BAC Information

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BAC

Clone NameB6Ng01-061F18
Chromosome4 (Build37)
Map Location 70,671,473 - 70,672,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979, LOC667638, EG667649
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061F18.bB6Ng01-061F18.g
ACCDH882061DH882062
length3511,087
definitionDH882061|Mus musculus domesticus DNA, BAC clone: B6Ng01-061F18, 5' end.DH882062|Mus musculus domesticus DNA, BAC clone: B6Ng01-061F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgtcagaaagacctcacaagagacatttctttgtagaagagtcaactat
cattgcagaaatttacaagtgataaacatgtagaaaataaatgaaagagg
agtataagtccagaaatgggacattgatatcactcacagacacatacaga
aagaagggagcaggggaatgatgtgtgggagaaagagatagataaataaa
agatggagagagagagagagagagagagagagagagagagagagagagag
agagagagagagagagagagaaccctaaggtttggggactatgtcagaag
agaaatgcaaaggctcggggccaggggccaggaagaatggataaaaacag
t

gaattctttcctattgggaagcccttaagtctaattagacagataaggat
tatccaaatgataaagctgtcaatttttcactcctgtaaataactttcta
gactggtcattgttttctatgcataggaatcatgtgagaggatgttagga
agatagtggataactttcacagttacctaaaggagaatagatacacacac
acacacacacacacacacacacacacacacaggctttctaggacttagac
tgttgtaatttgatgggaatccagtgaaaatctttgagcaaaataatgat
gtaatgaagtaagaatgaaaaggattcactagcattctatgttgtgaata
cattgttgaaagagaaagaagaaagatgcaaggaaatgaataagattagt
attattttaataaaatgaactatgatttaatattagacaatgagaactga
aggaaaaatggtagattcgcgaactagtagagtgtgttcatggaaaaaga
tcagaactgaattctggagcttgtaaagtctgaaatgtacattagacatt
caagtcaactgtcatgtaagtactttgctgcatgattgtagactcaaaga
acgtctgggctacacaattaaatccagtaatgtttcagcaagaaaatcat
atttaaatacagaaaatggtgagatgactgcagggtagtgagaggaacag
gactaaatcctgtaataatagacagtgcgaaattgccagtcaaaatagag
aaaaggcaggagcaggtaaagtgtgattattgttcatctgttccaaactc
ctgagaagtagtaggataatcttaggaattttttaagtgatagaaaggaa
gaagaagaacctttgcatggtaactctgtacactgtttgtgccccaagat
gagtcaagatgggaatgggctaccccagaaacatcagaaggaggagcatg
gattgagaaatttgagtcatgtgatgccagttgacactggtgaggccata
aggctaaaacctcagcaccagtaatttatcattttgtatatgtgagaaag
gctccacaaatttgatgttaatgaattttccctcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70671473_70672572
seq2: B6Ng01-061F18.g_68_1154 (reverse)

seq1  CAAGAGGGAAAATTTCATTAACATCCAAAATTTTTGTGGAGCCTTTCTCA  50
      |||||||||||| |||||||||||| ||    ||||||||||||||||||
seq2  CAAGAGGGAAAA-TTCATTAACATCAAA----TTTGTGGAGCCTTTCTCA  45

seq1  CATATACAGAATTGATTAAATTACTGGTTGCTGAGGTTTTTAGCCCTTAT  100
      |||||||| || ||| ||||||||||| |||||||| |||||| ||||||
seq2  CATATACA-AAATGA-TAAATTACTGG-TGCTGAGG-TTTTAG-CCTTAT  90

seq1  GCCCTCACCAGTGGTCAACTTGGCATCACATGACTCAAATTTCCTCAATC  150
      | |||||||||| |||||| |||||||||||||||||||||| |||||||
seq2  GGCCTCACCAGT-GTCAAC-TGGCATCACATGACTCAAATTT-CTCAATC  137

seq1  CATTGCTCCTCCTTCTGATGTTTCTGGGGTAGCCCATTCCCATCTTGACT  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-TGCTCCTCCTTCTGATGTTTCTGGGGTAGCCCATTCCCATCTTGACT  186

seq1  CATCTTGGGGCACAAACAGTGTACAGAGTTACCATGCAAAGGTTCTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGGGCACAAACAGTGTACAGAGTTACCATGCAAAGGTTCTTCTT  236

seq1  CTTCC-TTCTATCACTTAAAAAATTCCTAAGATTATCCTACTACTTCTCA  299
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTCTATCACTTAAAAAATTCCTAAGATTATCCTACTACTTCTCA  286

seq1  GGAGTTTGGAACAGATGAACAATAATCACACTTTACCTGCTCCTGCCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGGAACAGATGAACAATAATCACACTTTACCTGCTCCTGCCTTT  336

seq1  TCTCTATTTTGACTGGCAATTTCGCACTGTCTATTATTACAGGATTTAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTTTGACTGGCAATTTCGCACTGTCTATTATTACAGGATTTAGT  386

seq1  CCTGTTCCTCTCACTACCCTGCAGTCATCTCACCATTTTCTGTATTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCTCTCACTACCCTGCAGTCATCTCACCATTTTCTGTATTTAAA  436

seq1  TATGATTTTCTTGCTGAAACATTACTGGATTTAATTGTGTAGCCCAGACG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTTCTTGCTGAAACATTACTGGATTTAATTGTGTAGCCCAGACG  486

seq1  TTCTTTGAGTCTACAATCATGCAGCAAAGTACTTACATGACAGTTGACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGTCTACAATCATGCAGCAAAGTACTTACATGACAGTTGACTT  536

seq1  GAATGTCTAATGTACATTTCAGACTTTACAAGCTCCAGAATTCAGTTCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCTAATGTACATTTCAGACTTTACAAGCTCCAGAATTCAGTTCTG  586

seq1  ATCTTTTTCCATGAACACACTCTACTAGTTCGCGAATCTACCATTTTTCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCCATGAACACACTCTACTAGTTCGCGAATCTACCATTTTTCC  636

seq1  TTCAGTTCTCATTGTCTAATATTAAATCATAGTTCATTTTATTAAAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCTCATTGTCTAATATTAAATCATAGTTCATTTTATTAAAATAA  686

seq1  TACTAATCTTATTCATTTCCTTGCATCTTTCTTCTTTCTCTTTCAACAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATCTTATTCATTTCCTTGCATCTTTCTTCTTTCTCTTTCAACAAT  736

seq1  GTATTCACAACATAGAATGCTAGTGAATCCTTTTCATTCTTACTTCATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCACAACATAGAATGCTAGTGAATCCTTTTCATTCTTACTTCATTA  786

seq1  CATCATTATTTTGCTCAAAGATTTTCACTGGATTCCCATCAAATTACAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTATTTTGCTCAAAGATTTTCACTGGATTCCCATCAAATTACAAC  836

seq1  AGTCTAAGTCCTAGAAAGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAGTCCTAGAAAGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  886

seq1  TGTGTGTGTATCTATTCTCCTTTAGGTAACTGTGAAAGTTATCCACTATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTATCTATTCTCCTTTAGGTAACTGTGAAAGTTATCCACTATC  936

seq1  TTCCTAACATCCTCTCACATGATTCCTATGCATAGAAAACAATGACCAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACATCCTCTCACATGATTCCTATGCATAGAAAACAATGACCAGT  986

seq1  CTAGAAAGTTATTTACAGGAGTGAAAAATTGACAGCTTTATCATTTGGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAGTTATTTACAGGAGTGAAAAATTGACAGCTTTATCATTTGGAT  1036

seq1  AATCCTTATCTGTCTAATTAGACTTAAGGGCTTCCCAATAGGAAAGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTATCTGTCTAATTAGACTTAAGGGCTTCCCAATAGGAAAGAATT  1086

seq1  C  1100
      |
seq2  C  1087


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