BAC Information

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BAC

Clone NameB6Ng01-059B14
Chromosome4 (Build37)4 (Build37)
Map Location 147,154,865 - 147,156,028146,364,654 - 146,365,421
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010694, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059B14.bB6Ng01-059B14.g
ACCDH880486DH880487
length1,1361,071
definitionDH880486|Mus musculus domesticus DNA, BAC clone: B6Ng01-059B14, 5' end.DH880487|Mus musculus domesticus DNA, BAC clone: B6Ng01-059B14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(147,154,865 - 147,156,028)(146,364,654 - 146,365,421)
sequence
gaattcaccccgaagcccaaccctaaaaaagtaatcaatccagtaaagcc
ttttcatgtcactatcacaaaaatgtcataaaagaatttatattgaagag
aaatcctacaaatacaagcaatgtgcttagcgtcaggtgcatctgtggac
agctagaagtgtctttacagccaacttctagacccagtgaggacactcct
catctgtaggcaacagcccctgcatctgttgccatggcacccaacatggc
accacttccctttcacatgcttcccattctcgtgcactggataaaagagt
gttccctcattgcacagacccttctcttcttctgaactctcaccattctc
agaggctctttctgccaataaatcctcccacatgacacctgaagcttggt
gtgatatgtccaggattttgcctgcctcttctaacaaatatgaagaaatg
atttctgttaaccttgtgactcatgcagtattgtttctgttacataaaca
aattcatgataaagacaaattctgtgagtaatcttttagatgcctttaca
ggaattaatgcattcacaagtaaatgtaggaaagaactcacacaagagaa
acacactattcatgtgaccttttgatgaagactaaacatcatagttgtct
ctcgtgatcattaatagttgtgggagtttgtattttgaaatatttgaagc
caattttaaagtttaatgtatgtgaggcaaatccattcacaaaactttat
taagccattgttatactccttctgtggatcctggtcatcttcttttgcat
tttcacatggtgatccccacccccaatgtatagcatgcatgctgatcatc
tctgtgatccattgtttatttaatatcagactgtgtgtactcatactttc
caagtaagtgcttgtgagggtgttgtgtggttgttcctggtttagttttc
agattttcacaaatcctagagatgatgcttgctatcagctcatttggatg
tcagtcattggcaagctactttgactcttttatttcatgtgtcagcctct
gagtacatgttcatggtagagatgtaactctactttactgttttgcacat
atttaccagttcatgttccatgttttatgagagaat
gaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgc
tttaccaaacaatccaaacttagtattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtgaaaaatgctttaatgaaaaaaaca
gtctgaaaattcatcagagaattcatacaggagagagaccttacaaatgt
agtgaatgtgacaaatgcttttcccgaaaattctatcttggtattcatca
gagaattcatacaggaaagaaaccttacaaatgtagtgaatgtgacaaat
gctttacccaaaaatcctgtcttaatattcatcagagaattcatgcagga
gagaaaccttacaaatgcagtgaatgtgacaaatgctttactacaaaagg
caatctgataattcatcagagaattcatacaggagagaaaccttacaaat
gtagtgaatgtgacaaatgctttacccagaaatcccatcttagtattcat
cagaaaattcatacaggagagaaaccttacaaatagattgtatgtgacaa
atacaatactcacaatgtcagtcttagaaatcatcagttatttcatacag
tagagaatctttataaatgaagtgaatgagacaatcctttaccaagatat
atcatctcaaaattcattagagaatacttagagaagacaaacttttcaaa
tatattgtaggtatgaatcctttccttttggcctagttcctagactgtaa
cagtgaatacttacaggctagaaacttaactcatgcattgtatgaagaaa
tagctttgacttcatttcaggtcagagagaacatctaagaactttttagg
gtaaagtatttctgttagggaaaatgttgtattcttgacaacacttgagg
ctccacactagagaattagtatgatttgaaaatcttgtcaaactttcatg
catgttcaaatctagatatgtaactatttatgtgggagaactctgaatgt
gaaatgtagaagcttcatgacactttttactgtcaccctcaacgtttaag
atgagatagtaagagtcagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147154865_147156028
seq2: B6Ng01-059B14.b_50_1185

seq1  GAATTCACCCCGAAGCCCAACCCTAAAAAAGTAATCAATCCAGTAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCGAAGCCCAACCCTAAAAAAGTAATCAATCCAGTAAAGCC  50

seq1  TTTTCATGTCACTATCACAAAAATGTCATAAAAGAATTTATAATGAAGAG  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTCATGTCACTATCACAAAAATGTCATAAAAGAATTTATATTGAAGAG  100

seq1  AAATCCTACAAATACAAGCAATGTGCTTAGCGTCAGGTGCATCTGTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTACAAATACAAGCAATGTGCTTAGCGTCAGGTGCATCTGTGGAC  150

seq1  AGCTAGAAGTGTCTTTACAGCCAACTTCTAGACCCAGTGAGGACACTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAAGTGTCTTTACAGCCAACTTCTAGACCCAGTGAGGACACTCCT  200

seq1  CATCTGTAGGCAACAGCCCCTGCATCTGTTGCCATGGCACCCAACATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTAGGCAACAGCCCCTGCATCTGTTGCCATGGCACCCAACATGGC  250

seq1  ACCACTTCCCTTTCACACGCTTCCCATCCTCATGGACTGAATAAAAGAGT  300
      ||||||||||||||||| ||||||||| ||| || |||| ||||||||||
seq2  ACCACTTCCCTTTCACATGCTTCCCATTCTCGTGCACTGGATAAAAGAGT  300

seq1  GTTCCCTCATTGCACAGACCCTTCTCTTCTTCTGACCTCTCACCATTCTC  350
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTCCCTCATTGCACAGACCCTTCTCTTCTTCTGAACTCTCACCATTCTC  350

seq1  AGAGGCTCTTTCTGCCAATAAATCCTCCCACATGACACCTGAAGCTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTCTTTCTGCCAATAAATCCTCCCACATGACACCTGAAGCTTGGT  400

seq1  GTGATATGTCCAGGATTTTGCCTGCCTCTTCTAACAAATATGAAGAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATGTCCAGGATTTTGCCTGCCTCTTCTAACAAATATGAAGAAATG  450

seq1  ATTTCTGTTAACCTTGTGACTCATGCAGTATTGTTTCTGTTACATAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTAACCTTGTGACTCATGCAGTATTGTTTCTGTTACATAAACA  500

seq1  AATTCATGATAAAGAAAAATTCTGTGAGTAAGCTTTTAGATGCCTTTACA  550
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  AATTCATGATAAAGACAAATTCTGTGAGTAATCTTTTAGATGCCTTTACA  550

seq1  GGAATTAATGCATTCACAAGTAAATGTAGGAAAGAACTCACACAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAATGCATTCACAAGTAAATGTAGGAAAGAACTCACACAAGAGAA  600

seq1  ACACACTATTCATGTGACCTTTTGATGAAGACTAAACATCATAGTTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTATTCATGTGACCTTTTGATGAAGACTAAACATCATAGTTGTCT  650

seq1  CTCGTGATCATTAATAGTTGTGGGAGTTTGTATTTTGAAATATTTGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGATCATTAATAGTTGTGGGAGTTTGTATTTTGAAATATTTGAAGC  700

seq1  CAATTTTAAAGTTTAATGTATGTGAGGCAAATCCATTCACAAAACTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAAAGTTTAATGTATGTGAGGCAAATCCATTCACAAAACTTTAT  750

seq1  TAAGCCATTGTTATACTCCTTCTGTGGATCCTGGTCATCTTCTTCTGCAT  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAGCCATTGTTATACTCCTTCTGTGGATCCTGGTCATCTTCTTTTGCAT  800

seq1  TTTCACATGGTGATCTCCCCCCCCCCACAATGTATAGCATGGATGCTGAT  850
      ||||||||||||||    |||| ||| |||||||||||||| ||||||||
seq2  TTTCACATGGTGAT----CCCCACCCCCAATGTATAGCATGCATGCTGAT  846

seq1  CATCTCTGTGATCCATTGTTTATTTAAATATCAGACTGTGTGTACTCATA  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATCTCTGTGATCCATTGTTTATTT-AATATCAGACTGTGTGTACTCATA  895

seq1  CTTTCCAAGTAAGGTGTTTGTGAAGGGTGTTGTGTGGTTGTTCCTGGTTT  950
      |||||||||||| ||| ||||| |||||||||||||||||||||||| ||
seq2  CTTTCCAAGTAA-GTGCTTGTG-AGGGTGTTGTGTGGTTGTTCCTGG-TT  942

seq1  TAGTTTTCAGATTTTCACAAAATCCCTAGAGATGATGCTTGCTATCCAGC  1000
      |||||||||||||||||||||   ||||||||||||||||||||| ||| 
seq2  TAGTTTTCAGATTTTCACAAA--TCCTAGAGATGATGCTTGCTAT-CAG-  988

seq1  CTCATTTGGATGTCAGTCATTGGGCAAGGCTACATTTGAACTCTTTATTT  1050
      ||||||||||||||||||||| ||||| ||||| |||| |||||||  ||
seq2  CTCATTTGGATGTCAGTCATT-GGCAA-GCTAC-TTTG-ACTCTTTTATT  1034

seq1  TCATGTGTCAGCCTCATGAATACATGTCCAATGGTAGAAGATGTAACCCT  1100
      ||||||||||||||| ||| ||||||| | ||||||| ||||||||| ||
seq2  TCATGTGTCAGCCTC-TGAGTACATGTTC-ATGGTAG-AGATGTAACTCT  1081

seq1  AACATTTACTGTTTTGTCAACATATTTAACAATGTTCATGTTCATATGTT  1150
      |   ||||||||||||   ||||||||| ||  ||||||||||  |||||
seq2  A--CTTTACTGTTTTG--CACATATTTACCA--GTTCATGTTC-CATGTT  1124

seq1  TAATAGAAGAGAAT  1164
      |  ||  |||||||
seq2  T--TATGAGAGAAT  1136

seq1: chr4_146364654_146365421
seq2: B6Ng01-059B14.g_394_1139

seq1  TATTCATCAGAGAATTCATACAGGAAAGAAACCTTACAAATGTAGTGAAT  50
      ||||||||||||||||||| ||||| |||||||||||||||| |||||||
seq2  TATTCATCAGAGAATTCATGCAGGAGAGAAACCTTACAAATGCAGTGAAT  50

seq1  GTGACAAATGCTTTACTACAAAAGGCAATCTGATAATTCATCAGAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAATGCTTTACTACAAAAGGCAATCTGATAATTCATCAGAGAATT  100

seq1  CATACAAGAGAGAAACCTCACAAATGTAGTGAATGTGACAAATGCTTTAC  150
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  CATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTAC  150

seq1  CCAGAAATCCCATCTTAGTATTCATCAGAAAATTCATACAGGAGAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATCCCATCTTAGTATTCATCAGAAAATTCATACAGGAGAGAAAC  200

seq1  CTTACAAATAGATTGTATGTGACAAATACAATACTCACAATGTCAGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAATAGATTGTATGTGACAAATACAATACTCACAATGTCAGTCTT  250

seq1  AGAAATCATCAGTTATTTCATACAGTAGAGAATCTTTATAAATGAAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATCAGTTATTTCATACAGTAGAGAATCTTTATAAATGAAGTGA  300

seq1  ACGAGACAATCCTTTACCAAGATATATCATCTCAAAATTCATTAGAGAAT  350
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACAATCCTTTACCAAGATATATCATCTCAAAATTCATTAGAGAAT  350

seq1  ACTTAGAGAAGACAAACTTTTCAAATATATTGTAGGTATGAATCCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAGAAGACAAACTTTTCAAATATATTGTAGGTATGAATCCTTTCC  400

seq1  TTTTGGCCTATTTCCTAGACTGTAACAGTGAATACTTACAGGCTAGAAAC  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCCTAGTTCCTAGACTGTAACAGTGAATACTTACAGGCTAGAAAC  450

seq1  TTAACTCATGCATTGTATGAAGAAATATCTTTGACTTCATTTCAGGTCAG  500
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTAACTCATGCATTGTATGAAGAAATAGCTTTGACTTCATTTCAGGTCAG  500

seq1  AGAGAACATCTAAGAACTTTTTAGGGTAAAGAATTT-TGTTGGGGAAAAT  549
      ||||||||||||||||||||||||||||||| |||| |||| ||||||||
seq2  AGAGAACATCTAAGAACTTTTTAGGGTAAAGTATTTCTGTTAGGGAAAAT  550

seq1  GTTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATTCTTGACAACACTTGAGGCTCCACACTAGAGAATTAGTATGAT  600

seq1  TATGAAAATCTTGTGAAAATATTCATGCAATGTTCAAATCTTAGATAATG  649
      | |||||||||||| ||| | ||||||| ||||||||||| ||||| |||
seq2  T-TGAAAATCTTGTCAAACT-TTCATGC-ATGTTCAAATC-TAGAT-ATG  645

seq1  TCAACTATTTATGTTGGGAGAAACTCTGAAAATGTGAAAATGTAGAAAGC  699
      | ||||||||||| |||||| |||||||  |||||| |||||||| ||||
seq2  T-AACTATTTATG-TGGGAG-AACTCTG--AATGTG-AAATGTAG-AAGC  688

seq1  TTTTCATGACACCTTTTTACTTGTTCACCCTCAAACGTTATAAGATGAAG  749
        ||||||||| |||||||||   |||||||| |||||| ||||||| ||
seq2  --TTCATGACA-CTTTTTACT--GTCACCCTC-AACGTT-TAAGATG-AG  730

seq1  ATAAGTTAGGAAGTCAGAA  768
      || ||| ||  ||||||||
seq2  AT-AGTAAG--AGTCAGAA  746