BAC Information

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BAC

Clone NameB6Ng01-065H10
Chromosome4 (Build37)
Map Location 63,630,282 - 63,803,759
singlet/doubletdoublet
Overlap geneTnc
Upstream geneZfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps
Downstream genePappa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065H10.bB6Ng01-065H10.g
ACCDH884932DH884933
length485471
definitionDH884932|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H10, 5' end.DH884933|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,630,282 - 63,630,772)(63,803,283 - 63,803,759)
sequence
aaatccaccaggatcagctggtgaggaggtcaagatactacactggaagt
gtaagagcaagcaaagcttgcatagaataagagcctaagcactatggggt
tcccccacaaatttccaggtacacagcagctgatctctacattgaacccc
agtgtcaacaaacccttatgttcagctgagcttctaatcagattctttgt
tcttggcataagtatgaaaggataagccaggactaaaagacactgggaag
aagtttctagcatggacagtggaaactaacccaaaccacagcaacaaaac
taatgtgatctagaagaaacataattcccgagctatagactacaatagca
gtgacatgtatttctgagcaaaagtgaagtagctacacagaatataggcg
agatcccttgtctatatgccccagtacaggggaacgccagggccaagaag
tgggagtgagtgggtaggggagcatggtgggggga
atttcatttggctgaaaaaataggccagactgtatccgtcagagctgtcc
tcccgccagccacaggggagcttggagatcatttgaagtaatttgccaac
aaaagactgaggactaaaaccaccacctgtggaccaaacattgtgagtct
gggggttgttcttttgtaacagcagagcttgggaatgcccaggaagggag
tgaggtcatctgtctggctatgggctgcatgttctgcaggtcttctcatt
ccacattacgtcatgctggaaaaagaaagtgtctggacattccttacaca
atctgcaggggtgtgaagtgaggcagacattggcttgctggagcgtcatg
gcacattgatctgctcacacatgtatatacacaattaacctcaccagcaa
ctatggaattcttgtggcatgacttgattctttgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_63630282_63630772
seq2: B6Ng01-065H10.b_48_538

seq1  GAATTCAAATCCACCAGGATCAGCTGGTGAGGAGGTCAAGATACTACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCACCAGGATCAGCTGGTGAGGAGGTCAAGATACTACACT  50

seq1  GGAAGTGTAAGAGCAAGCAAAGCTTGCATAGAATAAGAGCCTAAGCACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGTAAGAGCAAGCAAAGCTTGCATAGAATAAGAGCCTAAGCACTA  100

seq1  TGGGGTTCCCCCACAAATTTCCAGGTACACAGCAGCTGATCTCTACATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTCCCCCACAAATTTCCAGGTACACAGCAGCTGATCTCTACATTG  150

seq1  AACCCCAGTGTCAACAAACCCTTATGTTCAGCTGAGCTTCTAATCAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGTGTCAACAAACCCTTATGTTCAGCTGAGCTTCTAATCAGATT  200

seq1  CTTTGTTCTTGGCATAAGTATGAAAGGATAAGCCAGGACTAAAAGACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCTTGGCATAAGTATGAAAGGATAAGCCAGGACTAAAAGACACT  250

seq1  GGGAAGAAGTTTCTAGCATGGACAGTGGAAACTAACCCAAACCACAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAGTTTCTAGCATGGACAGTGGAAACTAACCCAAACCACAGCAA  300

seq1  CAAAACTAATGTGATCTAGAAGAAACATAATTCCCGAGCTATAGACTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAATGTGATCTAGAAGAAACATAATTCCCGAGCTATAGACTACA  350

seq1  ATAGCAGTGACATGTATTTCTGAGCAAAAGTGAAGTAGCTACACAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGTGACATGTATTTCTGAGCAAAAGTGAAGTAGCTACACAGAATA  400

seq1  TAGGCGAGATCCCTTGTCTATATGCCCCAGTACAGGGGAACGCCAGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGAGATCCCTTGTCTATATGCCCCAGTACAGGGGAACGCCAGGGCC  450

seq1  AAGAAGTGGGAGTGAGTGGGTAGGGGAGCATGGTGGGGGGA  491
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTGGGAGTGAGTGGGTAGGGGAGCATGGTGGGGGGA  491

seq1: chr4_63803283_63803759
seq2: B6Ng01-065H10.g_70_546 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACAAAGAATCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAAAGAATCAAGT  50

seq1  CATGCCACAAGAATTCCATAGTTGCTGGTGAGGTTAATTGTGTATATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCACAAGAATTCCATAGTTGCTGGTGAGGTTAATTGTGTATATACA  100

seq1  TGTGTGAGCAGATCAATGTGCCATGACGCTCCAGCAAGCCAATGTCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGCAGATCAATGTGCCATGACGCTCCAGCAAGCCAATGTCTGCC  150

seq1  TCACTTCACACCCCTGCAGATTGTGTAAGGAATGTCCAGACACTTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCACACCCCTGCAGATTGTGTAAGGAATGTCCAGACACTTTCTTT  200

seq1  TTCCAGCATGACGTAATGTGGAATGAGAAGACCTGCAGAACATGCAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCATGACGTAATGTGGAATGAGAAGACCTGCAGAACATGCAGCCC  250

seq1  ATAGCCAGACAGATGACCTCACTCCCTTCCTGGGCATTCCCAAGCTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGACAGATGACCTCACTCCCTTCCTGGGCATTCCCAAGCTCTGC  300

seq1  TGTTACAAAAGAACAACCCCCAGACTCACAATGTTTGGTCCACAGGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACAAAAGAACAACCCCCAGACTCACAATGTTTGGTCCACAGGTGGT  350

seq1  GGTTTTAGTCCTCAGTCTTTTGTTGGCAAATTACTTCAAATGATCTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGTCCTCAGTCTTTTGTTGGCAAATTACTTCAAATGATCTCCAA  400

seq1  GCTCCCCTGTGGCTGGCGGGAGGACAGCTCTGACGGATACAGTCTGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCTGTGGCTGGCGGGAGGACAGCTCTGACGGATACAGTCTGGCCT  450

seq1  ATTTTTTCAGCCAAATGGAATGAATTC  477
      ||||||||||||||||| |||||||||
seq2  ATTTTTTCAGCCAAATGAAATGAATTC  477