BAC Information

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BAC

Clone NameB6Ng01-063K20
Chromosome4 (Build37)
Map Location 145,205,441 - 145,206,550
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701
Downstream geneOTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063K20.bB6Ng01-063K20.g
ACCDH883697DH883698
length1,1621,104
definitionDH883697|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K20, 5' end.DH883698|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattaatccacctacttatttctttctataccagtaccatacaa
atttttattactatttttctgccatacatctttaagttacagaaattgat
agctccagatttttttttgttgttcaagaacattttatctatcctgtggt
ttttgttttgtttgctgttccatacaacgttgagaatatttctttcaaga
tctgtgaagatttgtgctaaatttttgataagaattgtactgaatgtcta
gattgctttttggtaagatggacatattcattatgttaatcctattgata
catggacaagggagatctttccatgttctgatatcttcctgattctttct
taagatactttaagttcttctcctacaggttttcacttgcttgtttagag
gtaactgaaggtattttcttttgtttgtggctaaagtggagggttctgtt
tccataacttctttttcaacccttttaatcaattgtgtgtaggagggcta
aggctttctttaagtcaattgtgtatgcagacactttactaaaatgttta
tcaactgtaattttctggtagaattttttggctcacttatctactgttgt
gtccagtcagcggatcacatgtctggattctagcctggaaaggcatcttg
gaaacctggaagagaagaagggctaggcagcgcgagagaaagatgcagct
aagacagtcatcctgatcaaagctcagttttagtatttcaacacgcagtt
atgaaggaggggaggggggcccgattcccgacaaataatcctggagtcca
gtagcagggtgaccacgtgtatggctccggaacagcaaagcggtgggctc
cagcaatgggcgtggcagaacgattgagcgggaagttcatcctgatgtaa
acagtggaacttggcaggaagtttcaagtggggaggggagctataatata
catatcatatcactgaattctcttttcaatgatcccttatctctaagctg
cttatgctgagctatattctagtactctactgagagatggacgggaggtg
gacagctttttctggtcctgattaatgcatgtctattcctctattagttg
aatttgagattagatgccaacttgccatattgttagatacctgcatctgt
ctccatcttcat
gaattcaaagaaggcagaaacaaacttaatgaaattccagagaattccta
caagtgggtaagagaataattatacatatgcaggatgtgaacatcttatc
cagagatataaaaatctaaggaatgctcactctgaaataaattctgtaag
cctggtggtaactcaatggccaatatgtgaagatacaccattcaaacaaa
caatcaaacaaacaaacaaacaaaaaatcagctcatcaatgaaaggtctt
tcatcctagctgtcagggatgtgacctaaaagccattctggtctctatat
caggacatgtgaaagttagaaatagagtgtgggaccctgttttacaaaca
aacaaacacacaaacaaacaaacaggaaacccatacaaaaaaattagagc
tttgtcttctacattgatatcaaaatcaatttaaaaagtacaaggatatt
agaaggctgattctcctattggataatacttttatcttttaaagttgggt
cctcagtgggtcacaatcgtttgaggaatttagctgttggaacattactg
aataaagtatgacactgggggttgactatgagaaaaaaggatagatagat
ccaagccatcttaattctttcttcctctttagtgactggggttgaagatg
tgatctttcacctttctacttcaacaacatggcaatgttctatcagtcct
ccctgtcatggttgatggctatcctctggaagcattacccaaagtagtct
ttttcttctattagtttccttgaacatggtgctttatgaaagcagcagaa
aaaaaaccaattacagtaaaacatattctgattgggatttaaggctgcct
ttcagagagagaattcatgtcatattctgaatcctaatcaagaacaagaa
gtatgtaggtcatgggaactatgagccgtttaagaaatggtatcatctaa
atatcatagtcataatgtgttgtcttctctcagtaaaggtagatgagtaa
tggactcagaccccacagcatatttagacatgtatgtaaatatatggagg
tccacactccagggaatatacgtttatgaacatttttgtataaaaagaac
aatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145205441_145206550
seq2: B6Ng01-063K20.g_67_1170 (reverse)

seq1  AATTGTTCTTTTTATCAAAAAATGTTCATAAACGTATATT-CCTGGA-TG  48
      |||||||||||||||  ||||||||||||||||||||||| |||||| ||
seq2  AATTGTTCTTTTTATACAAAAATGTTCATAAACGTATATTCCCTGGAGTG  50

seq1  TAGACCT-CATATATATACATTACAATGTCTAAATTATGCTGT-GAGTCT  96
      | ||||| ||||||| |||| ||| ||||||||| |||||||| | ||||
seq2  TGGACCTCCATATATTTACA-TAC-ATGTCTAAA-TATGCTGTGGGGTCT  97

seq1  GAGTCCATTAACTCATCTACCTTTTACTGAGAGAAGACAACACAATTATG  146
      ||||||||| ||||||||||| ||||||||||||||||||||| ||||||
seq2  GAGTCCATT-ACTCATCTACC-TTTACTGAGAGAAGACAACAC-ATTATG  144

seq1  ACTATGATAATTTTAGATGATACCATTTCTTAAAACGGCCTCATAGTTCC  196
      |||||||||  |||||||||||||||||||| |||||| |||||||||||
seq2  ACTATGATA--TTTAGATGATACCATTTCTT-AAACGG-CTCATAGTTCC  190

seq1  CATGACCTAACATACTTCCTGTTCTTGATTAGGATTCAGAATATGACATG  246
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  CATGACCT-ACATACTTCTTGTTCTTGATTAGGATTCAGAATATGACATG  239

seq1  AATTCTCTCTCTGAAAGGCAGCCTTAAAT-CCAATCAGAATATGTTTTAC  295
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATTCTCTCTCTGAAAGGCAGCCTTAAATCCCAATCAGAATATGTTTTAC  289

seq1  TGTAATTGGTTTTTTTTCTGCTGCTTTCATAAAGCACCATGTTCAAGGAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTGGTTTTTTTTCTGCTGCTTTCATAAAGCACCATGTTCAAGGAA  339

seq1  ACTAATAGAAGAAAAAGACTACTTTGGGTAATGCTTCCAGAGGATAGCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAGAAGAAAAAGACTACTTTGGGTAATGCTTCCAGAGGATAGCCA  389

seq1  TCAACCATGACAGGGAGGACTGATAGAACATTGCCATGTTGTTGAAGTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCATGACAGGGAGGACTGATAGAACATTGCCATGTTGTTGAAGTAG  439

seq1  AAAGGTGAAAGATCACATCTTCAACCCCAGTCACTAAAGAGGAAGAAAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGAAAGATCACATCTTCAACCCCAGTCACTAAAGAGGAAGAAAGA  489

seq1  ATTAAGATGGCTTGGATCTATCTATCCTTTTTTCTCATAGTCAACCCCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATGGCTTGGATCTATCTATCCTTTTTTCTCATAGTCAACCCCCA  539

seq1  GTGTCATACTTTATTCAGTAATGTTCCAACAGCTAAATTCCTCAAACGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATACTTTATTCAGTAATGTTCCAACAGCTAAATTCCTCAAACGAT  589

seq1  TGTGACCCACTGAGGACCCAACTTTAAAAGATAAAAGTATTATCCAATAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCCACTGAGGACCCAACTTTAAAAGATAAAAGTATTATCCAATAG  639

seq1  GAGAATCAGCCTTCTAATATCCTTGTACTTTTTAAATTGATTTTGATATC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAGCCTTCTAATATCCTTGTACTTTTTAAATTGATTTTGATATC  689

seq1  AATGTAGAAGACAAAGCTCTAATTTTTTTGTATGGGTTTCCTGTTTGTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGAAGACAAAGCTCTAATTTTTTTGTATGGGTTTCCTGTTTGTTT  739

seq1  GTTTGTGTGTTTGTTTGTTTGTAAAACAGGGTCCCACACTCTATTTCTAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTGTTTGTTTGTTTGTAAAACAGGGTCCCACACTCTATTTCTAA  789

seq1  CTTTCACATGTCCTGATATAGAGACCAGAATGGCTTTTAGGTCACATCCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACATGTCCTGATATAGAGACCAGAATGGCTTTTAGGTCACATCCC  839

seq1  TGACAGCTAGGATGAAAGACCTTTCATTGATGAGCTGATTTTTTGTTTGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCTAGGATGAAAGACCTTTCATTGATGAGCTGATTTTTTGTTTGT  889

seq1  TTGTTTGTTTGATTGTTTGTTTGAATGGTGTATCTTCACATATTGGCCAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGATTGTTTGTTTGAATGGTGTATCTTCACATATTGGCCAT  939

seq1  TGAGTTACCACCAGGCTTACAGAATTTATTTCAGAGTGAGCATTCCTTAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACCACCAGGCTTACAGAATTTATTTCAGAGTGAGCATTCCTTAG  989

seq1  ATTTTTATATCTCTGGATAAGATGTTCACATCCTGCATATGTATAATTAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATATCTCTGGATAAGATGTTCACATCCTGCATATGTATAATTAT  1039

seq1  TCTCTTACCCACTTGTAGGAATTCTCTGGAATTTCATTAAGTTTGTTTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACCCACTTGTAGGAATTCTCTGGAATTTCATTAAGTTTGTTTCT  1089

seq1  GCCTTCTTTGAATTC  1110
      |||||||||||||||
seq2  GCCTTCTTTGAATTC  1104