BAC Information

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BAC

Clone NameB6Ng01-064E24
Chromosome4 (Build37)
Map Location 82,245,182 - 82,246,250
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040144, EG668895, LOC100040164, EG545641, Nfib
Downstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064E24.bB6Ng01-064E24.g
ACCDH884137DH884138
length1,0591,247
definitionDH884137|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E24, 5' end.DH884138|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactgggattcttgagatcaaacaaaatttttaaaagatgtaag
cagaattttggaatgtttgattaaatttagggtctatgaatacaaggggt
gactcagaggtttcctgccagcttgggatgttgtgttgctatttctgaag
gtaacttagtgtcactccagaacacatgcatagacccaatactaagcttt
tactgaccatgacaaactcagttttcaattctacatttgcaaaagattat
ttagtaaaactcagcatctgatgacagaaaagaatgagagagggagagag
agagagagagagagagagagagagactgagagagagagagagacctttgc
gaacattttgccaaaaggtaataggttttcttatagtccctgtgtctcag
aagtttgatctcatataattcctttataaatcatcattattcccttacat
tgccttagtccttgcagtttcattagtgaaaatatatctagggtgtattc
ccacagtctctttcagtatagcaagacgtgagacacgcttcttgccaagt
tttcatagtacattgcaataactctataaaaagaagacatacagagacaa
agtggctaccaaaggaaaaaggtttaattttccctcagtactgaggattg
aacacagggccttatgcaagttggtcaaatgctccaccacagacctcgat
ctccactctaccctcccttttcttttaacttttcactttgaaacaagtct
agctaagttatggctaggtttcacccgactctgtagctcaggctggcatt
caccttgtgatcctcctgcctcagccattctaagtagtaacagggattat
agtttgctcctcaagactggctctttctccattttgttcatttttccttt
tatccctttctcctgggaaactcacttgtgagtctgtggcctggagaagt
tgaccctctgagtgcctgctccttcgtcaataagatggaattagtaacat
cgcccaccacaggatcaggagaataaacttacggattatactataccata
cttacagtg
gaattctttcagaccatcaaataagacctaatatcaatactcttcaaact
attccacaaaatagaaacagaaggaacactactgaattcattctatgaag
ctgataccaaaacctcacaaagaaagagaacttcagactaatttccctta
tgaatattgatgcaaaaatactcaataaaatttttgcaaatcaaatccaa
accaagaacacattaaaatgatcatccatcatgatcaagtaggcttcatc
ccagggatgcagggatggttcaatatatggaaatacataaatgtaatcca
ctatataaataaactcaaagaaaaaaactacatgatcatttcattagtgc
tgagaaagcatttgacaaaatgcagcaccccttcatgataaaagtcttgt
aaatatcaggaattcaaggcccatacctaaacatattaaaagcaagatac
agcaaaccagtagccaacatcaaactaaatggagagaaacttgaagcaat
cccactaaaatcaaggactagacaaggctgcccactctctctctacatat
tcactataccactggaaatcttagtaatgagcaattagacaacaaaagga
ggtcaaaaggatacaaattgaaaaggaagaagtcaaaatatcactatttg
cagatgatataatagtatacttaagtgacccccaaaactccaccagagaa
ctcctatagctgataaacagcttcagcaagatagccgatataaaattaat
gcaaaaaaatccgtagccttcctatactcaaaggataacaggctgagaaa
gaaattagtgaaatgacaccctttacaataatcacaaacaatataaaata
ccctggtgtgactctaaccaaacaagagaaagatttgtatgacagacctt
caaatctctgaagaagaatcgagaaactcaaaaagatgaaatctccatcg
tggatgtcaggataaataagtaaatggccatctgcaaaaacatcaacaga
tcagtgcaattccatcaaattccaactcattcttctgaatggaaagagag
aatttgcaaattcattgggaaaaaaaaaaatccagaaagcaaaaacattc
tcaacaataaaagacctctggggaaaccgcaccctgacctcacgcgttaa
cagacataggtaaaccgtttataatggtcagaacacgagcaggatactgt
agtttggaactcgaatgtaaccccatccgatctgaacgaaccatcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82245182_82246250
seq2: B6Ng01-064E24.b_48_1106

seq1  GAATTCAACTGGGATTCTTGAGATCAAACAAAATTTTTAAAAGATGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGGGATTCTTGAGATCAAACAAAATTTTTAAAAGATGTAAG  50

seq1  CAGAATTTTGGAATGTTTGATTAAATTTAGGGTCTATGAATACAAGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTGGAATGTTTGATTAAATTTAGGGTCTATGAATACAAGGGGT  100

seq1  GACTCAGAGGTTTCCTGCCAGCTTGGGATGTTGTGTTGCTATTTCTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAGGTTTCCTGCCAGCTTGGGATGTTGTGTTGCTATTTCTGAAG  150

seq1  GTAACTTAGTGTCACTCCAGAACACATGCATAGACCCAATACTAAGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTAGTGTCACTCCAGAACACATGCATAGACCCAATACTAAGCTTT  200

seq1  TACTGACCATGACAAACTCAGTTTTCAATTCTACATTTGCAAAAGATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACCATGACAAACTCAGTTTTCAATTCTACATTTGCAAAAGATTAT  250

seq1  TTAGTAAAACTCAGCATCTGATGACAGAAAAGAATGAGAGAGGGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAAACTCAGCATCTGATGACAGAAAAGAATGAGAGAGGGAGAGAG  300

seq1  AGAGAGAGAGAGAGAGAGAGAGAGACTGAGAGAGAGAGAGAGACCTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGACTGAGAGAGAGAGAGAGACCTTTGC  350

seq1  GAACATTTTGCCAAAAGGTAATAGGTTTTCTTATAGTCCCTGTGTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTTGCCAAAAGGTAATAGGTTTTCTTATAGTCCCTGTGTCTCAG  400

seq1  AAGTTTGATCTCATATAATTCCTTTATAAATCATCATTATTCCCTTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGATCTCATATAATTCCTTTATAAATCATCATTATTCCCTTACAT  450

seq1  TGCCTTAGTCCTTGCAGTTTCATTAGTGAAAATATATCTAGGGTGTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAGTCCTTGCAGTTTCATTAGTGAAAATATATCTAGGGTGTATTC  500

seq1  CCACAGTCTCTTTCAGTATAGCAAGACGTGAGACACGCTTCTTGCCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCTCTTTCAGTATAGCAAGACGTGAGACACGCTTCTTGCCAAGT  550

seq1  TTTCATAGTACATTGCAATAACTCTATAAAAAGAAGACATACAGAGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGTACATTGCAATAACTCTATAAAAAGAAGACATACAGAGACAA  600

seq1  AGTGGCTACCAAAGGAAAAAGGTTTAATTTTCCCTCAGTACTGAGGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTACCAAAGGAAAAAGGTTTAATTTTCCCTCAGTACTGAGGATTG  650

seq1  AACACAGGGCCTTATGCAAGTTGGTCAAATGCTCCACCACAGACCTCGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGGCCTTATGCAAGTTGGTCAAATGCTCCACCACAGACCTCGAT  700

seq1  CTCCACTCTACCCTCCCTTTTCTTTTAACTTTTCACTTTGAAACAAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCTACCCTCCCTTTTCTTTTAACTTTTCACTTTGAAACAAGTCT  750

seq1  AGCTAAGTTATGGCTAGGTTTCACCCGACTCTGTAGCTCAGGCTGGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTTATGGCTAGGTTTCACCCGACTCTGTAGCTCAGGCTGGCATT  800

seq1  CACCTTGTGATCCTCCTGCCTCAGCCATTCTAAGTAGTAACAGGGATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGTGATCCTCCTGCCTCAGCCATTCTAAGTAGTAACAGGGATTAT  850

seq1  AGGTTTGCTCCTCAAGACTGGCTCTTTCTCCATTTTGTTCATTTTTCCTT  900
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GTTTGCTCCTCAAGACTGGCTCTTTCTCCATTTTGTTCATTTTTCCTT  899

seq1  TTATCCCTTTCCTCCTGGGAAACTCACTTGTGAGTCTGTGGCCTGGAGAA  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCTTT-CTCCTGGGAAACTCACTTGTGAGTCTGTGGCCTGGAGAA  948

seq1  GGTTGACCCTCTGAGTGCCTTGCTCTTTCGTCCATAAGATGGAATTAGTA  1000
       |||||||||||||||||| ||||| |||||| |||||||||||||||||
seq2  -GTTGACCCTCTGAGTGCC-TGCTCCTTCGTCAATAAGATGGAATTAGTA  996

seq1  ACATCGCCCACCCAACAGGATCAGGAGAATTAAACTTACTGTATATATAC  1050
      ||||||||||||  ||||||||||||||| ||||||||| | || |||||
seq2  ACATCGCCCACC--ACAGGATCAGGAGAA-TAAACTTAC-GGAT-TATAC  1041

seq1  TAATACATACTTAGCAGTG  1069
      ||   |||||||| |||||
seq2  TATACCATACTTA-CAGTG  1059