BAC Information

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BAC

Clone NameB6Ng01-065K22
Chromosome4 (Build37)
Map Location 37,914,383 - 37,979,364
singlet/doubletdoublet
Overlap geneLOC277771
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC100039448, LOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065K22.bB6Ng01-065K22.g
ACCDH885085DH885086
length1,1231,071
definitionDH885085|Mus musculus domesticus DNA, BAC clone: B6Ng01-065K22, 5' end.DH885086|Mus musculus domesticus DNA, BAC clone: B6Ng01-065K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,978,222 - 37,979,364)(37,914,383 - 37,915,470)
sequence
gaattccttgttattacatggagtacacacagaaacacatctccatcttt
ttttgttgttgttgttttttggttttcttttttttgtaatcgctagctgt
atattacacaacctatttcacattcttgctttttatacccactagaagtt
aagattgatcataacagatgtctctttgttttgttttccactctgtattc
catgtagtgatcaaaactgtcataatacaatacagtaaatatctctcagt
taaattattatacataatgagtttcctgaataacaaaggagaaaatagat
gctcattacttcttaacttgtccagaatcacataaacacgtagtattaga
gttataatttaaatccaaattcatgttaacctataatttaagttttattt
ttaaaccaataactgtcccaaccagcattttattattcctattgaatctc
catatttcaatactgaatataattgtagaaagtattatgtaggctggtga
catacaagacaactgtacaccattgtaccactgttactgtatgacacaat
gctactcatttaattttttaatatatcagattatattgaaattatgtgtg
tgtgtgtgtatacgatttcaaaatctgttttaaataaagcagtttggagt
caccaaccagcccaaatttctatgtctataactgttaacacaacagaaat
aaaatgtgcttcatactaattattccatcctgccagaagctcttctctga
tgctcctttactttgcacttacaacacactcaagctgttgaaagaaaaca
gaggaacagatgtaaaggagctgcagttcttcatagaattctaaatggca
cacagactcctttgcaacagcacataaaaacttgtgatcattaagaggcc
ttgaaagaaagacaaagagctcacaaacatttagaatcccacaaaccatt
tcatctttgtcagaatttaatttaaacactttgacattcattattcactg
tagaaattctcagagtcaatcatctgctgccaagctaattaccaatagag
agaataactggtggttcttcctagaatagccatatgataaaaaattcttc
tgcagcatcatgtactatacaca
gaattctttccagagtggatgtaccagtttgcaatcccaccaacaatgca
ggagtgttcctctttctccacatcctcatcaggatctgctgtcacctgag
tttttattctcagccattctgaatggtatgaggtggaatctcagggttat
tttgattttcatttccctgatgactaaggatgttgaacatttctgtaggt
gcttctcaaccatttattgaatcatacatatttttctttttgttaccata
caagctaagtgtgccttccatagttttgtgaggtcccagtcaatgtgaag
ttctaatggttttcatatttatacaaattgaagaagatgccaattttccc
tttatctactgtataaattttcagcatcatttcttcaatatcaatgatgt
caataataattagtctcatcttttcatttctttgaatttggctaatgagg
ctgtagtaacagaaacagcacttgtaatatagtaatttttcaaaacttct
tttattaaaagggaaaggtacaattttcaaagccatgtggctttactgtt
actttttaagaacagaaataatccaaaggtgtccttactctgatttttct
tcctactactcataagatgttgtaagcatttttcttacttttaataataa
ataatataaattaaaaattattgaatcactaattatatgatccagaaatt
gcatgaaatatattttctttatcttaagataaattatttcgaaaagcagg
atgaacaaaaagttttaaccattcctgacatcatttagttgcagaaaatt
catgacaggaaaggcatattttacaaaaaggtattttacatttaaaaatt
tctcttgcagaataaagttctatgtaagaggtttctgcactaaaaatttt
attgtaataaattgtttccttaaactttaggatgccagcaacattgtaat
attattttttatttttttattatttttactttcagtaataagagcatttt
tataaagagactacctgagccaccaagagagattctatagatagacccgc
tattcagctgaggattatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37978222_37979364
seq2: B6Ng01-065K22.b_49_1171 (reverse)

seq1  TGTGTATAGTACATGATGCCTGCAGGAAGAAATTTTTTATCATTATGGGG  50
      |||||||||||||||||| ||||| |||| |||||||||||| |||  ||
seq2  TGTGTATAGTACATGATG-CTGCA-GAAG-AATTTTTTATCA-TAT--GG  44

seq1  CTATCTTAGGAAGAAACCACTCAGGTTTATGTCTCTCTATTTGGTAATTT  100
      ||||  ||||||| |||||| |||  |||| |||||||| ||||||| ||
seq2  CTATTCTAGGAAG-AACCAC-CAG--TTAT-TCTCTCTA-TTGGTAA-TT  87

seq1  AGCTTTGGCAGCAGATGATGTGACTCTGAGAATGTCTACAGTGAATAATT  150
      ||| ||||||||||||||| ||||||||||||| |||||||||||||| |
seq2  AGC-TTGGCAGCAGATGAT-TGACTCTGAGAATTTCTACAGTGAATAA-T  134

seq1  GAATGTCAAAAGTGTTTTAAATTAAATTCTGACAAAGATGAAATGGTTTG  200
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  GAATGTC-AAAGTG-TTTAAATTAAATTCTGACAAAGATGAAATGGTTTG  182

seq1  TGGGGATTCTAAATGTTTGTTGAGCTCTTTGTCTTTCTTTCAAGGCCTCT  250
      | ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  T-GGGATTCTAAATGTTTG-TGAGCTCTTTGTCTTTCTTTCAAGGCCTCT  230

seq1  TAATGATCACAAGTTTTTATGTGCTGTTGC-AAGGAGTCTGTGTGCCATT  299
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAATGATCACAAGTTTTTATGTGCTGTTGCAAAGGAGTCTGTGTGCCATT  280

seq1  TAGAATTCTATGGAGGAACTGCAGCTCCTTTACATCTGTTCTTCTGTTTT  349
      ||||||||||| || |||||||||||||||||||||||||| ||||||||
seq2  TAGAATTCTAT-GAAGAACTGCAGCTCCTTTACATCTGTTCCTCTGTTTT  329

seq1  CTTTCAACAGCTTGAGTGTGTTGTAAGTGCAAAGTAAAGGAGCATCAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACAGCTTGAGTGTGTTGTAAGTGCAAAGTAAAGGAGCATCAGAG  379

seq1  AAGAGCTTCTGGCAGGATGGAATAATTAGTATGAAGCACATTTTATTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTCTGGCAGGATGGAATAATTAGTATGAAGCACATTTTATTTCT  429

seq1  GTTGTGTTAACAGTTATAGACATAGAAATTTGGGCTGGTTGGTGACTCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTAACAGTTATAGACATAGAAATTTGGGCTGGTTGGTGACTCCA  479

seq1  AACTGCTTTATTTAAAACAGATTTTGAAATCGTATACACACACACACACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTTATTTAAAACAGATTTTGAAATCGTATACACACACACACACA  529

seq1  TAATTTCAATATAATCTGATATATTAAAAAATTAAATGAGTAGCATTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCAATATAATCTGATATATTAAAAAATTAAATGAGTAGCATTGTG  579

seq1  TCATACAGTAACAGTGGTACAATGGTGTACAGTTGTCTTGTATGTCACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAGTAACAGTGGTACAATGGTGTACAGTTGTCTTGTATGTCACCA  629

seq1  GCCTACATAATACTTTCTACAATTATATTCAGTATTGAAATATGGAGATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACATAATACTTTCTACAATTATATTCAGTATTGAAATATGGAGATT  679

seq1  CAATAGGAATAATAAAATGCTGGTTGGGACAGTTATTGGTTTAAAAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGAATAATAAAATGCTGGTTGGGACAGTTATTGGTTTAAAAATAA  729

seq1  AACTTAAATTATAGGTTAACATGAATTTGGATTTAAATTATAACTCTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATTATAGGTTAACATGAATTTGGATTTAAATTATAACTCTAAT  779

seq1  ACTACGTGTTTATGTGATTCTGGACAAGTTAAGAAGTAATGAGCATCTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGTGTTTATGTGATTCTGGACAAGTTAAGAAGTAATGAGCATCTAT  829

seq1  TTTCTCCTTTGTTATTCAGGAAACTCATTATGTATAATAATTTAACTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTTGTTATTCAGGAAACTCATTATGTATAATAATTTAACTGAG  879

seq1  AGATATTTACTGTATTGTATTATGACAGTTTTGATCACTACATGGAATAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTACTGTATTGTATTATGACAGTTTTGATCACTACATGGAATAC  929

seq1  AGAGTGGAAAACAAAACAAAGAGACATCTGTTATGATCAATCTTAACTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGAAAACAAAACAAAGAGACATCTGTTATGATCAATCTTAACTTC  979

seq1  TAGTGGGTATAAAAAGCAAGAATGTGAAATAGGTTGTGTAATATACAGCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGGTATAAAAAGCAAGAATGTGAAATAGGTTGTGTAATATACAGCT  1029

seq1  AGCGATTACAAAAAAAAGAAAACCAAAAAACAACAACAACAAAAAAAGAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATTACAAAAAAAAGAAAACCAAAAAACAACAACAACAAAAAAAGAT  1079

seq1  GGAGATGTGTTTCTGTGTGTACTCCATGTAATAACAAGGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGTGTTTCTGTGTGTACTCCATGTAATAACAAGGAATTC  1123

seq1: chr4_37914383_37915470
seq2: B6Ng01-065K22.g_69_1139

seq1  GAATTCTTTCCAGAGTGGATGTACCAGTTTGCAATCCCACCAACAATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGAGTGGATGTACCAGTTTGCAATCCCACCAACAATGCA  50

seq1  GGAGTGTTCCTCTTTCTCCACATCCTCATCAGGATCTGCTGTCACCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTTCCTCTTTCTCCACATCCTCATCAGGATCTGCTGTCACCTGAG  100

seq1  TTTTTATTCTCAGCCATTCTGAATGGTATGAGGTGGAATCTCAGGGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTCTCAGCCATTCTGAATGGTATGAGGTGGAATCTCAGGGTTAT  150

seq1  TTTGATTTTCATTTCCCTGATGACTAAGGATGTTGAACATTTCTGTAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTCATTTCCCTGATGACTAAGGATGTTGAACATTTCTGTAGGT  200

seq1  GCTTCTCAACCATTTATTGAATCATACATATTTTTCTTTTTGTTACCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCAACCATTTATTGAATCATACATATTTTTCTTTTTGTTACCATA  250

seq1  CAAGCTAAGTGTGCCTTCCATAGTTTTGTGAGGTCCCAGTCAATGTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAAGTGTGCCTTCCATAGTTTTGTGAGGTCCCAGTCAATGTGAAG  300

seq1  TTCTAATGGTTTTCATATTTATACAAATTGAAGAAGATGCCAATTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATGGTTTTCATATTTATACAAATTGAAGAAGATGCCAATTTTCCC  350

seq1  TTTATCTACTGTATAAATTTTCAGCATCATTTCTTCAATATCAATGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTACTGTATAAATTTTCAGCATCATTTCTTCAATATCAATGATGT  400

seq1  CAATAATAATTAGTCTCATCTTTTCATTTCTTTGAATTTGGCTAATGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAATTAGTCTCATCTTTTCATTTCTTTGAATTTGGCTAATGAGG  450

seq1  CTGTAGTAACAGAAACAGCACTTGTAATATAGTAATTTTTCAAAACTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAACAGAAACAGCACTTGTAATATAGTAATTTTTCAAAACTTCT  500

seq1  TTTATTAAAAGGGAAAGGTACAATTTTCAAAGCCATGTGGCTTTACTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAAAGGGAAAGGTACAATTTTCAAAGCCATGTGGCTTTACTGTT  550

seq1  ACTTTTTAAGAACAGAAATAATCCAAAGGTGTCCTTACTCTGATTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAAGAACAGAAATAATCCAAAGGTGTCCTTACTCTGATTTTTCT  600

seq1  TCCTACTACTCATAAGATGTTGTAAGCATTTTTCTTACTTTTAATAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTACTCATAAGATGTTGTAAGCATTTTTCTTACTTTTAATAATAA  650

seq1  ATAATATAAATTAAAAATTATTGAATCACTAATTATATGATCCAGAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAAATTAAAAATTATTGAATCACTAATTATATGATCCAGAAATT  700

seq1  GCATGAAATATATTTTCTTTATCTTAAGATAAATTATTTCGAAAAGCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAATATATTTTCTTTATCTTAAGATAAATTATTTCGAAAAGCAGG  750

seq1  ATGAACAAAAAGTTTTAACCATTCCTGACATCATTTAGTTGCAGAAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAAAAAGTTTTAACCATTCCTGACATCATTTAGTTGCAGAAAATT  800

seq1  CATGACAGGAAAGGCATATTTTACAAAAAGGTATTTTACAATTAAAAATT  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATGACAGGAAAGGCATATTTTACAAAAAGGTATTTTACATTTAAAAATT  850

seq1  TCTCTTGCAGAATAAAGTTCTATGTAAGAGGTTTCTGCACTAAAAATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCAGAATAAAGTTCTATGTAAGAGGTTTCTGCACTAAAAATTTT  900

seq1  ATTTGTAATAAATTGTTTCCTTAAACTTTAAGGATGCCAGCAACATTGTA  950
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  A-TTGTAATAAATTGTTTCCTTAAACTTT-AGGATGCCAGCAACATTGTA  948

seq1  ATTATTATTTTTTATTTTTTTATTATTTTTACTTTCAGTAAATAAGAGGC  1000
      | ||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  A-TATTATTTTTTATTTTTTTATTATTTTTACTTTCAGT-AATAAGA-GC  995

seq1  ATTTTTATTAAAAGAAGACTAACCTGAGCCAACAAAGAGAGAATTCTATA  1050
      ||||||||  |||| ||||| ||||||||| || ||||||| ||||||||
seq2  ATTTTTAT--AAAG-AGACT-ACCTGAGCC-ACCAAGAGAG-ATTCTATA  1039

seq1  GATAAGACCCCGGCTATTTCAAGCTAGAGGATTATATG  1088
      ||| ||||||  ||||||   |||| ||||||||||||
seq2  GAT-AGACCC--GCTATT--CAGCT-GAGGATTATATG  1071