BAC Information

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BAC

Clone NameB6Ng01-067O14
Chromosome4 (Build37)
Map Location 84,147,721 - 84,248,198
singlet/doubletdoublet
Overlap geneBnc2
Upstream geneLOC100040611, 4930473A06Rik, LOC668010
Downstream geneLOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303, Sh3gl2, A930009N24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O14.bB6Ng01-067O14.g
ACCDH886654DH886655
length1,0901,089
definitionDH886654|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O14, 5' end.DH886655|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,147,721 - 84,148,822)(84,247,088 - 84,248,198)
sequence
gaattcaatacatggctctgatttgggaaacatttccataaactagagaa
catgtggcagacattttatggattattttttaaatgttttaaaaaaatac
cctgatcttattcagggaataaggggccttttcgtttgccaaaaagtgta
ataggaaaacagaaaggccacctgtgtcagcccaccctatagcatgaaca
tgagctataagggcattttagaaactattttcaaactgagatgagaaaca
aaaaacatcagtatcaatacagattctaaacagatgcacaaggcccctgt
gcatgtcagtgattatgtgtgtggcctccccaagcaagttaattccacac
gcctcccaaactccctacactttctctttaacaagctacttgtgattaaa
ctacagcctcctacatagcaacttgaacaatggataaaaacacagggaca
tggagcaaggtgactttttccacacccataattggatttttttgtttttt
aaaattttaaatgactattgcatcctacagaacattcaacacttaacact
tggtatttgtagattaaatgctttcctgggacagcctatagaatagactg
tctttctcagagctgagggacttgggggaagctgtagtggtgacactctt
tgtagcctgcagacaatagtaaactcttagcactcccagagttgcatcag
attttccttggatggagactgaaatgaaagttcgattactaagaggtaga
taagtaaaataaacaactaatttcatacagggagggcgggagggcgtcat
gcggacctcattctgttgtctctgaacactttatctgagggggaaaagga
gctgagtaaactttaaactctcatgtagggatgtattgcttgtgtgtccc
tggcagatgtggaaaggagatgaaatgggcaagggagaatcaaatatccc
ttcgctgcagtttgctgaggaaagagcgctgcaaagacctcccatctggc
atcatttgtcaatagctggaaagagacgcaggaaacttctggctctggag
aaggatgaaagacaaacatctctcttctctctctcctctc
gaattcttgtgagatcagacctttgcaagcagtatgattcactttcaggg
tcagaggtattgagagtgtcagtggaatttgttgatgctccataccttgt
tgtaataacgctctttttagacacatttatgataaatacaagactttttc
tattcttacaaagtgagttttattagttctcttcttgtatttatgtcagt
tttctatagaataagatagtggagttctttgagttttgttttgtttttgt
tttttccgctctgctctcctgcccctcttaccttggaatggttttctaac
tcagtgatcattgtttgttgtacttgatgtgtgtcccaggagattgaact
gggtatgatgctgagcgctactgagcaagatctgtgcagcatccagggat
cagtgctgtgtacccttcctgataaccgtgtttatcttgtacagaaagca
gagagaaacagcattttgaacaacttgatttgtgaagttgctttttgagt
tcaaatcctggctttattgcttactgttggcctatttgtagaagagttat
ttgacttccttattctctggtattcagacagtggtgattataatgctgct
tgccttgtgggtggctacgaggattctgtgagcacattagagagtaatgc
cagttgcattctccgtgtatatttgtattgtagtgtctagttgaatttct
acaagtattgtctaatagtattctctcttggtccattcaaccgatgaaaa
gatattattgactctgtaaaaggcatgtcataaaaacataatagtagcac
ataattttgttactggtatcacagttggaattgtaggacaaatttcttct
catctattatctagatggagttgggtcttctgggacctctctgcttcttt
gatattatagatgtaggagatctcagttctgtttttaaatctgtggtgat
cagtcattcattttaaaagtcctattagtataagtgtgtctctttacatg
actctggcctttactgccatggttaattaacaccagttcctatcagtaag
ctaagtccgaaatcatgttaatgattactcactgtgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_84147721_84148822
seq2: B6Ng01-067O14.b_50_1139

seq1  GAATTCAATACATGGCTCTGATTTGGGAAACATTTCCATAAACTAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACATGGCTCTGATTTGGGAAACATTTCCATAAACTAGAGAA  50

seq1  CATGTGGCAGACATTTTATGGATTATTTTTTAAATGTTTTAAAAAAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGCAGACATTTTATGGATTATTTTTTAAATGTTTTAAAAAAATAC  100

seq1  CCTGATCTTATTCAGGGAATAAGGGGCCTTTTCGTTTGCCAAAAAGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTTATTCAGGGAATAAGGGGCCTTTTCGTTTGCCAAAAAGTGTA  150

seq1  ATAGGAAAACAGAAAGGCCACCTGTGTCAGCCCACCCTATAGCATGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAACAGAAAGGCCACCTGTGTCAGCCCACCCTATAGCATGAACA  200

seq1  TGAGCTATAAGGGCATTTTAGAAACTATTTTCAAACTGAGATGAGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTATAAGGGCATTTTAGAAACTATTTTCAAACTGAGATGAGAAACA  250

seq1  AAAAACATCAGTATCAATACAGATTCTAAACAGATGCACAAGGCCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATCAGTATCAATACAGATTCTAAACAGATGCACAAGGCCCCTGT  300

seq1  GCATGTCAGTGATTATGTGTGTGGCCTCCCCAAGCAAGTTAATTCCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCAGTGATTATGTGTGTGGCCTCCCCAAGCAAGTTAATTCCACAC  350

seq1  GCCTCCCAAACTCCCTACACTTTCTCTTTAACAAGCTACTTGTGATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCAAACTCCCTACACTTTCTCTTTAACAAGCTACTTGTGATTAAA  400

seq1  CTACAGCCTCCTACATAGCAACTTGAACAATGGATAAAAACACAGGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCCTCCTACATAGCAACTTGAACAATGGATAAAAACACAGGGACA  450

seq1  TGGAGCAAGGTGACTTTTTCCACACCCATAATTGGATTTTTTTGTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAAGGTGACTTTTTCCACACCCATAATTGGATTTTTTTGTTTTTT  500

seq1  AAAATTTTAAATGACTATTGCATCCTACAGAACATTCAACACTTAACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAAATGACTATTGCATCCTACAGAACATTCAACACTTAACACT  550

seq1  TGGTATTTGTAGATTAAATGCTTTCCTGGGACAGCCTATAGAATAGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTGTAGATTAAATGCTTTCCTGGGACAGCCTATAGAATAGACTG  600

seq1  TCTTTCTCAGAGCTGAGGGACTTGGGGGAAGCTGTAGTGGTGACACTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCAGAGCTGAGGGACTTGGGGGAAGCTGTAGTGGTGACACTCTT  650

seq1  TGTAGCCTGCAGACAATAGTAAACTCTTAGCACTCCCAGAGTTGCATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTGCAGACAATAGTAAACTCTTAGCACTCCCAGAGTTGCATCAG  700

seq1  ATTTTCCTTGGATGGAGACTGAAATGAAAGTTCGATTACTAAGAGGTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTGGATGGAGACTGAAATGAAAGTTCGATTACTAAGAGGTAGA  750

seq1  TAAGTAAAATAAACAACTAATTTCATACAGGGAGGGCGGGAGGGCGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAAATAAACAACTAATTTCATACAGGGAGGGCGGGAGGGCGTCAT  800

seq1  GCGGACCTCATTCTGTTGTCTCTGAACACTTTATCTGAGGGGGAAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGACCTCATTCTGTTGTCTCTGAACACTTTATCTGAGGGGGAAAAGGA  850

seq1  GCTGAGTAAACTTTAAACTCTCATGTAGGGATGTATTGCTTGTGTGTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTAAACTTTAAACTCTCATGTAGGGATGTATTGCTTGTGTGTCCC  900

seq1  TGGCAGATGTGGAAAGGAGATGAAATGGGCAAGGGAGAATCAAATATCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATGTGGAAAGGAGATGAAATGGGCAAGGGAGAATCAAATATCCC  950

seq1  TTCGCTGCAGGTTTGCTGAGGGAAAGAGCGCTGCAAAGACCTCACATCTG  1000
      ||||||||| ||||||||| ||||||||||||||||||||||| ||||||
seq2  TTCGCTGCA-GTTTGCTGA-GGAAAGAGCGCTGCAAAGACCTCCCATCTG  998

seq1  GCAATCATTTGTCAATAGCTGGAAAGAGAACGGCAGGAAACTTTCTGGCT  1050
      || ||||||||||||||||||||||||||   ||||||||| ||||||||
seq2  GC-ATCATTTGTCAATAGCTGGAAAGAGA--CGCAGGAAAC-TTCTGGCT  1044

seq1  CTTGGAGAA-GATGAAAAGACAAAAACCATCTCTCTCTCTCTCTCTCTCT  1099
      | ||||||| |||| |||||||||   ||||||||| |||||||||| ||
seq2  C-TGGAGAAGGATG-AAAGACAAA---CATCTCTCT-TCTCTCTCTC-CT  1087

seq1  CTC  1102
      |||
seq2  CTC  1090

seq1: chr4_84247088_84248198
seq2: B6Ng01-067O14.g_68_1156 (reverse)

seq1  TAACACAGTGAAGTATAACTCATTAACATGATTTCTGAACTTTAGACTAT  50
      |||||||||| |||   | |||||||||||||||| ||   |||| || |
seq2  TAACACAGTG-AGT---AATCATTAACATGATTTCGGA--CTTAG-CT-T  42

seq1  ACTGATAGGGAACTGGTGTTAATTAACCATGGCAAGTAAAGGCCAGAGTC  100
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTGATA-GGAACTGGTGTTAATTAACCATGGC-AGTAAAGGCCAGAGTC  90

seq1  ATGTAAAAGAAGACACACTTATACTTAATAAGGACTTTTAAAATGAATGA  150
      |||||||   |||||||||||||| |||| ||||||||||||||||||| 
seq2  ATGTAAA--GAGACACACTTATAC-TAAT-AGGACTTTTAAAATGAATG-  135

seq1  ACTGAATCACCACAGATTTAAAAAACAGAACTTGAGAATCTTCCTACATC  200
      |||| |||||||||||||| ||||||||||| |||| ||| |||||||||
seq2  ACTG-ATCACCACAGATTT-AAAAACAGAAC-TGAG-ATC-TCCTACATC  180

seq1  TTATAATATCAAAGAAGCAGAGAGGTCCCAGAAGACCCAACTCCATCTAG  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TATAATATCAAAGAAGCAGAGAGGTCCCAGAAGACCCAACTCCATCTAG  229

seq1  ATTAATAGATGAGAAGAAATTTGTCCTACAATTCCAACTGTGATACCAGT  300
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TAATAGATGAGAAGAAATTTGTCCTACAATTCCAACTGTGATACCAGT  278

seq1  AACAAAATTATGTGCTACTATTATGTTTTTATGACATGCCTTTTACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTATGTGCTACTATTATGTTTTTATGACATGCCTTTTACAGAG  328

seq1  TCAATAATATCTTTTCATCGGTTGAATGGACCAAGAGAGAATACTATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATATCTTTTCATCGGTTGAATGGACCAAGAGAGAATACTATTAG  378

seq1  ACAATACTTGTAGAAATTCAACTAGACACTACAATACAAATATACACGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACTTGTAGAAATTCAACTAGACACTACAATACAAATATACACGGA  428

seq1  GAATGCAACTGGCATTACTCTCTAATGTGCTCACAGAATCCTCGTAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAACTGGCATTACTCTCTAATGTGCTCACAGAATCCTCGTAGCCA  478

seq1  CCCACAAGGCAAGCAGCATTATAATCACCACTGTCTGAATACCAGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAGGCAAGCAGCATTATAATCACCACTGTCTGAATACCAGAGAAT  528

seq1  AAGGAAGTCAAATAACTCTTCTACAAATAGGCCAACAGTAAGCAATAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTCAAATAACTCTTCTACAAATAGGCCAACAGTAAGCAATAAAG  578

seq1  CCAGGATTTGAACTCAAAAAGCAACTTCACAAATCAAGTTGTTCAAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATTTGAACTCAAAAAGCAACTTCACAAATCAAGTTGTTCAAAATG  628

seq1  CTGTTTCTCTCTGCTTTCTGTACAAGATAAACACGGTTATCAGGAAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTCTCTGCTTTCTGTACAAGATAAACACGGTTATCAGGAAGGGT  678

seq1  ACACAGCACTGATCCCTGGATGCTGCACAGATCTTGCTCAGTAGCGCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCACTGATCCCTGGATGCTGCACAGATCTTGCTCAGTAGCGCTCA  728

seq1  GCATCATACCCAGTTCAATCTCCTGGGACACACATCAAGTACAACAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATACCCAGTTCAATCTCCTGGGACACACATCAAGTACAACAAACA  778

seq1  ATGATCACTGAGTTAGAAAACCATTCCAAGGTAAGAGGGGCAGGAGAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCACTGAGTTAGAAAACCATTCCAAGGTAAGAGGGGCAGGAGAGCA  828

seq1  GAGCGGAAAAAACAAAAACAAAACAAAACTCAAAGAACTCCACTATCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGAAAAAACAAAAACAAAACAAAACTCAAAGAACTCCACTATCTTA  878

seq1  TTCTATAGAAAACTGACATAAATACAAGAAGAGAACTAATAAAACTCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGAAAACTGACATAAATACAAGAAGAGAACTAATAAAACTCACT  928

seq1  TTGTAAGAATAGAAAAAGTCTTGTATTTATCATAAATGTGTCTAAAAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGAATAGAAAAAGTCTTGTATTTATCATAAATGTGTCTAAAAAGA  978

seq1  GCGTTATTACAACAAGGTATGGAGCATCAACAAATTCCACTGACACTCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTATTACAACAAGGTATGGAGCATCAACAAATTCCACTGACACTCTC  1028

seq1  AATACCTCTGACCCTGAAAGTGAATCATACTGCTTGCAAAGGTCTGATCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTCTGACCCTGAAAGTGAATCATACTGCTTGCAAAGGTCTGATCT  1078

seq1  CACAAGAATTC  1111
      |||||||||||
seq2  CACAAGAATTC  1089