BAC Information

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BAC

Clone NameB6Ng01-066M18
Chromosome4 (Build37)
Map Location 150,656,248 - 150,786,664
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneLOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066M18.bB6Ng01-066M18.g
ACCDH885873DH885874
length885836
definitionDH885873|Mus musculus domesticus DNA, BAC clone: B6Ng01-066M18, 5' end.DH885874|Mus musculus domesticus DNA, BAC clone: B6Ng01-066M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,656,248 - 150,657,132)(150,785,827 - 150,786,664)
sequence
gaattcctcgaggccaacttttgtctggcgctttgagaagcatagccaca
cagttccccctttgctcaaaagaagattaggatattacggacaggatgtc
agctcaagattacacaagcaggataattagacaaaagcctgcattataag
ccatctagccgggaaattaagccgctttggctttctcctcgcctttgaag
ggtattctgtaagggaggtggggcgtgagttgttgggtgtgatagataaa
gatagtaaccaaaccgtagaacccattgttctgcctttacatgaaagaca
attgcttagccaagctgacagcacacaccgtggagccacaaactcctctt
cagaccctcggattaagagactgacacgttgtggataataagactaatta
ataattcccatctccaagggaccgcagccctggcagcttcattctgtctc
tgccttccagctcgcctgggcagcccagtccttgctgaaggacagaggag
agcaagcacgccaggataagggacacggagcaaaggaggctcagggatgt
gaggggacaggagaccagttgatggatagaaggatgtagaggctccagct
cacgtgacaatgggagaaatccttgcccaaggctgtgggacaagcttgac
tctgggcctatgatggaacagtgacatctaaaagactttacattttgctt
gtggagagacagtctcttaggggctgcctctgacacttacccaccgaatc
tactggggtaaaagcccctggcagtggtcaacggtcagcctaccaagcag
gacaccaggatcttgcaggtctgacgtctatcctcagaatgagaataaat
gtctgtacacacacacacagacacacacacacaca
gaattccctgggaagtcctgggagggggacggcgagctatggggctgagg
gcaagggtgggctcctcctgagatacacaggataagagtcaagacagaat
ggtgcctggtgcagcagctaggctgtaccccagcctcaggctcccccaga
gatgcctggtatggcctctcacaggtgacagaactccccaccttccttca
ttctgaagcttctattggtcccactgaagcccctgaggtctcgagaaata
cgtttcctactcttagacataataattatgtcttctggctgaaagttggg
attgcgaggtgacccacagggggccggttggggcagcctccctcctggaa
atctgtccacactggttcctttctccagcttcaagaacacgacttccata
cgcagtaccttgggaaggcactgctccttcatggcacagcagttgcatga
agcagtagcttcctggctttatgtaaaaggtactctgtatgctggaaaac
gtgattgaaagccgcagaccgcgccatctgaaatcatctttgcctctgcg
ccgcagaccgagccacccgcaatctcttgcctttccttttcatgtatgac
tcagttggagctatgccggggggggggagggtccagcctgccccactaat
ccctgctttcgctggaattctcccacttgtttatggtctgggcaatttgc
ctcccgctaccgtgtgactcaaaactatttccaatacccggagcctgcag
ctccccagagtcaacagctggtgtgggtgggtctcatttgccggaatctt
ccacaaagccctccacctccgtctccttcctggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150656248_150657132
seq2: B6Ng01-066M18.b_46_930

seq1  GAATTCCTCGAGGCCAACTTTTGTCTGGCGCTTTGAGAAGCATAGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGAGGCCAACTTTTGTCTGGCGCTTTGAGAAGCATAGCCACA  50

seq1  CAGTTCCCCCTTTGCTCAAAAGAAGATTAGGATATTACGGACAGGATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCCCTTTGCTCAAAAGAAGATTAGGATATTACGGACAGGATGTC  100

seq1  AGCTCAAGATTACACAAGCAGGATAATTAGACAAAAGCCTGCATTATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAGATTACACAAGCAGGATAATTAGACAAAAGCCTGCATTATAAG  150

seq1  CCATCTAGCCGGGAAATTAAGCCGCTTTGGCTTTCTCCTCGCCTTTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAGCCGGGAAATTAAGCCGCTTTGGCTTTCTCCTCGCCTTTGAAG  200

seq1  GGTATTCTGTAAGGGAGGTGGGGCGTGAGTTGTTGGGTGTGATAGATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTGTAAGGGAGGTGGGGCGTGAGTTGTTGGGTGTGATAGATAAA  250

seq1  GATAGTAACCAAACCGTAGAACCCATTGTTCTGCCTTTACATGAAAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAACCAAACCGTAGAACCCATTGTTCTGCCTTTACATGAAAGACA  300

seq1  ATTGCTTAGCCAAGCTGACAGCACACACCGTGGAGCCACAAACTCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAGCCAAGCTGACAGCACACACCGTGGAGCCACAAACTCCTCTT  350

seq1  CAGACCCTCGGATTAAGAGACTGACACGTTGTGGATAATAAGACTAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTCGGATTAAGAGACTGACACGTTGTGGATAATAAGACTAATTA  400

seq1  ATAATTCCCATCTCCAAGGGACCGCAGCCCTGGCAGCTTCATTCTGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCCATCTCCAAGGGACCGCAGCCCTGGCAGCTTCATTCTGTCTC  450

seq1  TGCCTTCCAGCTCGCCTGGGCAGCCCAGTCCTTGCTGAAGGACAGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCAGCTCGCCTGGGCAGCCCAGTCCTTGCTGAAGGACAGAGGAG  500

seq1  AGCAAGCACGCCAGGATAAGGGACACGGAGCAAAGGAGGCTCAGGGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCACGCCAGGATAAGGGACACGGAGCAAAGGAGGCTCAGGGATGT  550

seq1  GAGGGGACAGGAGACCAGTTGATGGATAGAAGGATGTAGAGGCTCCAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGACAGGAGACCAGTTGATGGATAGAAGGATGTAGAGGCTCCAGCT  600

seq1  CACGTGACAATGGGAGAAATCCTTGCCCAAGGCTGTGGGACAAGCTTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGACAATGGGAGAAATCCTTGCCCAAGGCTGTGGGACAAGCTTGAC  650

seq1  TCTGGGCCTATGATGGAACAGTGACATCTAAAAGACTTTACATTTTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCTATGATGGAACAGTGACATCTAAAAGACTTTACATTTTGCTT  700

seq1  GTGGAGAGACAGTCTCTTAGGGGCTGCCTCTGACACTTACCCACCGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAGACAGTCTCTTAGGGGCTGCCTCTGACACTTACCCACCGAATC  750

seq1  TACTGGGGTAAAAG-CCCTGGCAGTGGTCAACGGTCAGCCTACCAAGCAG  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TACTGGGGTAAAAGCCCCTGGCAGTGGTCAACGGTCAGCCTACCAAGCAG  800

seq1  GACACCAGGATCTTTGCAGGTCTGACGTCTATCCTCAGAATGAGAATAAA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GACACCAGGATC-TTGCAGGTCTGACGTCTATCCTCAGAATGAGAATAAA  849

seq1  TGTCTGTACACACACACACAGACACACACACACACA  885
      ||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTACACACACACACAGACACACACACACACA  885

seq1: chr4_150785827_150786664
seq2: B6Ng01-066M18.g_71_906 (reverse)

seq1  CAGCCAGGGAGGAGACGGAGGTGGAGGGCTTTGGTGGAAGATTCCAGGCA  50
      |||||||| ||||||||||||||||||||||| |||||||||||| ||||
seq2  CAGCCAGGAAGGAGACGGAGGTGGAGGGCTTT-GTGGAAGATTCC-GGCA  48

seq1  AATGAGACCCACCCACACCAGCTGTTGACTCTGGGGAGCTGCAGGCTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACCCACCCACACCAGCTGTTGACTCTGGGGAGCTGCAGGCTCCG  98

seq1  GGTATTGGAAATAGTTCTGAGTCACACGGTAGCGGGAGGCAAATTGCCCA  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGTATTGGAAATAGTTTTGAGTCACACGGTAGCGGGAGGCAAATTGCCCA  148

seq1  GACCATAAACAAGTGGGAGAATTCCAGCGAAAGCAGGGATTAGTGGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATAAACAAGTGGGAGAATTCCAGCGAAAGCAGGGATTAGTGGGGCA  198

seq1  GGCTGGACCCTCCCCCCCCCCGGCATAGCTCCAACTGAGTCATACATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGACCCTCCCCCCCCCCGGCATAGCTCCAACTGAGTCATACATGAA  248

seq1  AAGGAAAGGCAAGAGATTGCGGGTGGCTCGGTCTGCGGCGCAGAGGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGCAAGAGATTGCGGGTGGCTCGGTCTGCGGCGCAGAGGCAAA  298

seq1  GATGATTTCAGATGGCGCGGTCTGCGGCTTTCAATCACGTTTTCCAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTCAGATGGCGCGGTCTGCGGCTTTCAATCACGTTTTCCAGCAT  348

seq1  ACAGAGTACCTTTTACATAAAGCCAGGAAGCTACTGCTTCATGCAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTACCTTTTACATAAAGCCAGGAAGCTACTGCTTCATGCAACTGC  398

seq1  TGTGCCATGAAGGAGCAGTGCCTTCCCAAGGTACTGCGTATGGAAGTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCATGAAGGAGCAGTGCCTTCCCAAGGTACTGCGTATGGAAGTCGT  448

seq1  GTTCTTGAAGCTGGAGAAAGGAACCAGTGTGGACAGATTTCCAGGAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGAAGCTGGAGAAAGGAACCAGTGTGGACAGATTTCCAGGAGGGA  498

seq1  GGCTGCCCCAACCGGCCCCCTGTGGGTCACCTCGCAATCCCAACTTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCCCAACCGGCCCCCTGTGGGTCACCTCGCAATCCCAACTTTCAG  548

seq1  CCAGAAGACATAATTATTATGTCTAAGAGTAGGAAACGTATTTCTCGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGACATAATTATTATGTCTAAGAGTAGGAAACGTATTTCTCGAGA  598

seq1  CCTCAGGGGCTTCAGTGGGACCAATAGAAGCTTCAGAATGAAGGAAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGGGCTTCAGTGGGACCAATAGAAGCTTCAGAATGAAGGAAGGTG  648

seq1  GGGAGTTCTGTCACCTGTGAGAGGCCATACCAGGCATCTCTGGGGGAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTCTGTCACCTGTGAGAGGCCATACCAGGCATCTCTGGGGGAGCC  698

seq1  TGAGGCTGGGGTACAGCCTAGCTGCTGCACCAGGCACCATTCTGTCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGGGGTACAGCCTAGCTGCTGCACCAGGCACCATTCTGTCTTGA  748

seq1  CTCTTATCCTGTGTATCTCAGGAGGAGCCCACCCTTGCCCTCAGCCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCCTGTGTATCTCAGGAGGAGCCCACCCTTGCCCTCAGCCCCAT  798

seq1  AGCTCGCCGTCCCCCTCCCAGGACTTCCCAGGGAATTC  838
      ||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGCCGTCCCCCTCCCAGGACTTCCCAGGGAATTC  836