BAC Information

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BAC

Clone NameB6Ng01-063B07
Chromosome4 (Build37)
Map Location 75,651,018 - 75,806,081
singlet/doubletdoublet
Overlap genePtprd
Upstream geneLOC636847, 3110001D03Rik, LOC623529, LOC100039833, LOC100039884, LOC667845
Downstream geneLOC667858, LOC667862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063B07.bB6Ng01-063B07.g
ACCDH883285DH883286
length1,1801,205
definitionDH883285|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B07, 5' end.DH883286|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,651,018 - 75,652,231)(75,804,844 - 75,806,081)
sequence
gaattctcattaattttgcaaagttcacaatttgttttcagaagcattct
ttgctgggtggccactgtgtcaccttagagctgatgggagaatgaatcac
atgcacaaggcctggaaagcagggtctcttcctcacggtgctctttgctc
tgttgtctgaccttctgcgctttgtacgagagctttgcaactggccccag
aaagggagctagccagtctgtctgagttcaagtacacagcagcaagagta
accacaggctgagaggaaactcagtctcttggctagaagaaacttattta
ttgttagtgagcacttttcccaggaggggaagagcagctcttgggtcaca
tagcttggcagctatgacttaggttcataaggaagcaattattgaaaagt
ttcatctagtaatgagataatcagaacctagtgtggttagcctgtaggag
ccacatgatttaaaaaaaaaatcactcagatcatcaatttccatcgataa
tatatgaacattattgttatgacaccatcaagccaacactgtttatgagt
ccagtgaaagaaatgcacgtgcaatttctaaaatgccacatggatattat
aatcaagggcaataagtaaatgaaataaacctatctccttttatctactg
ataaaaagtaattctgactctggatcctcctttcaaactctgtactaaaa
ataattaatagagaaataaaattctttttagtgacagcagaaatatgtgt
accatgcctaaattctaatatcagaaacatcacaggagacacgcctccct
atctcctcggaataatgaggtgtggatttattaacatagtgtgcctcagt
atacagtaaaataacaaacatcacataatgaaataagatactgcagacag
agagcaaactcatttccagggctttctgactcaatattggcttactcagt
aaagcgctatacaaagcaagccaatatcactagcacatcacttaaagata
catcttctcttctctgtgttgcagctaaatagaaagtgggtaacagcaca
tctctacacagtgtcagccatgcaggaaatgccatcaacagcttatagat
gatttaataagtcagagttggaatgctgtagttctaagctgaattccacc
tgctctctggacaaataagcatagtttctt
gaattccatgataatttccataatagctaaaatagtttacattcaaaacg
tggcgggattcttgacagaaattgtgttgaacactatgtgtatttctagt
catgcgtctcagtgtgtaggggataccttgtttctcaatatgtctagtca
actcatgtttgtaggacttacagtatttgagaaataagatgtgcatatgt
gatgggaaatatagtgtgagcctcataaatatgatatatttacatataat
ggggttttattatgtaacacagcctgacctgaaactcttgattcccctgc
ctcagcttccaaacagtctcagtgtatttatttaaagaaatgcacaccaa
tgcctggatcagagtgtattttaaaaggtattcctcacataattcaatag
agttacaattctagcagtaacagtaatttaaatatcaactgtttctgtca
cttttcactaattcactttagaatatcacatgtgcaatgttagaaatcta
atatccatgaaaaatgtccatactaatctcagtcctgatgattcataatg
caatataggcatataattttcagtgcctaagtcacatgcaagcctacaga
acaagaattatgttttaaatgaacatttgattgtaaacaccagatagatg
atagatgatagatagatagatagatagatagatagataggcagacaatat
tagcaggcacagaggatgggcccttcactatcaaattcttggagataaat
gaaaattgggcaggccttttgtttgttccttttatcttgtgatgagctcc
tgttgggctttgcttttagcatggttcatctcaagctggcagtgctcttt
gggttagtattatgctctcctcctgactttaatctcctctttgaagcctc
acctcagttagtgagaatgaagacctgagtgtaatcccctagatgaaagt
ttggggaatggttgcttctctgtgtagtgcacagcttgagcaagagttac
aatagcatctttctttttgaaagatgaaaaaagtctcaatatcctatatt
agaaagtttttgctagctgtcttaacgcttattttatgctacatttaatc
tgttccttggactgctgttccatatatgttactctacttcctggaagcat
ggactgtttttccggatgcattgctcgaaggaaattcacacggtttgtct
acttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75651018_75652231
seq2: B6Ng01-063B07.b_45_1224

seq1  GAATTCTCATTAATTTTGCAAAGTTCACAATTTGTTTTCAGAAGCATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTAATTTTGCAAAGTTCACAATTTGTTTTCAGAAGCATTCT  50

seq1  TTGCTGGGTGGCCACTGTGTCACCTTAGAGCTGATGGGAGAATGAATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGTGGCCACTGTGTCACCTTAGAGCTGATGGGAGAATGAATCAC  100

seq1  ATGCACAAGGCCTGGAAAGCAGGGTCTCTTCCTCACGGTGCTCTTTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAAGGCCTGGAAAGCAGGGTCTCTTCCTCACGGTGCTCTTTGCTC  150

seq1  TGTTGTCTGACCTTCTGCGCTTTGTACGAGAGCTTTGCAACTGGCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCTGACCTTCTGCGCTTTGTACGAGAGCTTTGCAACTGGCCCCAG  200

seq1  AAAGGGAGCTAGCCAGTCTGTCTGAGTTCAAGTACACAGCAGCAAGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGCTAGCCAGTCTGTCTGAGTTCAAGTACACAGCAGCAAGAGTA  250

seq1  ACCACAGGCTGAGAGGAAACTCAGTCTCTTGGCTAGAAGAAACTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGCTGAGAGGAAACTCAGTCTCTTGGCTAGAAGAAACTTATTTA  300

seq1  TTGTTAGTGAGCACTTTTCCCAGGAGGGGAAGAGCAGCTCTTGGGTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTGAGCACTTTTCCCAGGAGGGGAAGAGCAGCTCTTGGGTCACA  350

seq1  TAGCTTGGCAGCTATGACTTAGGTTCATAAGGAAGCAATTATTGAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGGCAGCTATGACTTAGGTTCATAAGGAAGCAATTATTGAAAAGT  400

seq1  TTCATCTAGTAATGAGATAATCAGAACCTAGTGTGGTTAGCCTGTAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAGTAATGAGATAATCAGAACCTAGTGTGGTTAGCCTGTAGGAG  450

seq1  CCACATGATTTAAAAAAAAAATCACTCAGATCATCAATTTCCATCGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGATTTAAAAAAAAAATCACTCAGATCATCAATTTCCATCGATAA  500

seq1  TATATGAACATTATTGTTATGACACCATCAAGCCAACACTGTTTATGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAACATTATTGTTATGACACCATCAAGCCAACACTGTTTATGAGT  550

seq1  CCAGTGAAAGAAATGCACGTGCAATTTCTAAAATGCCACATGGATATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAAAGAAATGCACGTGCAATTTCTAAAATGCCACATGGATATTAT  600

seq1  AATCAAGGGCAATAAGTAAATGAAATAAACCTATCTCCTTTTATCTACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGGGCAATAAGTAAATGAAATAAACCTATCTCCTTTTATCTACTG  650

seq1  ATAAAAAGTAATTCTGACTCTGGATCCTCCTTTCAAACTCTGTACTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGTAATTCTGACTCTGGATCCTCCTTTCAAACTCTGTACTAAAA  700

seq1  ATAATTAATAGAGAAATAAAATTCTTTTTAGTGACAGCAGAAATATGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAATAGAGAAATAAAATTCTTTTTAGTGACAGCAGAAATATGTGT  750

seq1  ACCATGCCTAAATTCTAATATCAGAAACATCACAGGAGACACGCCTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCCTAAATTCTAATATCAGAAACATCACAGGAGACACGCCTCCCT  800

seq1  ATCTCCTCGGAATAATGAGGTGTGGATTTATTAACATAGTGTGCCTCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCGGAATAATGAGGTGTGGATTTATTAACATAGTGTGCCTCAGT  850

seq1  ATACAGTAAAATAACAAACATCACATAATGAAATAAGATACTGCAGACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTAAAATAACAAACATCACATAATGAAATAAGATACTGCAGACAG  900

seq1  AGAGCAAACTCATTTCCAGGGCTTTCTGACTCAATATTGGCTTACTCAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAACTCATTTCCAGGGCTTTCTGACTCAATATTGGCTTACTCAGT  950

seq1  AAAGCGCTATACAAAGCAAGCCAATATCACTAGCAACCATCACTTAAAAG  1000
      |||||||||||||||||||||||||||||||||||  |||||||| ||||
seq2  AAAGCGCTATACAAAGCAAGCCAATATCACTAGCA--CATCACTT-AAAG  997

seq1  ATACATCTTCTCTTCTCTGTGTTGCCAGCTAAAATAGAAAGTGGGTAACA  1050
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  ATACATCTTCTCTTCTCTGTGTTG-CAGCT-AAATAGAAAGTGGGTAACA  1045

seq1  GCACATCTCTACACCAGTGGTTCAGCCCATGCAGGGAAAATGCCATCCAA  1100
      ||||||||||||| |||||  |||| |||||||||  ||||||||||  |
seq2  GCACATCTCTACA-CAGTG--TCAG-CCATGCAGG--AAATGCCATC--A  1087

seq1  ACAGCTGTAATTAGATGGATTTTAATAAGTCAGAAGTTGGGAAATTGCTG  1150
      |||||| ||  ||||||   ||||||||||||| ||||||   | |||||
seq2  ACAGCT-TA--TAGATG--ATTTAATAAGTCAG-AGTTGG---AATGCTG  1128

seq1  TAGGTTTCTAAGGCTGAAAATCCCACCTTGCCTGCTCCTTGGGACAAATT  1200
      |||  |||||| ||||  ||| |||     |||||| ||  ||||||| |
seq2  TAG--TTCTAA-GCTG--AATTCCA-----CCTGCT-CTCTGGACAAA-T  1166

seq1  AAGCTATGTTTCTT  1214
      ||||   |||||||
seq2  AAGCATAGTTTCTT  1180

seq1: chr4_75804844_75806081
seq2: B6Ng01-063B07.g_66_1270 (reverse)

seq1  AAAGTAGACAAAAACTTGTGTGGATATTTACTTTTTGTAAGCAATGCATC  50
      ||||||||||||     |||||   |||| |||      |||||||||||
seq2  AAAGTAGACAAA---CCGTGTG--AATTTCCTT----CGAGCAATGCATC  41

seq1  TGAGAAAAACAGTGCATGCTCCAAGGGAAGATAGAGTTAAACA-ATAAGT  99
       | |||||||||| |||||| | | ||||| ||||||  |||| |||   
seq2  CG-GAAAAACAGTCCATGCTTCCA-GGAAG-TAGAGT--AACATATA---  83

seq1  GGGAAAAGCAAGTCCCAAGTGAAACAGATTAAATAGATAGCATTAAAAAT  149
       |||| ||| ||||| |   | ||||||||||||   ||||||  |||||
seq2  TGGAACAGC-AGTCCAA---GGAACAGATTAAAT--GTAGCAT--AAAAT  125

seq1  AAGGCTGTTAAGACAGCTAGACAAAAAC-TTCTAATATTAGGATATTGAG  198
      |||   |||||||||||||| ||||||| |||||||| ||||||||||||
seq2  AAG--CGTTAAGACAGCTAG-CAAAAACTTTCTAATA-TAGGATATTGAG  171

seq1  ACTTTTTTTCATCTTTCAAAAAGAAAGATGCTATTGTTAACTCTTGCTTC  248
      || ||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  AC-TTTTTTCATCTTTCAAAAAGAAAGATGCTATTG-TAACTCTTGC-TC  218

seq1  AAGCTGTGCACTAACACAGAGAAGCAACCATTCCCCAAACTTTCATCTAG  298
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGCACT-ACACAGAGAAGCAACCATTCCCCAAACTTTCATCTAG  267

seq1  GGGATTTACACTCAGGTCTTCATTCTCACTAACCTGAGGTGAGGCTTCAA  348
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGA-TTACACTCAGGTCTTCATTCTCACTAA-CTGAGGTGAGGCTTCAA  315

seq1  AGAGGAGATTAAAGTCAGGAGGAGAGCATAATACTAACCCAAAGAGCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATTAAAGTCAGGAGGAGAGCATAATACTAACCCAAAGAGCACT  365

seq1  GCCAGCTTGAGATGAACCATGCTAAAAGCAAAGCCCAACAGGAGCTCATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTTGAGATGAACCATGCTAAAAGCAAAGCCCAACAGGAGCTCATC  415

seq1  ACAAGATAAAAGGAACAAACAAAAGGCCTGCCCAATTTTCATTTATCTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATAAAAGGAACAAACAAAAGGCCTGCCCAATTTTCATTTATCTCC  465

seq1  AAGAATTTGATAGTGAAGGGCCCATCCTCTGTGCCTGCTAATATTGTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTGATAGTGAAGGGCCCATCCTCTGTGCCTGCTAATATTGTCTG  515

seq1  CCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCATCTATCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCATCTATCTG  565

seq1  GTGTTTACAATCAAATGTTCATTTAAAACATAATTCTTGTTCTGTAGGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTACAATCAAATGTTCATTTAAAACATAATTCTTGTTCTGTAGGCT  615

seq1  TGCATGTGACTTAGGCACTGAAAATTATATGCCTATATTGCATTATGAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGACTTAGGCACTGAAAATTATATGCCTATATTGCATTATGAAT  665

seq1  CATCAGGACTGAGATTAGTATGGACATTTTTCATGGATATTAGATTTCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGACTGAGATTAGTATGGACATTTTTCATGGATATTAGATTTCTA  715

seq1  ACATTGCACATGTGATATTCTAAAGTGAATTAGTGAAAAGTGACAGAAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCACATGTGATATTCTAAAGTGAATTAGTGAAAAGTGACAGAAAC  765

seq1  AGTTGATATTTAAATTACTGTTACTGCTAGAATTGTAACTCTATTGAATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATATTTAAATTACTGTTACTGCTAGAATTGTAACTCTATTGAATT  815

seq1  ATGTGAGGAATACCTTTTAAAATACACTCTGATCCAGGCATTGGTGTGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGAATACCTTTTAAAATACACTCTGATCCAGGCATTGGTGTGCA  865

seq1  TTTCTTTAAATAAATACACTGAGACTGTTTGGAAGCTGAGGCAGGGGAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAATAAATACACTGAGACTGTTTGGAAGCTGAGGCAGGGGAAT  915

seq1  CAAGAGTTTCAGGTCAGGCTGTGTTACATAATAAAACCCCATTATATGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTTCAGGTCAGGCTGTGTTACATAATAAAACCCCATTATATGTA  965

seq1  AATATATCATATTTATGAGGCTCACACTATATTTCCCATCACATATGCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCATATTTATGAGGCTCACACTATATTTCCCATCACATATGCAC  1015

seq1  ATCTTATTTCTCAAATACTGTAAGTCCTACAAACATGAGTTGACTAGACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTTCTCAAATACTGTAAGTCCTACAAACATGAGTTGACTAGACA  1065

seq1  TATTGAGAAACAAGGTATCCCCTACACACTGAGACGCATGACTAGAAATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGAAACAAGGTATCCCCTACACACTGAGACGCATGACTAGAAATA  1115

seq1  CACATAGTGTTCAACACAATTTCTGTCAAGAATCCCGCCACGTTTTGAAT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGTGTTCAACACAATTTCTGTCAAGAATCCCGCCACGTTTTGAAT  1165

seq1  GTAAACTATTTTAGCTATTATGGAAATTATCATGGAATTC  1238
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTATTTTAGCTATTATGGAAATTATCATGGAATTC  1205