BAC Information

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BAC

Clone NameB6Ng01-065P07
Chromosome4 (Build37)
Map Location 12,855,517 - 12,856,561
singlet/doubletsinglet
Overlap geneOTTMUSG00000004461
Upstream genePpm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneLOC100039988, Runx1t1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P07.bB6Ng01-065P07.g
ACCDH885279DH885280
length1211,037
definitionDH885279|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P07, 5' end.DH885280|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acaactggaagaattttgaatggctgagaagtgcctaaagaaatgttcaa
agtccttagtgatcagagaaatgcaaatcatgtggagacaggaggtgggg
aggaggtatggaatgtggagc
gaattctttcagttccactcctttgcctgtagatttcaggatgtgctttt
taaacagctgagtaatagtgcattgtgtaaagcacatgcttattaaagga
caaggctgggcagacactgtgtcttgcgatatcactataggagtgacagc
ataaaaagattgaaataaaatatacttatgaactatactaatagaactgg
tttcatgggagggagcctttattcgatgagacccagtttgtatttcctga
tgactaatattataatataatttggctttagtattaaaattattttctaa
gcatcacttttgtttttaaatgtgtaaattacttttcccttttttattga
attcagaaaacattttgaattcctgtgcttgcagcttctcatttttgaac
attagctattgttattctgttagtttactgaggcaaatagcaaactattg
ataatctcttttgcaaatatcccatacagcccagcgcagatgtcagacat
ttgcctttttggtagattggatcatcactgacctgactagcgatggagac
tttctcatatttacttggacttttaaatttctataactgactctttgacc
aagatttaatatgttgatgggactggatcagtcccacaaggataatatcc
atcttttaacatcatctgatgtgggaacttcattggagcttgatgtgcct
tgtgctatttacacatagcataaccacagaatctcctcatagctacggga
tttacccatgtacaaagtgaggatgaggaggcaattaaactacacataat
atagacaacacataacagtaaatttttaaggagaaaatcgtttacttaaa
tttttattttaaaaatttttctacatgaatattgtattatattacttcca
ttcctttcccctcccctcaacttctctcctgtaccccaagccccatcaat
ctatgacttatttattattgttatatgttaataatcataatccatctata
atatataacaatatatttatactgatatatacgatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12855517_12856561
seq2: B6Ng01-065P07.g_73_1109

seq1  GAATTCTTTCAGTTCCACTCCTTTGCCTGTAGATTTCAGGATGTGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTTCCACTCCTTTGCCTGTAGATTTCAGGATGTGCTTTT  50

seq1  TAAACAGCTGAGTAATAGTGCATTGTGTAAAGCACATGCTTATTAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGCTGAGTAATAGTGCATTGTGTAAAGCACATGCTTATTAAAGGA  100

seq1  CAAGGCTGGGCAGACACTGTGTCTTGCGATATCACTATAGGAGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGGGCAGACACTGTGTCTTGCGATATCACTATAGGAGTGACAGC  150

seq1  ATAAAAAGATTGAAATAAAATATACTTATGAACTATACTAATAGAACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGATTGAAATAAAATATACTTATGAACTATACTAATAGAACTGG  200

seq1  TTTCATGGGAGGGAGCCTTTATTCGATGAGACCCAGTTTGTATTTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGGAGGGAGCCTTTATTCGATGAGACCCAGTTTGTATTTCCTGA  250

seq1  TGACTAATATTATAATATAATTTGGCTTTAGTATTAAAATTATTTTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATATTATAATATAATTTGGCTTTAGTATTAAAATTATTTTCTAA  300

seq1  GCATCACTTTTGTTTTTAAATGTGTAAATTACTTTTCCCTTTTTTATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACTTTTGTTTTTAAATGTGTAAATTACTTTTCCCTTTTTTATTGA  350

seq1  ATTCAGAAAACATTTTGAATTCCTGTGCTTGCAGCTTCTCATTTTTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAAACATTTTGAATTCCTGTGCTTGCAGCTTCTCATTTTTGAAC  400

seq1  ATTAGCTATTGTTATTCTGTTAGTTTACTGAGGCAAATAGCAAACTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTATTGTTATTCTGTTAGTTTACTGAGGCAAATAGCAAACTATTG  450

seq1  ATAATCTCTTTTGCAAATATCCCATACAGCCCAGCGCAGATGTCAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTCTTTTGCAAATATCCCATACAGCCCAGCGCAGATGTCAGACAT  500

seq1  TTGCCTTTTTGGTAGATTGGATCATCACTGACCTGACTAGCGATGGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTTTGGTAGATTGGATCATCACTGACCTGACTAGCGATGGAGAC  550

seq1  TTTCTCATATTTACTTGGACTTTTAAATTTCTATAACTGACTCTTTGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATATTTACTTGGACTTTTAAATTTCTATAACTGACTCTTTGACC  600

seq1  AAGATTTAATATGTTGATGGGACTGGATCAGTCCCACAAGGATAATATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAATATGTTGATGGGACTGGATCAGTCCCACAAGGATAATATCC  650

seq1  ATCTTTTAACATCATCTGATGTGGGAACTTCATTGGAGCTTGATGTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAACATCATCTGATGTGGGAACTTCATTGGAGCTTGATGTGCCT  700

seq1  TGTGCTATTTACACATAGCATAACCACAGAATCTCCTCATAGCTACGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATTTACACATAGCATAACCACAGAATCTCCTCATAGCTACGGGA  750

seq1  TTTACCCATGTACAAAGTGAGGATGAGGAGGCAATTAAACTACACATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCATGTACAAAGTGAGGATGAGGAGGCAATTAAACTACACATAAT  800

seq1  ATAGACAACACATAACAGTAAATTTTTAAGGAGAAAATCGTTTACTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAACACATAACAGTAAATTTTTAAGGAGAAAATCGTTTACTTAAA  850

seq1  TTTTTAATTTTAAAAATTTTTCTACATGAATATTGTATTTATATTACTTC  900
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTT-ATTTTAAAAATTTTTCTACATGAATATTGTA-TTATATTACTTC  898

seq1  CATTCCTTTTCCCCTCCCCTCAACTTCTCTCCTGTACCCCAAGCCCCATT  950
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  CATTCC-TTTCCCCTCCCCTCAACTTCTCTCCTGTACCCCAAGCCCCAT-  946

seq1  CAAATCTATGACTTATTTATTATTGTTATATGTTATATATCATAATCCAT  1000
        |||||||||||||||||||||||||||||||||   ||||||||||||
seq2  -CAATCTATGACTTATTTATTATTGTTATATGTTAATAATCATAATCCAT  995

seq1  CTATAATATATAACAAATATATTTTATACTGTATATATACAATGC  1045
      |||||||||||||| |||||| ||||||||| |||||||| ||||
seq2  CTATAATATATAAC-AATATA-TTTATACTG-ATATATACGATGC  1037