BAC Information

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BAC

Clone NameB6Ng01-067F11
Chromosome4 (Build37)
Map Location 126,554,878 - 126,677,753
singlet/doubletdoublet
Overlap genenone
Upstream geneCsf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320
Downstream geneSfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296, LOC635169
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067F11.bB6Ng01-067F11.g
ACCDH886260DH886261
length1,134323
definitionDH886260|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F11, 5' end.DH886261|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,554,878 - 126,556,028)(126,677,431 - 126,677,753)
sequence
gaattccaaggcacaggtataagatactgtctgggtcatacttttcacca
tttggtctccgcacctcttggataaactggcataagcccaaactcaactc
agaaaaagtgcaggacagaatatcttccttcagtttcacagagcgggctg
tggaaagggagaaaacacatctgaaacattaactttaaaaaacagtgtat
aactactatttactgaatcaacacaagcactagtgtgcccaacactgtat
tgggtcacaaagacactgtaaataggaaagcacacctgtaacctgtgttc
tcaagatgctgaagcaggaggattctgaggtctaggctagcctgggctac
aaagaaaaaccttgtgccgaattaaaaaaaccaatcaaagaacagatcct
gttttaccagtagacaaataaagatggtttactgcatatggtataacagg
tactatgtatggcacaagtcttgtttaactaggactctatgaaagtaaac
aaaagaagttgggtgcaatggtgtgtgcttttaattccagcatgagagga
agaagcaggcagatctcttttgagttagagtccagacttgtgtacacagc
aaattctggacagccagggctacatagtgaagagagagagagagtgaaga
gaggcagagacagacagagacccagagagaaagagtcagacagagactga
catactgagcaaatgttctccctgctgcagcacagtcctaggccatgaaa
attgttattgaatgttctctggagatcttttgcatcttcaaattggtatt
ctttacctgcctgccttttaaatcttcattctttgtggtatagccctgtg
ttgcttccttcagactcttttaactgaacccttccctattagatttctct
ctctcctctgcctctgcctgcctgtctctgtctctctctctgtctctcct
cacccccccccttgaggccagcttcatatataggaaatccagttctatat
gggattggagaaactgggacggggtttgtactagacagaacttctggact
attgctgtttaaagcactgggagatccactgagaagtgctgctacttctc
tttctcgaacttagtatagattattcaataacac
agtgaggcgcaaaggggcgtgtctcctgcattactcagaggttcattcct
accgagtgtcttagggtttttactgctgtggcgagaaacagtgtgaccaa
aggcagcttaaagaggaaaggatttattatgtgacacttccatgtagcag
tgtatcatcaaaagcatttatcttaggaactcaaacaaggacaggaacct
ggaggcaggagttgattcggaggacatccaggtggtgctatttatagctt
gttccttaaggcttgcccagtttttatactttgtttttgttctttttgtt
gttggtggtagtggtttggtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_126554878_126556028
seq2: B6Ng01-067F11.b_47_1180

seq1  GAATTCCAAGGCACAGGTATAAGATACTGTCTGGGTCATACTTTTCACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGCACAGGTATAAGATACTGTCTGGGTCATACTTTTCACCA  50

seq1  TTTGGTCTCCGCACCTCTTGGATAAACTGGCATAAGCCCAAACTCAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTCCGCACCTCTTGGATAAACTGGCATAAGCCCAAACTCAACTC  100

seq1  AGAAAAAGTGCAGGACAGAATATCTTCCTTCAGTTTCACAGAGCGGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGTGCAGGACAGAATATCTTCCTTCAGTTTCACAGAGCGGGCTG  150

seq1  TGGAAAGGGAGAAAACACATCTGAAACATTAACTTTAAAAAACAGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGGGAGAAAACACATCTGAAACATTAACTTTAAAAAACAGTGTAT  200

seq1  AACTACTATTTACTGAATCAACACAAGCACTAGTGTGCCCAACACTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTATTTACTGAATCAACACAAGCACTAGTGTGCCCAACACTGTAT  250

seq1  TGGGTCACAAAGACACTGTAAATAGGAAAGCACACCTGTAACCTGTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCACAAAGACACTGTAAATAGGAAAGCACACCTGTAACCTGTGTTC  300

seq1  TCAAGATGCTGAAGCAGGAGGATTCTGAGGTCTAGGCTAGCCTGGGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGCTGAAGCAGGAGGATTCTGAGGTCTAGGCTAGCCTGGGCTAC  350

seq1  AAAGAAAAACCTTGTGCCGAATTAAAAAAACCAATCAAAGAACAGATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAACCTTGTGCCGAATTAAAAAAACCAATCAAAGAACAGATCCT  400

seq1  GTTTTACCAGTAGACAAATAAAGATGGTTTACTGCATATGGTATAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACCAGTAGACAAATAAAGATGGTTTACTGCATATGGTATAACAGG  450

seq1  TACTATGTATGGCACAAGTCTTGTTTAACTAGGACTCTATGAAAGTAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTATGGCACAAGTCTTGTTTAACTAGGACTCTATGAAAGTAAAC  500

seq1  AAAAGAAGTTGGGTGCAATGGTGTGTGCTTTTAATTCCAGCATGAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGTTGGGTGCAATGGTGTGTGCTTTTAATTCCAGCATGAGAGGA  550

seq1  AGAAGCAGGCAGATCTCTTTTGAGTTAGAGTCCAGACTTGTGTACACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGGCAGATCTCTTTTGAGTTAGAGTCCAGACTTGTGTACACAGC  600

seq1  AAATTCTGGACAGCCAGGGCTACATAGTGAAGAGAGAGAGAGAGTGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGGACAGCCAGGGCTACATAGTGAAGAGAGAGAGAGAGTGAAGA  650

seq1  GAGGCAGAGACAGACAGAGACCCAGAGAGAAAGAGTCAGACAGAGACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGACAGACAGAGACCCAGAGAGAAAGAGTCAGACAGAGACTGA  700

seq1  CATACTGAGCAAATGTTCTCCCTGCTGCAGCACAGTCCTAGGCCATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAGCAAATGTTCTCCCTGCTGCAGCACAGTCCTAGGCCATGAAA  750

seq1  ATTGTTATTGAATGTTCTCTGGAGATCTTTTGCATCTTCAAATTGGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATTGAATGTTCTCTGGAGATCTTTTGCATCTTCAAATTGGTATT  800

seq1  CTTTACCTGCCTGCCTTTTAAATCTTCATTCTTTGTGGTATAGCCCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTGCCTGCCTTTTAAATCTTCATTCTTTGTGGTATAGCCCTGTG  850

seq1  TTGCTTCCTTCAGACTCTTTTAACTGAACCCTTCCCTATTAGATTTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCTTCAGACTCTTTTAACTGAACCCTTCCCTATTAGATTTCTCT  900

seq1  CTCTCCTCTGCCTCTGCCTGCCTGTCTCTGTCTCTCTCTCTGTCTCTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCTGCCTCTGCCTGCCTGTCTCTGTCTCTCTCTCTGTCTCTCCT  950

seq1  CACCCCCCCCCCTTGAGGCCAGCTTCATATATAGGAAATCCAGTTCTATA  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-CCCCCCCCCTTGAGGCCAGCTTCATATATAGGAAATCCAGTTCTATA  999

seq1  TGGGAATTGGAGAAAACTGGGACGGGGTTTGTACTAAGACCAGAACTCCT  1050
      |||| ||||||| |||||||||||||||||||||| ||| ||||||| ||
seq2  TGGG-ATTGGAG-AAACTGGGACGGGGTTTGTACT-AGA-CAGAACTTCT  1045

seq1  GGACCTATTGCTGTATTAAAGGCACTGGGAAGATCCACTGAGGAAGTGCT  1100
      ||| |||||||||| ||||| |||||||| ||||||||||| ||||||||
seq2  GGA-CTATTGCTGT-TTAAA-GCACTGGG-AGATCCACTGA-GAAGTGCT  1090

seq1  GCATAACTTTCTCTTTCTCAGAACTTAGTATAAGATTATTTCAAATAACA  1150
      || ||   ||||||||||| ||||||||||| ||||||||   |||||||
seq2  GC-TA--CTTCTCTTTCTC-GAACTTAGTAT-AGATTATT--CAATAACA  1133

seq1  C  1151
      |
seq2  C  1134

seq1: chr4_126677431_126677753
seq2: B6Ng01-067F11.g_75_397 (reverse)

seq1  CAAACCAAACCACTACCACCAACAACAAAAAGAACAAAAACAAAGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAAACCACTACCACCAACAACAAAAAGAACAAAAACAAAGTATAA  50

seq1  AAACTGGGCAAGCCTTAAGGAACAAGCTATAAATAGCACCACCTGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGCAAGCCTTAAGGAACAAGCTATAAATAGCACCACCTGGATGT  100

seq1  CCTCCGAATCAACTCCTGCCTCCAGGTTCCTGTCCTTGTTTGAGTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGAATCAACTCCTGCCTCCAGGTTCCTGTCCTTGTTTGAGTTCCTA  150

seq1  AGATAAATGCTTTTGATGATACACTGCTACATGGAAGTGTCACATAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATGCTTTTGATGATACACTGCTACATGGAAGTGTCACATAATAA  200

seq1  ATCCTTTCCTCTTTAAGCTGCCTTTGGTCACACTGTTTCTCGCCACAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCTCTTTAAGCTGCCTTTGGTCACACTGTTTCTCGCCACAGCA  250

seq1  GTAAAAACCCTAAGACACTCGGTAGGAATGAACCTCTGAGTAATGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACCCTAAGACACTCGGTAGGAATGAACCTCTGAGTAATGCAGGA  300

seq1  GACACGCCCCTTTGCGCCTCACT  323
      |||||||||||||||||||||||
seq2  GACACGCCCCTTTGCGCCTCACT  323