BAC Information

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BAC

Clone NameB6Ng01-060A24
Chromosome4 (Build37)
Map Location 37,094,374 - 37,095,482
singlet/doubletsinglet
Overlap geneLOC545600
Upstream geneLOC100042132
Downstream geneLOC621458, LOC277771
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060A24.bB6Ng01-060A24.g
ACCDH881155DH881156
length1,0961,173
definitionDH881155|Mus musculus domesticus DNA, BAC clone: B6Ng01-060A24, 5' end.DH881156|Mus musculus domesticus DNA, BAC clone: B6Ng01-060A24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtttgtgtaaattgtatgtttttgccttttttgtccttttcc
ttgttccctagttttcttttttgtacaaaggaaaatgtgttgaatcacac
acagaagtgtggatccatgttttaggatgtaagcgattctttcaatcatt
agacacataaaattaattgaaaatggtatattcactagggaaagaaaatt
ttttacaattgataataagtctaacaggttgaataagtgatggagggatt
taaatagtaaccaggtcatgtggtctcaagactgcattttaaatttggct
tttaaaaattaatagctttctaaaattttgtgtttatgtgtatcatgtat
tgactgcatatatatttgtgacacatgtgcattcagtaccctcaaagacc
aaaagagggtattagatcccttgtaactggagttaaaaactgctatgtgg
gtttgctttttgttttctgtttgtttgtttcttgtttgtttgttttgttt
gagggctggaatttgaatacaggtcttctggaagagcagccaggagtctt
aatatttgagccatctctccaaccctgtctttgataacctgcttccttca
gtatatgtttgaacttccttcatatatatgatgtggtgcctctaaatgtc
atattctacacaaatctttgaagaatattagatgaatattctctcattta
acattttacatataaagaaatataccccagaagtatctacaagaccatgt
cgtgttctataattcaataactataataaacaaattacaagcactacatt
cctgggttatgtgattctctttataaaagaaaacacggatttagaatatt
ttaatattcaaacagcactgaaattttcttgaacacagaatagtacttaa
ttgtatttgctgctgtattgatgatacagaggaaactacagaatattaat
aaatatctaaggatttgtagattttttcattcacgtaaaattatagtttc
catagaggacatacatgctgggaaacatatagttgcttaaaagggtaaag
tcagaattatgtaaatattccttatttatcattcatgcattgctgg
gaattcctagaagaaggagaaaaaacgaaaataagctatttcagagccct
cctagggacagacagaaaatgggagacgtcctgcttcctctctggctcct
atgaaaatatttttagcttcgaataggatatctgtgttctattgtctgtt
ttttggtgcaccaaattgtctatatgtctgttaattcatgtttgtttttg
tttggatggttgaatgattgttgttctgtgtttcatgttgaaaaatataa
aaagcagtctcagtctgcacagcaaaagttgacaagttagctgcatggtg
gctgggagacaagtacagctgaaaaagccctgctcagggtcgattgcaaa
tggagcttttaaaggggcaggcagccttttgcttgtaacagaaagttagc
ttaaagttggaaacccaaggttggagttattctaaacaacataagaaaac
aggtaatatgcaaaagcagtgtacaaagggtagaaagggtatgtttgaaa
ataaagtacatatctttacaaatagaaggaaaaccctttcaaggtataat
ggatataggagcagataaaagcattatatctagtaagtggtggcccgctt
cttggcctgttaatcaatcgtcacatagcttacaaggattaggatatgag
gctaccccaactataagtgcaaaatccttacaatggcaagataaagaagg
aaggacaggactttttcagccttatgtactccctttacctgtaaacgtat
ggggaagagatgtgttgtcagccatgaactttatactaactaatgactat
tctcaaaaaagcaaggaaatgatgaaaggaatggaatatatacctggact
atgttttggaaaaattttacaagatagaatttcaccagttaaagccacag
aaatcagacagaaagggctggggttttctaggggccactgaggagtcttg
cctattcatgtgtatgagacacgtgtgggtgcctcaatgacttatctctc
tgagagtcaagcactggagaatagtatagacatagacctggacatgtgga
ccatcattcctgaatatctccatttgttgaaggaaagtcgttaatggatg
ttctgaccagaccctatatgccattgcatgacatttcaagaagtctcgta
tctcgctatcgatgagatgcgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37094374_37095482
seq2: B6Ng01-060A24.b_31_1126

seq1  GAATTCCTGTTTGTGTAAATTGTATGTTTTTGCCTTTTTTGTCCTTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTGTGTAAATTGTATGTTTTTGCCTTTTTTGTCCTTTTCC  50

seq1  TTGTTCCCTAGTTTTCTTTTTTGTACAAAGGAAAATGTGTTGAATCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCCTAGTTTTCTTTTTTGTACAAAGGAAAATGTGTTGAATCACAC  100

seq1  ACAGAAGTGTGGATCCATGTTTTAGGATGTAAGCGATTCTTTCAATCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTGTGGATCCATGTTTTAGGATGTAAGCGATTCTTTCAATCATT  150

seq1  AGACACATAAAATTAATTGAAAATGGTATATTCACTAGGGAAAGAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATAAAATTAATTGAAAATGGTATATTCACTAGGGAAAGAAAATT  200

seq1  TTTTACAATTGATAATAAGTCTAACAGGTTGAATAAGTGATGGAGGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAATTGATAATAAGTCTAACAGGTTGAATAAGTGATGGAGGGATT  250

seq1  TAAATAGTAACCAGGTCATGTGGTCTCAAGACTGCATTTTAAATTTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTAACCAGGTCATGTGGTCTCAAGACTGCATTTTAAATTTGGCT  300

seq1  TTTAAAAATTAATAGCTTTCTAAAATTTTGTGTTTATGTGTATCATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTAATAGCTTTCTAAAATTTTGTGTTTATGTGTATCATGTAT  350

seq1  TGACTGCATATATATTTGTGACACATGTGCATTCAGTACCCTCAAAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCATATATATTTGTGACACATGTGCATTCAGTACCCTCAAAGACC  400

seq1  AAAAGAGGGTATTAGATCCCTTGTAACTGGAGTTAAAAACTGCTATGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGGTATTAGATCCCTTGTAACTGGAGTTAAAAACTGCTATGTGG  450

seq1  GTTTGCTTTTTGTTTTCTGTTTGTTTGTTTCTTGTTTGTTTGTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTTTTGTTTTCTGTTTGTTTGTTTCTTGTTTGTTTGTTTTGTTT  500

seq1  GAGGGCTGGAATTTGAATACAGGTCTTCTGGAAGAGCAGCCAGGAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTGGAATTTGAATACAGGTCTTCTGGAAGAGCAGCCAGGAGTCTT  550

seq1  AATATTTGAGCCATCTCTCCAACCCTGTCTTTGATAACCTGCTTCCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGAGCCATCTCTCCAACCCTGTCTTTGATAACCTGCTTCCTTCA  600

seq1  GTATATGTTTGAACTTCCTTCATATATATGATGTGGTGCCTCTAAATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTTTGAACTTCCTTCATATATATGATGTGGTGCCTCTAAATGTC  650

seq1  ATATTCTACACAAATCTTTGAAGAATATTAGATGAATATTCTCTCATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTACACAAATCTTTGAAGAATATTAGATGAATATTCTCTCATTTA  700

seq1  ACATTTTACATATAAAGAAATATACCCCAGAAGTATCTACAAGACCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTACATATAAAGAAATATACCCCAGAAGTATCTACAAGACCATGT  750

seq1  CGTGTTCTATAATTCAATAACTATAATAAACAAATTACAAGCACTACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCTATAATTCAATAACTATAATAAACAAATTACAAGCACTACATT  800

seq1  CCTGGGTTATGTGATTCTCTTTATAAAAGAAAACACGGATTTAGAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTTATGTGATTCTCTTTATAAAAGAAAACACGGATTTAGAATATT  850

seq1  TTAATATTCAAACAGCACTGAAATTTTCTTGAACACAGAATAGTACTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTCAAACAGCACTGAAATTTTCTTGAACACAGAATAGTACTTAA  900

seq1  TTGTATTTGCTGCTGTTATTTGATGATACAGAGGAAAACTACAGAATATT  950
      ||||||||||||||||   ||||||||||||||| |||||||||||||||
seq2  TTGTATTTGCTGCTGT--ATTGATGATACAGAGG-AAACTACAGAATATT  947

seq1  AATAAATATCTAAGGATTTGTAAGATTTTTTTCATTCACGTAAAATTATA  1000
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  AATAAATATCTAAGGATTTGT-AGA-TTTTTTCATTCACGTAAAATTATA  995

seq1  GTTTTCCATAGAGACAATACATGCTGGAAAACATATTAGTTGCTTAAAAG  1050
      | |||||||||||   ||||||||||| ||||||| ||||||||||||||
seq2  G-TTTCCATAGAGGACATACATGCTGGGAAACATA-TAGTTGCTTAAAAG  1043

seq1  GGTAAAAGTCAGATTTATGTTAAAATATTCCTTTATTTTATCAATCCATG  1100
      ||| ||||||||| ||||||  |||||||||||   |||||| || ||||
seq2  GGT-AAAGTCAGAATTATGT--AAATATTCCTT--ATTTATC-ATTCATG  1087

seq1  CATTGCTGG  1109
      |||||||||
seq2  CATTGCTGG  1096