BAC Information

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BAC

Clone NameB6Ng01-064L14
Chromosome4 (Build37)
Map Location 98,832,514 - 99,060,124
singlet/doubletdoublet
Overlap geneLOC665193, Atg4c
Upstream geneLOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl, L1td1, Ankrd38, LOC100039541, Usp1, Dock7, Angptl3
Downstream geneLOC665212, LOC638890, LOC100042589, Foxd3, Alg6, Itgb3bp, BC020077, Pgm2, Ror1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064L14.bB6Ng01-064L14.g
ACCDH884423DH884424
length9271,130
definitionDH884423|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L14, 5' end.DH884424|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,059,566 - 99,060,124)(98,832,514 - 98,833,662)
sequence
gccacttttagatttcactggaaatttgcagtgtgttttcatattgtaaa
gtctgtaagttcaatagaaacgaaattcttcaaaatcatctagccttcag
ctttcgaacatggatggtgatctcttacaagctcatgtaattgaatgtag
ggttgtcaagattttagcaacagaaagatgtttctgagtgcacagcaacc
aaaagttaacttagtctcaaatgtgtagtgaatcttgggtgttttgtctg
tgctcactcgtgtcacatttcattacttcagttcaacctaggttctaagc
acgcagcaagcacactctgtactctgtgcactgccattgcaaggtcaacc
aacactgcctgaacagatgggggttattgtgtcgccaattgcagggattt
tactctacaaagttttctgctttcacagaaccataatagtttagttatac
aaaacaaagctttagtattttcctgtccctattcctcagaatgtgactat
caaagtagtatgcctttgattggattggaatatgtgatcttgaagataat
ttgataatctaaatttatttttaaaaagatttaattatttatgtatatga
agattctgtcttcctgtcatctgcatgacagaagaggacatcagataaat
ggttgtgagccaccatgtggttgctgggaattgaactcaggacctctaga
agggcaaccagtgctcgtaatcaccgagtcatctctccagcccaataatc
taaatttgtttgaaaaagttctatatgaaatttgggggtgggaaacggga
taggattctaatcatttctgaatggccttaaacatggttctgcattgtct
actatgcatttatacaaagtgatgttcttcagcaatggaagatataaagt
caaagtatcagtcaactctgataaatg
gaattccatagtctgcatgaggagctgggaagtgcagttttttcggcagg
atgctatcatgtctaatttacatttttttgtcttttctaatatatatttt
ttaattttatgtgtatgagtgtttggcttgaggatctgtctatgtgctgt
gtgcatgtatatatgtttatgtgctacatgcatgtaagtgccagatgccc
tggagcttgagctatagagggttgttagctgctgtgggtgctgggaactg
aacctgctgttgttaatcccgagatttgcaagaggaaaaccagttccaca
gttctaagccaaatttgaagcgaactgagcaggatggaatctggtcaggt
gcactctgggatctcagggagtggcgttggcgttgattcgtgttttgcag
cggcttaaaaaggtaaaacccacaattcactgcatttcccaatcagggcc
aagaatacatcctggtgtatctcctgcctccgtgtgatcaagcacatctg
gtgtagttggttcaaataaacttgtttaggggactgaagcatttcttgtg
ttcttatacctctgcctcccttccaacccttagtccaccctaatcccttc
cgatacttcagctctaggtaggagagaaagaaggttagagtggaaagggg
acataaacctctaaaggctactttcgaattggggtcatcaggagggtcct
tcctgacaggatggccctcagaggagatacggaggatgagggatgcagtg
ggtcaccctgtatgactgactccctttatctttagcgtttttagagaccc
taagctataataaaaaaagaaaccttaaatcacagcctctcccctggcca
gcatatctctgtttgccctgcatcaagtatattgtttcagtttgctcagg
ggcagatactccaagaagtttcctagaatatggcctcatctagctttgtt
gcttttctgtgcttaatgacctccagggcataaggaggacttccaaatat
ggccacataaagtattttaggattttctgtaaagatctgaacatattttc
tcagggaaaatataaatataaatgcaaaagcttcctcaatgcgtacacat
cgagatacaattccaaaagtaggggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_99059566_99060124
seq2: B6Ng01-064L14.b_54_612 (reverse)

seq1  GATTATCAAATTATCTTCAAGATCACATATTCCAATCCAATCAAAGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCAAATTATCTTCAAGATCACATATTCCAATCCAATCAAAGGCAT  50

seq1  ACTACTTTGATAGTCACATTCTGAGGAATAGGGACAGGAAAATACTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTGATAGTCACATTCTGAGGAATAGGGACAGGAAAATACTAAAG  100

seq1  CTTTGTTTTGTATAACTAAACTATTATGGTTCTGTGAAAGCAGAAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTGTATAACTAAACTATTATGGTTCTGTGAAAGCAGAAAACTT  150

seq1  TGTAGAGTAAAATCCCTGCAATTGGCGACACAATAACCCCCATCTGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGTAAAATCCCTGCAATTGGCGACACAATAACCCCCATCTGTTCA  200

seq1  GGCAGTGTTGGTTGACCTTGCAATGGCAGTGCACAGAGTACAGAGTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTTGGTTGACCTTGCAATGGCAGTGCACAGAGTACAGAGTGTGC  250

seq1  TTGCTGCGTGCTTAGAACCTAGGTTGAACTGAAGTAATGAAATGTGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCGTGCTTAGAACCTAGGTTGAACTGAAGTAATGAAATGTGACAC  300

seq1  GAGTGAGCACAGACAAAACACCCAAGATTCACTACACATTTGAGACTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGCACAGACAAAACACCCAAGATTCACTACACATTTGAGACTAAG  350

seq1  TTAACTTTTGGTTGCTGTGCACTCAGAAACATCTTTCTGTTGCTAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTTGGTTGCTGTGCACTCAGAAACATCTTTCTGTTGCTAAAATC  400

seq1  TTGACAACCCTACATTCAATTACATGAGCTTGTAAGAGATCACCATCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAACCCTACATTCAATTACATGAGCTTGTAAGAGATCACCATCCAT  450

seq1  GTTCGAAAGCTGAAGGCTAGATGATTTTGAAGAATTTCGTTTCTATTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAAAGCTGAAGGCTAGATGATTTTGAAGAATTTCGTTTCTATTGAA  500

seq1  CTTACAGACTTTACAATATGAAAACACACTGCAAATTTCCAGTGAAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGACTTTACAATATGAAAACACACTGCAAATTTCCAGTGAAATCT  550

seq1  AAAAGTGGC  559
      |||||||||
seq2  AAAAGTGGC  559

seq1: chr4_98832514_98833662
seq2: B6Ng01-064L14.g_68_1197

seq1  GAATTCCATAGTCTGCATGAGGAGCTGGGAAGTGCAGTTTTTTCGGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGTCTGCATGAGGAGCTGGGAAGTGCAGTTTTTTCGGCAGG  50

seq1  ATGCTATCATGTCTAATTTACATTTTTTTGTCTTTTCTAATATATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATCATGTCTAATTTACATTTTTTTGTCTTTTCTAATATATATTTT  100

seq1  TTAATTTTATGTGTATGAGTGTTTGGCTTGAGGATCTGTCTATGTGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTATGTGTATGAGTGTTTGGCTTGAGGATCTGTCTATGTGCTGT  150

seq1  GTGCATGTATATATGTTTATGTGCTACATGCATGTAAGTGCCAGATGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTATATATGTTTATGTGCTACATGCATGTAAGTGCCAGATGCCC  200

seq1  TGGAGCTTGAGCTATAGAGGGTTGTTAGCTGCTGTGGGTGCTGGGAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTTGAGCTATAGAGGGTTGTTAGCTGCTGTGGGTGCTGGGAACTG  250

seq1  AACCTGCTGTTGTTAATCCCGAGATTTGCAAGAGGAAAACCAGTTCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTGTTGTTAATCCCGAGATTTGCAAGAGGAAAACCAGTTCCACA  300

seq1  GTTCTAAGCCAAATTTGAAGCGAACTGAGCAGGATGGAATCTGGTCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGCCAAATTTGAAGCGAACTGAGCAGGATGGAATCTGGTCAGGT  350

seq1  GCACTCTGGGATCTCAGGGAGTGGCGTTGGCGTTGATTCGTGTTTTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTGGGATCTCAGGGAGTGGCGTTGGCGTTGATTCGTGTTTTGCAG  400

seq1  CGGCTTAAAAAGGTAAAACCCACAATTCACTGCATTTCCCAATCAGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTAAAAAGGTAAAACCCACAATTCACTGCATTTCCCAATCAGGGCC  450

seq1  AAGAATACATCCTGGTGTATCTCCTGCCTCCGTGTGATCAAGCACATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATACATCCTGGTGTATCTCCTGCCTCCGTGTGATCAAGCACATCTG  500

seq1  GTGTAGTTGGTTCAAATAAACTTGTTTAGGGGACTGAAGCATTTCTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTGGTTCAAATAAACTTGTTTAGGGGACTGAAGCATTTCTTGTG  550

seq1  TTCTTATACCTCTGCCTCCCTTCCAACCCTTAGTCCACCCTAATCCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATACCTCTGCCTCCCTTCCAACCCTTAGTCCACCCTAATCCCTTC  600

seq1  CGATACTTCAGCTCTAGGTAGGAGAGAAAGAAGGTTAGAGTGGAAAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACTTCAGCTCTAGGTAGGAGAGAAAGAAGGTTAGAGTGGAAAGGGG  650

seq1  ACATAAACCTCTAAAGGCTAC-TTCGAATTGGGGTCATCAGGAGGGTCCT  699
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACATAAACCTCTAAAGGCTACTTTCGAATTGGGGTCATCAGGAGGGTCCT  700

seq1  TCCTGACAGGATGGCCCTCAGAGGAGATACGGAGGATGAGGGATGCAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAGGATGGCCCTCAGAGGAGATACGGAGGATGAGGGATGCAGTG  750

seq1  GGTCACCCTGTATGACTGACTCCCTTTATCTTTAAGCGTTTTTAGAGACG  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  GGTCACCCTGTATGACTGACTCCCTTTATCTTT-AGCGTTTTTAGAGACC  799

seq1  CTAAGCCTATAAT-AAAAAAGAAACCTTAAATCAGCAGCCTCTCCCCCTG  848
      ||||| ||||||| |||||||||||||||||||| |||||||| ||||||
seq2  CTAAG-CTATAATAAAAAAAGAAACCTTAAATCA-CAGCCTCT-CCCCTG  846

seq1  GCCAGCATATCTCTGTTTGCCCTGCATCAAGTATATTGTTTCAGTTTGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCATATCTCTGTTTGCCCTGCATCAAGTATATTGTTTCAGTTTGCT  896

seq1  CAGGGGCAGATACTCCAAGAAGTTTCCTAAGATAATGGCCTCATCTAGCT  948
      |||||||||||||||||||||||||||| |||  ||||||||||||||||
seq2  CAGGGGCAGATACTCCAAGAAGTTTCCT-AGAATATGGCCTCATCTAGCT  945

seq1  ATG-TGCTTTTCTGTGCTTAAATGACCTCCAGGGCATAAGGAGGACTTCC  997
       || ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGTTGCTTTTCTGTGCTT-AATGACCTCCAGGGCATAAGGAGGACTTCC  994

seq1  AAATAGTGGCCACATAAAGTTAATTTTAGGATTTTTTGTAAAAGATTCAG  1047
      ||||| ||||||||||||||  ||||||||||||| ||| ||||||    
seq2  AAATA-TGGCCACATAAAGT--ATTTTAGGATTTTCTGT-AAAGATCTGA  1040

seq1  ACATAATTTTTCTCAGGAAAAGATATAAAATGAATCAAAATGCAGAAAGT  1097
      |||||  |||||||||| ||| |||||     |||  ||||||| |||| 
seq2  ACATA--TTTTCTCAGGGAAA-ATATA-----AATATAAATGCA-AAAG-  1080

seq1  CTCCCATAATGC-AACACACAGAGACCAAACCCCAAAAGTTAGAGGGGGG  1146
      || ||  |||||  |||||  ||||   ||  ||||||||   |||||||
seq2  CTTCCTCAATGCGTACACATCGAGATACAATTCCAAAAGT---AGGGGGG  1127

seq1  GGT  1149
      |||
seq2  GGT  1130