BAC Information

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BAC

Clone NameB6Ng01-065F23
Chromosome4 (Build37)
Map Location 81,969,950 - 82,116,926
singlet/doubletdoublet
Overlap geneNfib
Upstream geneMpdz, LOC100040131, LOC100040144, EG668895, LOC100040164, EG545641
Downstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065F23.bB6Ng01-065F23.g
ACCDH884867DH884868
length1,029682
definitionDH884867|Mus musculus domesticus DNA, BAC clone: B6Ng01-065F23, 5' end.DH884868|Mus musculus domesticus DNA, BAC clone: B6Ng01-065F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,969,950 - 81,970,988)(82,116,245 - 82,116,926)
sequence
gaattctctgcagtaagaacccagcaatccaacgttctgctcctccttct
cggtttccctcttggtacaatgttctcctactgaacgatggacaataagg
gacacaagaacgtcaagaaataggaaacatgtccaacactatgtagtttc
catcacgtacagtcatttcctatgcatgtaaaaattccagcttcctctct
cttgcacacaggtattacaggacatatatttcaggtaatttagactccaa
ggtgtccagtctactttcaatgatttgctgatgcaagcaaacagaatgaa
atttaaagcatctaagatttcagttgcaaactcagttataaaatgtgaaa
gtaagtcaggcattatgcttcagaataaaatatcctcaaaggaatgtctc
tgatgtcccaaagtggacacaaggagcatcgaatgcacactgccctttgt
ggctcactttgctgggcacgaagagttacatagacattggtgggaattaa
tgaagaaaatgctctctccagtttcacaatttaaatacatgattacttga
attttaaccactcaataatttttttttggtaggagacaaaaacattgatt
ttgggtacattagaaagcctggaatatattattccaggtagagagtgcca
gtgttatttatactcacacttcactgcatggtctttctaacaatttcctg
gcgcgtattctccccaagtgtatgttctttataatcccaactttgcaaaa
taaagaaatcaacgaaacacgacatgtctaaatatcaacataaacaccat
aactgactatttctttagagaaagatagataatagcgcttgatttattga
cttaaaggtatggattgagttgggcaagttacagaggggtactcttcctt
ttattttaaaattaactctgaatatcctgacaattcatcatgggcactct
taagtatttaactttatgttggaaaataaactggagtttttctctgtgga
aacctatggagaatataatctgttcaaaa
gaattcctggtcaggaggaactgccccactgatggagtgaagcaagagca
gagtgtggggacagagattcctttgtggtcactttgtcacacaaaagtgc
gcttttgtgcatgataatttaaaaacagaactctcaagtgacatttttta
cctctcaaggtaatttttaccattgttttgagtcagaaaagggagggcac
actggatgcgccagctcaggggaggtcagagaaggagggttatggcttga
gaacagcagcacacaaaagttcctgctctagttgaagtgcacttgacata
gactgaactccttgtctaaagcttgtgctttacagctatctgcagagggc
atctgaaattcctttggtttctaatctatggcaagtgaacaagaatggat
gacaaagggatataaagatagagctcaaacaaggtgttgttaattctttc
tttcacctatgataactaatggaaagcttaaattactaaattcagaggag
tccgttgttgctacttgccaaattgtacatgcttgtgcgtctgtctaatt
catattgggaagccacaaacagaagcgcataatttggcaaaacaccaaaa
acatgcctcagcacacttctggagattcttccaaatgacttaatgattca
ggaatgtgtgtgtgtgagggtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_81969950_81970988
seq2: B6Ng01-065F23.b_45_1073

seq1  GAATTCTCTGCAGTAAGAACCCAGCAATCCAACGTTCTGCTCCTCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAGTAAGAACCCAGCAATCCAACGTTCTGCTCCTCCTTCT  50

seq1  CGGTTTCCCTCTTGGTACAATGTTCTCCTACTGAACGATGGACAATAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTCCCTCTTGGTACAATGTTCTCCTACTGAACGATGGACAATAAGG  100

seq1  GACACAAGAACGTCAAGAAATAGGAAACATGTCCAACACTATGTAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGAACGTCAAGAAATAGGAAACATGTCCAACACTATGTAGTTTC  150

seq1  CATCACGTACAGTCATTTCCTATGCATGTAAAAATTCCAGCTTCCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACGTACAGTCATTTCCTATGCATGTAAAAATTCCAGCTTCCTCTCT  200

seq1  CTTGCACACAGGTATTACAGGACATATATTTCAGGTAATTTAGACTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACACAGGTATTACAGGACATATATTTCAGGTAATTTAGACTCCAA  250

seq1  GGTGTCCAGTCTACTTTCAATGATTTGCTGATGCAAGCAAACAGAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCAGTCTACTTTCAATGATTTGCTGATGCAAGCAAACAGAATGAA  300

seq1  ATTTAAAGCATCTAAGATTTCAGTTGCAAACTCAGTTATAAAATGTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGCATCTAAGATTTCAGTTGCAAACTCAGTTATAAAATGTGAAA  350

seq1  GTAAGTCAGGCATTATGCTTCAGAATAAAATATCCTCAAAGGAATGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCAGGCATTATGCTTCAGAATAAAATATCCTCAAAGGAATGTCTC  400

seq1  TGATGTCCCAAAGTGGACACAAGGAGCATCGAATGCACACTGCCCTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCCAAAGTGGACACAAGGAGCATCGAATGCACACTGCCCTTTGT  450

seq1  GGCTCACTTTGCTGGGCACGAAGAGTTACATAGACATTGGTGGGAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACTTTGCTGGGCACGAAGAGTTACATAGACATTGGTGGGAATTAA  500

seq1  TGAAGAAAATGCTCTCTCCAGTTTCACAATTTAAATACATGATTACTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAATGCTCTCTCCAGTTTCACAATTTAAATACATGATTACTTGA  550

seq1  ATTTTAACCACTCAATAATTTTTTTTTGGTAGGAGACAAAAACATTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACCACTCAATAATTTTTTTTTGGTAGGAGACAAAAACATTGATT  600

seq1  TTGGGTACATTAGAAAGCCTGGAATATATTATTCCAGGTAGAGAGTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTACATTAGAAAGCCTGGAATATATTATTCCAGGTAGAGAGTGCCA  650

seq1  GTGTTATTTATACTCACACTTCACTGCATGGTCTTTCTAACAATTTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATTTATACTCACACTTCACTGCATGGTCTTTCTAACAATTTCCTG  700

seq1  GCGCGTATTCTCCCCAAGTGTATGTTCTTTATAATCCCAACTTTGCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGTATTCTCCCCAAGTGTATGTTCTTTATAATCCCAACTTTGCAAAA  750

seq1  TAAAGAAATCAACGAAACACGACATGTCTAAATATCAACATAAACACCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATCAACGAAACACGACATGTCTAAATATCAACATAAACACCAT  800

seq1  AACTGACTATTTCTTTAGAGAAAGATAGATAATAGCGCTTGAATATATTG  850
      ||||||||||||||||||||||||||||||||||||||||| || |||||
seq2  AACTGACTATTTCTTTAGAGAAAGATAGATAATAGCGCTTG-ATTTATTG  849

seq1  ACTTAGAGGTATGGATTGAGTTTGGGCAGGTTACAGAGGGGTTACTTCTT  900
      ||||| |||||||||||||| ||||||| |||||||||||| ||| ||||
seq2  ACTTAAAGGTATGGATTGAG-TTGGGCAAGTTACAGAGGGG-TAC-TCTT  896

seq1  CCTTTTTATTTTTAAAAATTAACTCTGAATATCCTGACAATTCATCATGG  950
      || |||||||||  ||||||||||||||||||||||||||||||||||||
seq2  CC-TTTTATTTT--AAAATTAACTCTGAATATCCTGACAATTCATCATGG  943

seq1  GCACTCTTAAGTATTTAACTTTATGTTGGGAAAATAAACTGGAGTTTTTC  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCACTCTTAAGTATTTAACTTTATGTT-GGAAAATAAACTGGAGTTTTTC  992

seq1  TCTGTGGAAACCTATGGGAGAATTATATCTTGTTCAAAA  1039
      ||||||||||||||| |||||| ||||   |||||||||
seq2  TCTGTGGAAACCTAT-GGAGAA-TATAATCTGTTCAAAA  1029

seq1: chr4_82116245_82116926
seq2: B6Ng01-065F23.g_68_749 (reverse)

seq1  CACACACACACACCCTCACACACACACATTCCTGAATCATTAAGTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACCCTCACACACACACATTCCTGAATCATTAAGTCATTT  50

seq1  GGAAGAATCTCCAGAAGTGTGCTGAGGCATGTTTTTGGTGTTTTGCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATCTCCAGAAGTGTGCTGAGGCATGTTTTTGGTGTTTTGCCAAA  100

seq1  TTATGCGCTTCTGTTTGTGGCTTCCCAATATGAATTAGACAGACGCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCGCTTCTGTTTGTGGCTTCCCAATATGAATTAGACAGACGCACAA  150

seq1  GCATGTACAATTTGGCAAGTAGCAACAACGGACTCCTCTGAATTTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTACAATTTGGCAAGTAGCAACAACGGACTCCTCTGAATTTAGTAA  200

seq1  TTTAAGCTTTCCATTAGTTATCATAGGTGAAAGAAAGAATTAACAACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCTTTCCATTAGTTATCATAGGTGAAAGAAAGAATTAACAACACC  250

seq1  TTGTTTGAGCTCTATCTTTATATCCCTTTGTCATCCATTCTTGTTCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGAGCTCTATCTTTATATCCCTTTGTCATCCATTCTTGTTCACTT  300

seq1  GCCATAGATTAGAAACCAAAGGAATTTCAGATGCCCTCTGCAGATAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGATTAGAAACCAAAGGAATTTCAGATGCCCTCTGCAGATAGCTG  350

seq1  TAAAGCACAAGCTTTAGACAAGGAGTTCAGTCTATGTCAAGTGCACTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCACAAGCTTTAGACAAGGAGTTCAGTCTATGTCAAGTGCACTTCA  400

seq1  ACTAGAGCAGGAACTTTTGTGTGCTGCTGTTCTCAAGCCATAACCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGCAGGAACTTTTGTGTGCTGCTGTTCTCAAGCCATAACCCTCCT  450

seq1  TCTCTGACCTCCCCTGAGCTGGCGCATCCAGTGTGCCCTCCCTTTTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACCTCCCCTGAGCTGGCGCATCCAGTGTGCCCTCCCTTTTCTGA  500

seq1  CTCAAAACAATGGTAAAAATTACCTTGAGAGGTAAAAAATGTCACTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACAATGGTAAAAATTACCTTGAGAGGTAAAAAATGTCACTTGAG  550

seq1  AGTTCTGTTTTTAAATTATCATGCACAAAAGCGCACTTTTGTGTGACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTTTTTAAATTATCATGCACAAAAGCGCACTTTTGTGTGACAAA  600

seq1  GTGACCACAAAGGAATCTCTGTCCCCACACTCTGCTCTTGCTTCACTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCACAAAGGAATCTCTGTCCCCACACTCTGCTCTTGCTTCACTCCA  650

seq1  TCAGTGGGGCAGTTCCTCCTGACCAGGAATTC  682
      ||||||||||||||||||||||||||||||||
seq2  TCAGTGGGGCAGTTCCTCCTGACCAGGAATTC  682