BAC Information

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BAC

Clone NameB6Ng01-059J17
Chromosome4 (Build37)
Map Location 29,858,360 - 29,859,388
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha7, LOC100040907, LOC100040811
Downstream geneLOC665185, LOC619906, LOC100040864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059J17.bB6Ng01-059J17.g
ACCDH880833DH880834
length1,2301,016
definitionDH880833|Mus musculus domesticus DNA, BAC clone: B6Ng01-059J17, 5' end.DH880834|Mus musculus domesticus DNA, BAC clone: B6Ng01-059J17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattgtttgttcaggtgtgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttaaatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggttccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tctatttagatttgaccttagtacaaggagatacgtatggattgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctccctggtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatacagtttttatcacaattgc
tctgtagtaaagctttagatcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcatttttttgctattccagatg
aatttgcaaatttctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgtttattcctgccaatccatgagcatgggagatcttttcatct
tctgagatcttctttaatttctttcttcagagacttgaagttttatcata
cagatctttcacttcctcagttagagtcacactgagaaattttatatatt
tgtgattattgagaaggtgttgtttcctatttcattttcagcctgtttat
atttgtgtagagaaagcattgactgtttgagttatttatatcaactaact
tcaccggagctgttatcagtaggagttcgggtgattaaagtcttaatata
catctatccactgcaaagggaattgacttctctttcaattatctctgatc
cgtttgttgcaggcctggccactcagaaggtgtaagatgtagtgcgacct
gtatcccgtaattgggagagtcttcgacct
gaattctttgttcagctctgagccccattttttataaatgtgggttggca
gacagagagaaagtatagaaaatcactttttggccatactttgaaaccaa
actaagtgattcatttttgggaccatatagtattagagaaagaaaatgca
gaacagttatcagagaccgagacagtcgagtagggatagaataagattga
ggaaaagtcgagttaatattatatgaatatgcttgaaatgacatattaat
gtgtgttaaacagctaacatgtttctggaggggaggggagtactatgttc
tatcaatctaaactggtgccatgacccgagatgctgaattcagaaataag
gggaagataattttataaacttggttaattgttctgtaaaggtgaggttg
gagcatatttgcactttttgcatatggctataactatctgtaaatctata
agaggtaaataaattttctgtatatttgtgtgtggaataggcaggagatt
atggatgtagggtgtatacatgcataccaacacacacacacacacacaca
cacacacacacacacacacacacatatatatatatatgtataatatgatt
taaacatataagattgcatatcatattgattaaaatgtgttaaaaatggg
aaaacataagccattaataaatatatttaaaaggtattacaactgaaagt
aaaaaagcaacagtaaaatgcttataattatatcaatatttagtgcactg
ttttttaattgtcttacgcacaacagagaaaacattgaccagcatatatt
cacatggtttgtacaaacataagagcttgtcagtggtatggcacactttt
tgccaaactaacagggtgtttagaacagtacttgcctggcctgatatttg
taatccataaaaatcccactgagtcttcttatagtgataattggctttat
gtcactagaaagttaaaccacagcagagcagtgctactcaaagttcctat
tcatgtcttgattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29858360_29859388
seq2: B6Ng01-059J17.g_70_1085 (reverse)

seq1  AACAATCAAAGAACATGAATAGGGAACTTTTGAGTAGCACTGCTCTGCTG  50
      |||||||||   ||||||||| ||||| ||||||||||||||||||||||
seq2  AACAATCAA--GACATGAATA-GGAAC-TTTGAGTAGCACTGCTCTGCTG  46

seq1  TGGTTATAACTATCTAGGTGACATAAAAAGCCAATTATCACTATAAAGAG  100
      ||||| ||||| |||| |||||||  |||||||||||||||||| |||| 
seq2  TGGTT-TAACTTTCTA-GTGACAT--AAAGCCAATTATCACTAT-AAGAA  91

seq1  AACTCAGTTGGGATTTTTATGGATTACAAATATCAGGCCAGGCAAGTACT  150
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAG-TGGGATTTTTATGGATTACAAATATCAGGCCAGGCAAGTACT  140

seq1  GTTCTAAACACCCTGTTAGTTTGGCAAAAAGTGTGCCATGACCACTGACA  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTCTAAACACCCTGTTAGTTTGGCAAAAAGTGTGCCAT-ACCACTGACA  189

seq1  AGCTCTTATGTTTGTAACAAACCATGTGAATATATGCTGGTCAATGTTTT  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCTCTTATGTTTGT-ACAAACCATGTGAATATATGCTGGTCAATGTTTT  238

seq1  CTCTGTTGTGCGTAAGACAATTTAAAAAACAGTGCACTAAATATTGATAT  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCTGTTGTGCGTAAGACAA-TTAAAAAACAGTGCACTAAATATTGATAT  287

seq1  AATTATAAGCATTTTACTGTTGCTTTTTTACTTTCAGTTGTAATACCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAGCATTTTACTGTTGCTTTTTTACTTTCAGTTGTAATACCTTT  337

seq1  TAAATATATTTATTAATGGCTTATGTTTTCCCATTTTTAACACATTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATTTATTAATGGCTTATGTTTTCCCATTTTTAACACATTTTAA  387

seq1  TCAATATGATATGCAATCTTATATGTTTAAATCATATTATACATATATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGATATGCAATCTTATATGTTTAAATCATATTATACATATATAT  437

seq1  ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  487

seq1  TGGTATGCATGTATACACCCTACATCCATAATCTCCTGCCTATTCCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGCATGTATACACCCTACATCCATAATCTCCTGCCTATTCCACAC  537

seq1  ACAAATATACAGAAAATTTATTTACCTCTTATAGATTTACAGATAGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATACAGAAAATTTATTTACCTCTTATAGATTTACAGATAGTTAT  587

seq1  AGCCATATGCAAAAAGTGCAAATATGCTCCAACCTCACCTTTACAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATGCAAAAAGTGCAAATATGCTCCAACCTCACCTTTACAGAACA  637

seq1  ATTAACCAAGTTTATAAAATTATCTTCCCCTTATTTCTGAATTCAGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCAAGTTTATAAAATTATCTTCCCCTTATTTCTGAATTCAGCATC  687

seq1  TCGGGTCATGGCACCAGTTTAGATTGATAGAACATAGTACTCCCCTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTCATGGCACCAGTTTAGATTGATAGAACATAGTACTCCCCTCCCC  737

seq1  TCCAGAAACATGTTAGCTGTTTAACACACATTAATATGTCATTTCAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAACATGTTAGCTGTTTAACACACATTAATATGTCATTTCAAGCA  787

seq1  TATTCATATAATATTAACTCGACTTTTCCTCAATCTTATTCTATCCCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATAATATTAACTCGACTTTTCCTCAATCTTATTCTATCCCTAC  837

seq1  TCGACTGTCTCGGTCTCTGATAACTGTTCTGCATTTTCTTTCTCTAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTGTCTCGGTCTCTGATAACTGTTCTGCATTTTCTTTCTCTAATAC  887

seq1  TATATGGTCCCAAAAATGAATCACTTAGTTTGGTTTCAAAGTATGGCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGTCCCAAAAATGAATCACTTAGTTTGGTTTCAAAGTATGGCCAA  937

seq1  AAAGTGATTTTCTATACTTTCTCTCTGTCTGCCAACCCACATTTATAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGATTTTCTATACTTTCTCTCTGTCTGCCAACCCACATTTATAAAA  987

seq1  AATGGGGCTCAGAGCTGAACAAAGAATTC  1029
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAGCTGAACAAAGAATTC  1016