BAC Information

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BAC

Clone NameB6Ng01-067P01
Chromosome4 (Build37)
Map Location 83,436,544 - 83,572,244
singlet/doubletdoublet
Overlap gene4930473A06Rik
Upstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611
Downstream geneLOC668010, Bnc2, LOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067P01.bB6Ng01-067P01.g
ACCDH886674DH886675
length639908
definitionDH886674|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P01, 5' end.DH886675|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,436,544 - 83,437,181)(83,571,340 - 83,572,244)
sequence
gaattcaagactggcttttgagattatatctatctgtctgtctgtctatc
tatgtatctatctatgtgaccatgtatgtatgtgtgtctgtctgtctgtc
ttttgttgtttgttttttgagacatggtttctgtgtgtctgtctgtgact
atgtatgtatgtgtgtgtttgtgtctgtctgtctttttttgttgtttgtt
tgttttttgagacatggtttctctgtgtgtgtctgtctgtctgtcttttt
tgttgtttgttttttgagacatggtttctctgtgtgtgtgtctgtgtctg
tctgtctgtctttttttgtcatttgtttgtttgttttttgagacatggtt
tctgtgtgtgtctgtctttttttgttgtttgtttgttttttgagacatgg
ttcctctgtgtatccctggttattctggaccagcctaccccagaactcag
taatctcccacctttggctcccaggttctaggatgaaaggcatgcaccac
cactgcccaatttgagattattatttaatccatggacctgtgactgattt
ttatatcccaatttatattaaaacagggactttaaaaagtgaatgccttc
tagaaaaaaatagttctattttttctaattttatttcaa
gaattcctccacgagggaggtgcaggaggaggaaaggggactccaggaac
agcagccaaaggcagaattgggccaactgctggctacctccagctctgta
cccatggtctgcacggactgtgtgtgccaacaggggttctgggctatgca
gaggaagggttgcagagcaaagagctcacggctgcctctcgggcctgctc
tctttatcttggttgttactcccaacacttctgctatacaattctcttga
tggtgagatgttgaggtttcaagaggttctcagaggtacaaagaggtttt
gagagggtccagtgtccctcacatgtatcaaatgacctatgattgggaaa
atatggcagataccgcccatttccttctgtcatctagtctaatctttctg
atggtaaaacgactctctcacacaccctcagaagtacatgcacacccaag
aaggaagaaaatggtgtccagctggaaatagtacttcccagttcccatgc
tgctcagtgccagagtggccaagtgaccaatttccaagcagcgaaagtga
tgtgtgcacattctaggtcagatgttataaaagaaagtagccgtttgtcc
ttcccttgcacaggctggatacagatgtgaaaagcaccctcagataagca
ctctgggctgatggagcaaaatggaagaaagtctgctggctttatggagc
agtgccacctacctgccaggtgccgcaggcctgccaggaaatgctctcca
cagaggaataaacaatctcatctccaaggtggcatttctcagtgtcttca
ggacagcagtttagcctgtgtcctaactaatgcatggtgacttttctgct
gtctcagctaggcaccaaatcttaaaggccgtgctagctcacactaattt
aaaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83436544_83437181
seq2: B6Ng01-067P01.b_44_682

seq1  GAATTCAAGACTGGCTTTTGAGATTATATCTATCTGTCTGTCTGTCTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACTGGCTTTTGAGATTATATCTATCTGTCTGTCTGTCTATC  50

seq1  TATGTATCTATCTATGTGACCATGTATGTATGTGTGTCTGTCTGTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCTATCTATGTGACCATGTATGTATGTGTGTCTGTCTGTCTGTC  100

seq1  TTTTGTTGTTTGTTTTTTGAGACATGGTTTCTGTGTGTCTGTCTGTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTTTGTTTTTTGAGACATGGTTTCTGTGTGTCTGTCTGTGACT  150

seq1  ATGTATGTATGTGTGTGTTTGTGTCTGTCTGTCTTTTTTTGTTGTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTATGTGTGTGTTTGTGTCTGTCTGTCTTTTTTTGTTGTTTGTT  200

seq1  TGTTTTTTGAGACATGGTTTCTCTGTGTGTGTCTGTCTGTCTGTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTGAGACATGGTTTCTCTGTGTGTGTCTGTCTGTCTGTCTTTTT  250

seq1  TGTTGTTTGTTTTTTGAGACATGGTTTCTCTGTGTGTGTGTCTGTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTGTTTTTTGAGACATGGTTTCTCTGTGTGTGTGTCTGTGTCTG  300

seq1  TCTGTCTGTCTTTTTTTGTCATTTGTTTGTTTGTTTTTTGAGACATGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTTTTTTTGTCATTTGTTTGTTTGTTTTTTGAGACATGGTT  350

seq1  TCTGTGTGTGTCTGTCTTTTTTTGTTGTTTGTTTGTTTTTTGAGACATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTGTCTGTCTTTTTTTGTTGTTTGTTTGTTTTTTGAGACATGG  400

seq1  TTCCTCTGTGTATCCCTGGTTATTCTGGACCAGCCTACCCCAGAACTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTGTATCCCTGGTTATTCTGGACCAGCCTACCCCAGAACTCAG  450

seq1  TAATCTCCCACCTTTGGCTCCCAGGTTCTAGGATGAAAGGCATGCACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCCCACCTTTGGCTCCCAGGTTCTAGGATGAAAGGCATGCACCAC  500

seq1  CACTGCCCAATTTGAGATTATTATTTAATCCATGGACCTGTGACTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCCAATTTGAGATTATTATTTAATCCATGGACCTGTGACTGATTT  550

seq1  TTATATCCCAATTTATATTAAAACAGGGACTTTAAAAAGTGAATGCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCCCAATTTATATTAAAACAGGGACTTTAAAAAGTGAATGCCTTC  600

seq1  TAGAAAAAAATAGTTCTA-TTTTTCTAATTTTATTTCAA  638
      |||||||||||||||||| ||||||||||||||||||||
seq2  TAGAAAAAAATAGTTCTATTTTTTCTAATTTTATTTCAA  639

seq1: chr4_83571340_83572244
seq2: B6Ng01-067P01.g_69_976 (reverse)

seq1  TGCTTTTTAAATTAGTGTGAGCTAGCACGGCC-TTAAGATTTGGTGCCTA  49
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCTTTTTAAATTAGTGTGAGCTAGCACGGCCTTTAAGATTTGGTGCCTA  50

seq1  GCTGAGACAGCAG-AAAGTCA-CATGCATTAGTTAGGACACAGGCTAAAC  97
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  GCTGAGACAGCAGAAAAGTCACCATGCATTAGTTAGGACACAGGCTAAAC  100

seq1  TGCTGTCCTGAAGACACTGAGAAATGCCACCTTGGAGATGAGATTGTTTA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCCTGAAGACACTGAGAAATGCCACCTTGGAGATGAGATTGTTTA  150

seq1  TTCCTCTGTGGAGAGCATTTCCTGGCAGGCCTGCGGCACCTGGCAGGTAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTGGAGAGCATTTCCTGGCAGGCCTGCGGCACCTGGCAGGTAG  200

seq1  GTGGCACTGCTCCATAAAGCCAGCAGACTTTCTTCCATTTTGCTCCATCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTGCTCCATAAAGCCAGCAGACTTTCTTCCATTTTGCTCCATCA  250

seq1  GCCCAGAGTGCTTATCTGAGGGTGCTTTTCACATCTGTATCCAGCCTGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAGTGCTTATCTGAGGGTGCTTTTCACATCTGTATCCAGCCTGTG  300

seq1  CAAGGGAAGGACAAACGGCTACTTTCTTTTATAACATCTGACCTAGAATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAGGACAAACGGCTACTTTCTTTTATAACATCTGACCTAGAATG  350

seq1  TGCACACATCACTTTCGCTGCTTGGAAATTGGTCACTTGGCCACTCTGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACATCACTTTCGCTGCTTGGAAATTGGTCACTTGGCCACTCTGGC  400

seq1  ACTGAGCAGCATGGGAACTGGGAAGTACTATTTCCAGCTGGACACCATTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCAGCATGGGAACTGGGAAGTACTATTTCCAGCTGGACACCATTT  450

seq1  TCTTCCTTCTTGGGTGTGCATGTACTTCTGAGGGTGTGTGAGAGAGTCGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCTTGGGTGTGCATGTACTTCTGAGGGTGTGTGAGAGAGTCGT  500

seq1  TTTACCATCAGAAAGATTAGACTAGATGACAGAAGGAAATGGGCGGTATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATCAGAAAGATTAGACTAGATGACAGAAGGAAATGGGCGGTATC  550

seq1  TGCCATATTTTCCCAATCATAGGTCATTTGATACATGTGAGGGACACTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATATTTTCCCAATCATAGGTCATTTGATACATGTGAGGGACACTGG  600

seq1  ACCCTCTCAAAACCTCTTTGTACCTCTGAGAACCTCTTGAAACCTCAACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCAAAACCTCTTTGTACCTCTGAGAACCTCTTGAAACCTCAACA  650

seq1  TCTCACCATCAAGAGAATTGTATAGCAGAAGTGTTGGGAGTAACAACCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCATCAAGAGAATTGTATAGCAGAAGTGTTGGGAGTAACAACCAA  700

seq1  GATAAAGAGAGCAGGCCCGAGAGGCAGCCGTGAGCTCTTTGCTCTGCAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGAGAGCAGGCCCGAGAGGCAGCCGTGAGCTCTTTGCTCTGCAAC  750

seq1  CCTTCCTCTGCATAGCCCAGAACCCCTGTTGGCACACACAGTCCGTGCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCTGCATAGCCCAGAACCCCTGTTGGCACACACAGTCCGTGCAG  800

seq1  ACCATGGGTACAGAGCTGGAGGTAGCCAGCAGTTGGCCCAATTCTGCCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGTACAGAGCTGGAGGTAGCCAGCAGTTGGCCCAATTCTGCCTT  850

seq1  TGGCTGCTGTTCCTGGAGTCCCCTTTCCTCCTCCTGCACCTCCCTCGTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGTTCCTGGAGTCCCCTTTCCTCCTCCTGCACCTCCCTCGTGG  900

seq1  AGGAATTC  905
      ||||||||
seq2  AGGAATTC  908