BAC Information

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BAC

Clone NameB6Ng01-058D19
Chromosome4 (Build37)
Map Location 54,446,776 - 54,447,382
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058D19.bB6Ng01-058D19.g
ACCDH879870DH879871
length1,271667
definitionDH879870|Mus musculus domesticus DNA, BAC clone: B6Ng01-058D19, 5' end.DH879871|Mus musculus domesticus DNA, BAC clone: B6Ng01-058D19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcaggacagttcacaggttagcaggcagcaaccttgagccact
gaaaaacacttcacggatacaccagcagtccagcttggtagagtcaggtt
aacaacagcagtaactcgacctaacagaaacagccttggcttgagcagga
gggacccggagggacaccaggagacgttctcagttgtgtttctctcagag
aagcaaagatcagtgaagacccgagatccacagcattgcacagctggcag
taccagtaagccaatctctgtctctgtcactccatagagtcctatttata
ctctctaaatatcacgtgtcctccacgtgccttgcctccgaacatgcatt
caatcagcccaagtccttggaaacagcaataaactgcagtacaccaccag
aagttttttggtgtgtttctttctatgacattccaacaaatggagctcaa
gtatgcgatgcaaggtaaaccaatacatgtttgtcgttaggaaagaatcc
ttcacacacgtcctttcacatgcttgctttagcaaaacatcctctctcct
gtgtctgcttcagcaaaatgatccttcatgagcctgccttagcttttcac
tccagtgtccactttaacgaaacattccttcacatgtgtatcccagcaaa
acaccatccaaccaacttcctgaagaagcttaggggtccgcttgcctagc
ctttcttttctagtcagctttgtcattcacgtaacttagacaaatattgt
tttgtttatttggctggtttttgtttgattttcgaaacagggtcttactt
tgtggccatggttggcctaaatctctaaatgtagccaagactggattcaa
atcctcagagtttacttcccaagtgctagaattagagatttgtgccacca
tctgtggctctgaacatgtaagaattccttacttttcctacacttcatat
aagcacttagcctacttgcacagttgctaaggattttggaggcccacatt
caggaacatctgcttcccccgagggcagaactctctgactcactccactg
ggcactacatctgtctagcatggacatacacgcttcggctggcatcacat
tctcattctggcctctcttaccttctcaggagagtctcaatttctcatga
atcggattttttataaactttctttttctgggatcatgggttatgattaa
tcttaagtttcttataatcaagctatctggaattctactccggcctgggc
aatcgacctttcatcattgtg
gaattctttaagtggactggagtgaaggtgaaagcattgggagctcatga
tgttaaaagcgggggcatagaaagcaaagtcaccctggtcataacacaga
agttgatgagggtctagaacacccaggatataaagaggagccaccatgaa
tccaacaggagacagaatgggttaatatagacactgtaggaataagggcc
ttcacaagaagagaggtgaacaaatatcaagaggcagtactgagaaccaa
aagaaccagcagtcctacttcctgataccacacaagaaaccatgtgagaa
aagcagaagcttccatttgagagggctaagcagaaaatcatgtcttaggg
gagtatatattaggatattagtatatactaatatatcatattttatatat
agtatatactataggtcatattgtatatatatcatataatgtattattta
ctaattataattagtatattactaatatattattaatatatattagtata
tactaatatatactagggtatattaggatcaatatttatagtatagttaa
tataggggaatttgtttatgataaatggtttccagagatcttactgggaa
cagcagagcagaagaataagtttaggagttagtattgagggagttttagc
agaagggggatttaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54446776_54447382
seq2: B6Ng01-058D19.g_127_735

seq1  GCGGGGGCATAGAAAGCAAAGTCACCCTGGTCATAACACAGAAGTTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGCATAGAAAGCAAAGTCACCCTGGTCATAACACAGAAGTTGATG  50

seq1  AGGGTCTAGAACACCCAGGATATAAAGAGGAGCCACCATGAATCCAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTAGAACACCCAGGATATAAAGAGGAGCCACCATGAATCCAACAG  100

seq1  GAGACAGAATGGGTTAATATAGACACTGTAGGAATAAGGGCCTTCACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAATGGGTTAATATAGACACTGTAGGAATAAGGGCCTTCACAAG  150

seq1  AAGAGAGGTGAACAAATATCAAGAGGCAGTACTGAGAACCAAAAGAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGTGAACAAATATCAAGAGGCAGTACTGAGAACCAAAAGAACCA  200

seq1  GCAGTCCTACTTCCTGATACCACACAAGAAACCATGTGAGAAAAGCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCTACTTCCTGATACCACACAAGAAACCATGTGAGAAAAGCAGAA  250

seq1  GCTTCCATTTGAGAGGGCTAAGCAGAAAATCATGTCTTAGGGGAGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATTTGAGAGGGCTAAGCAGAAAATCATGTCTTAGGGGAGTATAT  300

seq1  ATTAGGATATTAGTATATACTAATATATCATATTTTATATATAGTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGATATTAGTATATACTAATATATCATATTTTATATATAGTATATA  350

seq1  CTATAGGTCATATTGTATATATATCATATAATGTATTATTTACTAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGTCATATTGTATATATATCATATAATGTATTATTTACTAATTAT  400

seq1  AATTAGTATATTACTAATATATTATTAATATATATTAGTATATACTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTATATTACTAATATATTATTAATATATATTAGTATATACTAATA  450

seq1  TATACTAGGGTATATTAGGATCAATATTTATAGTATAGTTAATATAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAGGGTATATTAGGATCAATATTTATAGTATAGTTAATATAGGGG  500

seq1  AATTTGTTTATGATAAATGG-TTCCAGAGATCTTACTGGGAACAGCAGAG  549
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTTGTTTATGATAAATGGTTTCCAGAGATCTTACTGGGAACAGCAGAG  550

seq1  CAGAAGAATAAG-TTAGGAGTTAGGATTGAGGGAGTTTGAGCAGAAAGGG  598
      |||||||||||| ||||||||||| ||||||||||||| ||||||| |||
seq2  CAGAAGAATAAGTTTAGGAGTTAGTATTGAGGGAGTTTTAGCAGAAGGGG  600

seq1  GATGTAAGG  607
      ||| |||||
seq2  GATTTAAGG  609