatcctggtttattcttggc
cattgaggctccccactataagatagatgaatagaaatcatgtgaaaact
ttctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146553686_146554431
seq2: B6Ng01-058C07.g_448_1175

seq1  CAAATCCTTTACTGAAAATGGCTGTTTGAGAATTCATCAGAGAATTCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTTTACTGAAAATGGCTGTTTGAGAATTCATCAGAGAATTCATA  50

seq1  CAGGAGAGAAACCTTACAAATGCACTGAATGTGACAAATGCTTTACTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGAAACCTTACAAATGCACTGAATGTGACAAATGCTTTACTTTC  100

seq1  AAAGGCAGTCTGAGGATTCATCAGAGAATTCATACAGGAGAGAAACCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGTCTGAGGATTCATCAGAGAATTCATACAGGAGAGAAACCTTA  150

seq1  CAAATGCACTGAATGTGACAAATCCTTTACTGAAAAGGGCAAACTGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCACTGAATGTGACAAATCCTTTACTGAAAAGGGCAAACTGAGAA  200

seq1  TTCATCAGAGAATTCATAAAGGAGAGAAACCTTACAAATGTAGTGAATGT  250
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGT  250

seq1  GACAAATGCTTTACTGAAAAAGGCCATCAGAGAATTCATACAGGAGAGAT  300
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  GACAAATGCTTTACTGAATAAGGACATCAGAGAATTCATACAGGAGAGAT  300

seq1  AGCTTACAAATAGTTTGTATGTGACAAATACAATACAATGTCAGTCTGAG  350
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACAAATAGTTTGTATGTGACAAATACAATACAATGTCAGTCTGAG  350

seq1  AAATCATCAGTTTTTAATACAGTAGAGAATATTTATAAATGAAGTGAATG  400
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAATCATCAGTTTTTAATACAGTAGAGAATATTTATAAATGAAGTGAACG  400

seq1  AGACAATCCTTTACCAAGATATATCATCTTAAAAATCATTAGAGAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCCTTTACCAAGATATATCATCTTAAAAATCATTAGAGAATACT  450

seq1  TACAGAAGAGAAACTTTTCAATTATATCGAAGGTATGAATCCTTTACTCT  500
      ||||||||||||| ||||||||||||| |||||||||| |||||||||||
seq2  TACAGAAGAGAAATTTTTCAATTATATTGAAGGTATGATTCCTTTACTCT  500

seq1  TGGCCTATTTCCTAGAATGTTAACAGTGAATACTTACAGGATACAAACTT  550
      ||||||||||||||| ||| |||||||| |||||||||||||||||||||
seq2  TGGCCTATTTCCTAG-ATG-TAACAGTG-ATACTTACAGGATACAAACTT  547

seq1  AACTCATGCATTGTATGAAGAAATATCTTTGACTTCATTTCAGGTCAAAG  600
      |||||||||||||||||||| ||||| ||||||||||||||| ||| |||
seq2  AACTCATGCATTGTATGAAG-AATATTTTTGACTTCATTTCA-GTC-AAG  594

seq1  AGAATATCTAATAACTTTTTAGGCAAAGTATTTCTGTTGGGGAAAGTGTG  650
      || ||||||||||||||||||||  |||||||||| |||||| |||||| 
seq2  AG-ATATCTAATAACTTTTTAGGGGAAGTATTTCTTTTGGGG-AAGTGT-  641

seq1  GCCTGTGTTTTATTCACGTTCTATTCTTGACAACAATTGAGGCTCCACAC  700
      ||||| | || || |  ||| ||||||||    | ||||||||||| |||
seq2  GCCTGGGGTTAATCCTGGTT-TATTCTTG---GCCATTGAGGCTCCCCAC  687

seq1  TAGAGAATTAGTATGATTATGAAAATCATGTGAAAACTTTCATGCA  746
      || | |  ||| ||||  ||  ||||||||||||||||||| ||||
seq2  TATA-AGATAG-ATGA--ATAGAAATCATGTGAAAACTTTC-TGCA  728