BAC Information

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BAC

Clone NameB6Ng01-063M18
Chromosome4 (Build37)
Map Location 14,271,065 - 14,272,152
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039988, Runx1t1, LOC625831, LOC433687, LOC100040030
Downstream geneLOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063M18.bB6Ng01-063M18.g
ACCDH883780DH883781
length1,1231,079
definitionDH883780|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M18, 5' end.DH883781|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgctcactataagtaaatagtaatagatgttgctgcagaccct
ctgggtcccttgtcttcgtggaatgagtctctggagcaggtggacaagga
gtctgggggaattgacagacagactcaacacaagggagtgtggatctgaa
tgtaatttgtcaaatccagcaccaaactttttatacagaagaaaataggg
aagttgggtgacgcacctgcgatactggattcttacacaaaacaaaggaa
tacaaatatggaagaattggcaggaaccaactggggtaaaactcaatgtt
aacaactgggatcaaaaacagctccaccagaaagaggaacactcctccat
tgttggtgggattgcaggcttgtacaaccactctggaaatcagtctggtg
gttcctcaggaaattggacatagtactaccggaggatccagcaatacctc
tcctgggcatatatccagaagatgccccaactggtaagaaggacacatgc
tccactatgttcatagcagccttatttataatagccagaagctggaaaga
acccagatgcccctcaacagaggtatggatacagaaaatgtggtacatct
acacaatggagtactactcagctattaaaaagaatgaatttatgaaattc
ctagccaaatggatggacctggagggcatcatcctgagtgatgtaaccca
atcacaaagaactcgcacaatatgtactcactgataagtggatattagcc
caaaacctaggatacccaagatataagatacaatttcctaaacacatgaa
actcaagaaaaatgaagactgaagtgtggacactatgccccctcctttgg
agtgggaacaaaacaccctttgtaaggagtaccagagacaagtttggagc
tgagatgaaagatggtccatggtagagactccattatcaaaggatccacc
ccattaatcagcatccgaccgcttgacaccattgcattcactagcaagaa
tttattcgaaggacccaatgtgacttgtctctttgtgtactatgccgggg
atctagcaaaccagaattgaatgctcacagtctagcttatgtatagatct
acagggctccaaggaaggagcta
gaattcttctgtttcttttttttcagtttgataccagtctgcctgctcta
tgcagtgagttccaggacagacagtactacccagtgaaactgcttcggga
aaacagaataaacaaaaagatcacagcattaggaaggctgagaaccactg
acttagacaacaaggcaaacatcaatcacacatacttgctgacagaggaa
acactggcttcctctgctacaagaagaagcaccccccattctcaagatcc
acccaaagccctgccaagttgcagaatccctgtaaccacactgcccagca
aaggcatacaaaccttgctttatcaatgtaaatacaaaggctggccagtg
gaggcagtaaaccccaaatggcagtcttacctaagagccaagatagcaaa
tccatccattggagaaactgagagcaaattttgcctgtcttgtgtttcta
caatctggcacctctggcctcacaacttagactaatgaaggtctgtcaat
cacaaccagagagagatctcacctcaaaaggtgctgacgcaaggaggcaa
gagtcatgacaagtttgggacagatagaaaaaactgcaaaggttatcata
aagtggcagagttcagaaggaccacgtggaaaatgctcagttaattacaa
gaatatgagggtggagagatgggatatgaagcagattactggagaaagtg
gggaagagagccacccccccccccaaaatataaggagaaatcctggtaga
aaagaatacatatcactaaagaattcaatgaacaatttcaagagtacgtt
caagcagtagatctcagaaggttatacacagggcaattccattaggagag
aaaacccatgaaagggagtgaagagatgctgagccgttacaaagcatccc
cgagaaaactactagaaaagacccctaagtttacagaaacccgactccag
aaaagcttactaatgaggcactcctgacagatgtatggagacatggctgt
agttgggtcctgcctctcctagagatcggggtgctgaacatgttctcaat
aatgtacaatggcttgggctatttggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14271065_14272152
seq2: B6Ng01-063M18.g_73_1151

seq1  GAATTCTTCTGTTTCTTTTTTTTCAGTTTGATACCAGTCTGCCTGCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTTTCTTTTTTTTCAGTTTGATACCAGTCTGCCTGCTCTA  50

seq1  TGCAGTGAGTTCCAGGACAGACAGTACTACCCAGTGAAACTGCTTCGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGAGTTCCAGGACAGACAGTACTACCCAGTGAAACTGCTTCGGGA  100

seq1  AAACAGAATAAACAAAAAGATCACAGCATTAGGAAGGCTGAGAACCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATAAACAAAAAGATCACAGCATTAGGAAGGCTGAGAACCACTG  150

seq1  ACTTAGACAACAAGGCAAACATCAATCACACATACTTGCTGACAGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGACAACAAGGCAAACATCAATCACACATACTTGCTGACAGAGGAA  200

seq1  ACACTGGCTTCCTCTGCTACAAGAAGAAGCACCCCCCATTCTCAAGATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCTTCCTCTGCTACAAGAAGAAGCACCCCCCATTCTCAAGATCC  250

seq1  ACCCAAAGCCCTGCCAAGTTGCAGAATCCCTGTAACCACACTGCCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAGCCCTGCCAAGTTGCAGAATCCCTGTAACCACACTGCCCAGCA  300

seq1  AAGGCATACAAACCTTGCTTTATCAATGTAAATACAAAGGCTGGCCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATACAAACCTTGCTTTATCAATGTAAATACAAAGGCTGGCCAGTG  350

seq1  GAGGCAGTAAACCCCAAATGGCAGTCTTACCTAAGAGCCAAGATAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTAAACCCCAAATGGCAGTCTTACCTAAGAGCCAAGATAGCAAA  400

seq1  TCCATCCATTGGAGAAACTGAGAGCAAATTTTGCCTGTCTTGTGTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCATTGGAGAAACTGAGAGCAAATTTTGCCTGTCTTGTGTTTCTA  450

seq1  CAATCTGGCACCTCTGGCCTCACAACTTAGACTAATGAAGGTCTGTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGGCACCTCTGGCCTCACAACTTAGACTAATGAAGGTCTGTCAAT  500

seq1  CACAACCAGAGAGAGATCTCACCTCAAAAGGTGCTGACGCAAGGAGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCAGAGAGAGATCTCACCTCAAAAGGTGCTGACGCAAGGAGGCAA  550

seq1  GAGTCATGACAAGTTTGGGACAGATAGAAAAAACTGCAAAGGTTATCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGACAAGTTTGGGACAGATAGAAAAAACTGCAAAGGTTATCATA  600

seq1  AAGTGGCAGAGTTCAGAAGGACCACGTGGAAAATGCTCAGTTAATTACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCAGAGTTCAGAAGGACCACGTGGAAAATGCTCAGTTAATTACAA  650

seq1  GAATATGAGGGTGGAGAGATGGGATATGAAGCAGATTACTGGAGAAAGT-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATATGAGGGTGGAGAGATGGGATATGAAGCAGATTACTGGAGAAAGTG  700

seq1  GGGAAGAGAGCCACCCCCCCCCCCAAAATATAAGGAGAAATCCTGGTAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGAGCCACCCCCCCCCCCAAAATATAAGGAGAAATCCTGGTAGA  750

seq1  AAAGAATACATATCACTAAAGAATTCAATGAACAA-TTCAAGAGTACGTT  798
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAGAATACATATCACTAAAGAATTCAATGAACAATTTCAAGAGTACGTT  800

seq1  CAAGCAAGTAGATCTCAGAAGG-TATACACAGGGCAATTCCATTAGAAGA  847
      ||||| |||||||||||||||| ||||||||||||||||||||||| |||
seq2  CAAGC-AGTAGATCTCAGAAGGTTATACACAGGGCAATTCCATTAGGAGA  849

seq1  GAAAAACCATGAAAGGGAGTGAAGAGATGCTGAGGCCGTTACAAAGCATC  897
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAAACCCATGAAAGGGAGTGAAGAGATGCTGA-GCCGTTACAAAGCATC  898

seq1  CACCGAGAAAACTACTTGAAAAAGACACCT-AGGTTACAGAAACACAGAC  946
      | |||||||||||||| | ||||||| ||| || |||||||||| | |||
seq2  C-CCGAGAAAACTACTAG-AAAAGACCCCTAAGTTTACAGAAAC-CCGAC  945

seq1  TCCAAGAAAAGCTTACTAATGAGAGCACTCCTGACAGATGTATGGAGACA  996
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCC-AGAAAAGCTTACTAATGAG-GCACTCCTGACAGATGTATGGAGACA  993

seq1  TGGCTGTAGTTTGGGTTCCTGCCTCT-CTAGAGATCGGTGGTGCTGAACA  1045
      |||||||||||  || |||||||||| ||||||||||| |||||||||||
seq2  TGGCTGTAGTT--GGGTCCTGCCTCTCCTAGAGATCGG-GGTGCTGAACA  1040

seq1  TTGTTCTCAAATACATGTACAATTGCCTTGTGCTATTTTGCAA  1088
       ||||||| |||| |||||||| || |||| ||||||| ||||
seq2  -TGTTCTC-AATA-ATGTACAA-TGGCTTGGGCTATTTGGCAA  1079