BAC Information

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BAC

Clone NameB6Ng01-065K15
Chromosome4 (Build37)
Map Location 116,064,911 - 116,239,326
singlet/doubletdoublet
Overlap geneMast2, LOC631400, Ipp, Tmem69, Gpbp1l1
Upstream geneCyp4a12b, LOC435802, LOC666393, LOC230641, Cyp4a14, Cyp4a10, LOC666168, LOC631037, LOC100040843, Cyp4b1, LOC546843, 4732418C07Rik, 4930544O15Rik, Atpaf1, Mobkl2c, Mknk1, Kncn, 6430628N08Rik, Dmbx1, Faah, Nsun4, Uqcrh, Lrrc41, Rad54l, 1520402A15Rik, Pomgnt1, Tspan1, 1700042G07Rik, LOC433748, Pik3r3
Downstream geneLOC622665, Nasp, Akr1a4, Prdx1, Mmachc, 0610037D15Rik, Tesk2, Toe1, Mutyh, Hpdl, LOC625336, LOC100041048, Zswim5, Urod, Hectd3, Eif2b3, Ptch2, 9530048O09Rik, LOC100041324, 4833401D15Rik, Plk3, Best4-ps, LOC625405, Rps8, Kif2c, Gm1661, Tmem53, 4931406I20Rik, LOC100041093, Prnpip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065K15.bB6Ng01-065K15.g
ACCDH885071DH885072
length1,0331,081
definitionDH885071|Mus musculus domesticus DNA, BAC clone: B6Ng01-065K15, 5' end.DH885072|Mus musculus domesticus DNA, BAC clone: B6Ng01-065K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,064,911 - 116,065,939)(116,238,250 - 116,239,326)
sequence
gaattcctaagacttaaaatatgtggctttgaaagcattcattcaacttt
taaaacctacctttataagataaaataccccaactttgttcattttgatt
actcatttcatatgcattacattattttttttaattacaattcttaattt
tatgtctatcagtcactatttttctttcatttttgtaattttcagattaa
ctgttttcaaaagaagcttttgcaaaaggttatataaaagaaaactataa
agaatgactatgtatagcattggaaatgtaaatgagttaaatacctaata
aaaaatggaaaaaaaaaaaaaaaaaaaagaatgactataatgaaacaata
gtcaagatgacctctctacttttcccaattaaaaggataattacaatctt
ttttccattacatgtaatcaccttttcagggtaagtctttgtggcagtct
tttactgttaatgaactacaaaagaactacaaaagactacaaaagattca
ttataattaggatataaaacaaatggaagagagagtacttgggaggcaga
ggcaggcagatctttgagttcaaggccagcctgtgtagtacagagagagt
tccaggacagccagggctgctacacacagaaaccatatctctaaaaaaag
tgaaagtagtaaaatattttagtcaaacaatttgtaatacagcaaacaca
aaagaaaagatcattacagagactagggatattgttcagtaaagttcttg
ggcatgagattttgttaggtgccccagagcaacataaaaagccagatgct
tgcttggtagcccagcactgcaaaggcagaagaaagacggatcctctggg
gctggctgttccgtcagtttcatcctaatagggcagccccaggtcccatg
ggaaagagctatctaaaaaacaaaggtagacggctctgagacacttctcg
ggcttctcagctacttatgaaaccatacacatctaacctaaaactgtaaa
ctaacaacttatgtgtccaaaatattgaaaagg
gaattctaaaagtctttatttctttgtagctcactggcacagcctgggta
tacttattcatggacacagcctcttcagctttctctcccagtaaaattaa
taaaatgccaatataaaaagggctaaaacaaacactatggactggagaga
tggctcagatgttaagagtctgataacaaacctgattaactgactatgat
ccccagaaccgataaagtaaaaaaatggaagcagattcccgacttacaca
caaaatgtaaaatacatatatttttaaaagagcaataaagatcatcgtaa
aaataaattagtagactaacacaaaaatcctgccagtgattaagtgctat
cattgtacctgccccaaaaaatttcctgaaattttcttaaagtaataaat
agaaacatttgcaacttttctcaggtagtcttctaaagctattacagtca
aaggacacaaatgtctaatgcaaacaaacctaataatactaccaaacaac
taaaaactaagtctaaaatcaaactcttccaaatgagaaatattaaaaga
taaattttaccagagcacagaatataaaacataaaagcatgcttattatt
gggatgcaatctgagcattactgttggcttttaagattcagatcattaag
gctgctatatttaggcagggatcatgaaacatgtttttttgttggtggta
gttgcttttctttaaaattattttatgtgagccggggtggtggcgcacgc
ctttagtcccagcactcgggaggcaggaggcaggcatatttctgagttcg
aggccagcctggtctacaaagtgagtttcaggacagctagggctacacag
agaaaccctgtctcgaaaaacaaaaataaataaattaataaataatgttt
gtatttttgtacatcatgtgctgggtgggtatacatgcaggctagaattg
ggcatctgatcctagaactagaatgaagacagttgttgatccccctttgg
ctgtagggaaccagacttgtgtcctctgcaaaaagccacaactggtcctc
actggccaaggtcccaccccctgtttgtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_116064911_116065939
seq2: B6Ng01-065K15.b_46_1078

seq1  GAATTCCTAAGACTTAAAATATGTGGCTTTGAAAGCATTCATTCAACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGACTTAAAATATGTGGCTTTGAAAGCATTCATTCAACTTT  50

seq1  TAAAACCTACCTTTATAAGATAAAATACCCCAACTTTGTTCATTTTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTACCTTTATAAGATAAAATACCCCAACTTTGTTCATTTTGATT  100

seq1  ACTCATTTCATATGCATTACATTATTTTTTTTAATTACAATTCTTAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTCATATGCATTACATTATTTTTTTTAATTACAATTCTTAATTT  150

seq1  TATGTCTATCAGTCACTATTTTTCTTTCATTTTTGTAATTTTCAGATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTATCAGTCACTATTTTTCTTTCATTTTTGTAATTTTCAGATTAA  200

seq1  CTGTTTTCAAAAGAAGCTTTTGCAAAAGGTTATATAAAAGAAAACTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCAAAAGAAGCTTTTGCAAAAGGTTATATAAAAGAAAACTATAA  250

seq1  AGAATGACTATGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACTATGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATA  300

seq1  AAAAATGG-AAAAAAAAAAAAAAAAAAAGAATGACTATAATGAAACAATA  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGAAAAAAAAAAAAAAAAAAAAGAATGACTATAATGAAACAATA  350

seq1  GTCAAGATGACCTCTCTACTTTTCCCAATTAAAAGGATAATTACAATCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGATGACCTCTCTACTTTTCCCAATTAAAAGGATAATTACAATCTT  400

seq1  TTTTCCATTACATGTAATCACCTTTTCAGGGTAAGTCTTTGTGGCAGTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTACATGTAATCACCTTTTCAGGGTAAGTCTTTGTGGCAGTCT  450

seq1  TTTACTGTTAATGAACTACAAAAGAACTACAAAAGACTACAAAAGATTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTTAATGAACTACAAAAGAACTACAAAAGACTACAAAAGATTCA  500

seq1  TTATAATTAGGATATAAAACAAATGGAAGAGAGAGTACTTGGGAGGCAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTAGGATATAAAACAAATGGAAGAGAGAGTACTTGGGAGGCAGA  550

seq1  GGCAGGCAGATCTTTGAGTTCAAGGCCAGCCTGTGTAGTACAGAGAGAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAGATCTTTGAGTTCAAGGCCAGCCTGTGTAGTACAGAGAGAGT  600

seq1  TCCAGGACAGCCAGGGCTGCTACACACAGAAACCATATCTCTAAAAAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCAGGGCTGCTACACACAGAAACCATATCTCTAAAAAAAG  650

seq1  TGAAAGTAGTAAAATATTTTAGTCAAACAA-TTGTAATACAGCAAACACA  698
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGAAAGTAGTAAAATATTTTAGTCAAACAATTTGTAATACAGCAAACACA  700

seq1  AAAGAAAAGATCATTACAGAGACTAGGGATATTGTTCAGTAAAGTTCTT-  747
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAGAAAAGATCATTACAGAGACTAGGGATATTGTTCAGTAAAGTTCTTG  750

seq1  GGCATGAGAATTTGTTA-GTGCCCCAGAGCCAACATAAAAAGCCAGATGC  796
      ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
seq2  GGCATGAGATTTTGTTAGGTGCCCCAGAG-CAACATAAAAAGCCAGATGC  799

seq1  TTGCTTGGTAAGCCCAGCACTGCAAAGGCAG-AGAAAGACGGAT-CTCTG  844
      ||||||||| ||||||||||||||||||||| |||||||||||| |||||
seq2  TTGCTTGGT-AGCCCAGCACTGCAAAGGCAGAAGAAAGACGGATCCTCTG  848

seq1  GGGCTGGCTGTTCGGTCAGTTTCAT-CTAATAGGGCAGCCCCAGGTCCCA  893
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  GGGCTGGCTGTTCCGTCAGTTTCATCCTAATAGGGCAGCCCCAGGTCCCA  898

seq1  GGGAAAAGAGCTATCTAAAAAAC-AAGGTAGACAGCTCTGAGAACAC-TC  941
       || ||||||||||||||||||| ||||||||| |||||||| |||| ||
seq2  TGGGAAAGAGCTATCTAAAAAACAAAGGTAGACGGCTCTGAG-ACACTTC  947

seq1  TCTGGCCTCTTCAGCTACCTATGAAACCATACACATCTAACCTAAGACAT  991
      || ||| || |||||||| |||||||||||||||||||||||||| || |
seq2  TCGGGCTTC-TCAGCTACTTATGAAACCATACACATCTAACCTAAAAC-T  995

seq1  GTAAACTAACAAC-TATGTGTCCAAAATACATGAAAAGG  1029
      ||||||||||||| |||||||||||||||  ||||||||
seq2  GTAAACTAACAACTTATGTGTCCAAAATA-TTGAAAAGG  1033

seq1: chr4_116238250_116239326
seq2: B6Ng01-065K15.g_71_1151 (reverse)

seq1  ACTACAAACA-GGGCTGGGA-CTTGG-CAGTGAAGAACAGTTGTTGC-TT  46
      |||||||||| ||| ||||| ||||| |||||| || ||||||| || ||
seq2  ACTACAAACAGGGGGTGGGACCTTGGCCAGTGAGGACCAGTTGTGGCTTT  50

seq1  TTGCAGAGGACCCAGGCTTGGTTCCCTACAGCCACATGGTGGATC-ACAA  95
      ||||||||||| || |  |||||||||||||||| | || ||||| ||||
seq2  TTGCAGAGGACACAAGTCTGGTTCCCTACAGCCA-AAGGGGGATCAACAA  99

seq1  CTGTCTTCAATTCTAGTTCTAGGGATCAGATGCCCAATTCTGACCTGCAT  145
      |||||||| |||||||||||| |||||||||||||||||||  |||||||
seq2  CTGTCTTC-ATTCTAGTTCTA-GGATCAGATGCCCAATTCTAGCCTGCAT  147

seq1  GTATACCACACAAGCACATGATGTACATAAATACAAACAATTATTTATTA  195
      |||||||   | ||||||||||||||| |||||||||| |||||||||||
seq2  GTATACCCACCCAGCACATGATGTACAAAAATACAAAC-ATTATTTATTA  196

seq1  ATTTATTTATTTTTGTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTAG  245
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTTTG-TTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTAG  245

seq1  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC  295
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  CTGTCCTGAAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATA  295

seq1  TGCCTGCCT-CTGCCTCCCGAGTGCTGGGACTAAAGGCGTGCGCCACCAC  344
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTCCTGCCTCCCGAGTGCTGGGACTAAAGGCGTGCGCCACCAC  345

seq1  CCCGGCTCACATAAAATAATTTTAAAGAAAAGCAACTACCACCAAC-AAA  393
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCGGCTCACATAAAATAATTTTAAAGAAAAGCAACTACCACCAACAAAA  395

seq1  AAACATGTTTCATGAT-CCTGCCT-AATATAGCAGCCTTAATGATCTGAA  441
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  AAACATGTTTCATGATCCCTGCCTAAATATAGCAGCCTTAATGATCTGAA  445

seq1  TCTTAAAAGCCAACAGTAATGCTCAGATTGCAT-CCAATAATAAGCATGC  490
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTAAAAGCCAACAGTAATGCTCAGATTGCATCCCAATAATAAGCATGC  495

seq1  TTTTATGTTTTATATTCTGTGCTCTGGTAAAATTTATCTTTTAATATTTC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTTTTATATTCTGTGCTCTGGTAAAATTTATCTTTTAATATTTC  545

seq1  TCATTTGGAAGAGTTTGATTTTAGACTTAGTTTTTAGTTGTTTGGTAGTA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGAAGAGTTTGATTTTAGACTTAGTTTTTAGTTGTTTGGTAGTA  595

seq1  TTATTAGGTTTGTTTGCATTAGACATTTGTGTCCTTTGACTGTAATAGCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGTTTGTTTGCATTAGACATTTGTGTCCTTTGACTGTAATAGCT  645

seq1  TTAGAAGACTACCTGAGAAAAGTTGCAAATGTTTCTATTTATTACTTTAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGACTACCTGAGAAAAGTTGCAAATGTTTCTATTTATTACTTTAA  695

seq1  GAAAATTTCAGGAAATTTTTTGGGGCAGGTACAATGATAGCACTTAATCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCAGGAAATTTTTTGGGGCAGGTACAATGATAGCACTTAATCA  745

seq1  CTGGCAGGATTTTTGTGTTAGTCTACTAATTTATTTTTACGATGATCTTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGGATTTTTGTGTTAGTCTACTAATTTATTTTTACGATGATCTTT  795

seq1  ATTGCTCTTTTAAAAATATATGTATTTTACATTTTGTGTGTAAGTCGGGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTTTTAAAAATATATGTATTTTACATTTTGTGTGTAAGTCGGGA  845

seq1  ATCTGCTTCCATTTTTTTACTTTATCGGTTCTGGGGATCATAGTCAGTTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTCCATTTTTTTACTTTATCGGTTCTGGGGATCATAGTCAGTTA  895

seq1  ATCAGGTTTGTTATCAGACTCTTAACATCTGAGCCATCTCTCCAGTCCAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTTTGTTATCAGACTCTTAACATCTGAGCCATCTCTCCAGTCCAT  945

seq1  AGTGTTTGTTTTAGCCCTTTTTATATTGGCATTTTATTAATTTTACTGGG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGTTTTAGCCCTTTTTATATTGGCATTTTATTAATTTTACTGGG  995

seq1  AGAGAAAGCTGAAGAGGCTGTGTCCATGAATATGTATACCCAGGCTGTGC  1040
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGAAAGCTGAAGAGGCTGTGTCCATGAATAAGTATACCCAGGCTGTGC  1045

seq1  CAGTGAGCTACAAAGAAATAAAGACAATTGAGAATTC  1077
      |||||||||||||||||||||||||  || |||||||
seq2  CAGTGAGCTACAAAGAAATAAAGAC-TTTTAGAATTC  1081