BAC Information

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BAC

Clone NameB6Ng01-068E07
Chromosome4 (Build37)
Map Location 123,010,316 - 123,165,350
singlet/doubletdoublet
Overlap geneBmp8a, Macf1, D830031N03Rik
Upstream geneLOC633269, LOC633279, 9530002B09Rik, Ppt1, Cap1, Mfsd2, Mycl1, Trit1, Bmp8b, Oxct2b, Ppie, Hpcal4, Nt5c1a, Heyl, LOC194197, LOC622334, Pabpc4, Oxct2a
Downstream geneLOC100039110, Ndufs5, 6330407G11Rik, Rhbdl2, LOC667064, Mycbp, Rragc, 1700057H15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068E07.bB6Ng01-068E07.g
ACCDH886906DH886907
length1,0601,071
definitionDH886906|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E07, 5' end.DH886907|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,010,316 - 123,011,379)(123,164,283 - 123,165,350)
sequence
gaattctccacaagcctaatgaccacagcttgaacccagaacccacaatg
gaagaagagaactatctaccaaaagttgtcctctgacctctctgcatgtg
cactgtggcaagtacttatctggactcatgtacacgtaaaaatattttta
attttaaaaataaaatttgaacttgaaaaattaaaaatattttttaaatt
acacctatgagtctgtgtgggagtaagtgcacatgagcgcaggtaccagt
ggatgccacaagagggcatatgatcctctggagctgggcggttgtgatcc
acccagcctaagtggattcaggtcttctacaagagaagcacaagctctta
actgctgagccacccctccagccccaataataaataaaaattttaaatga
aaacaaaacaaaataacagcaacaacaaaacagcattcagcgagataaag
gaagagctgccctaacagagaaatcctaaaatccacagtgcctgtgctgt
gtgtgtgaaccctaaagaagttggcatggctggaatccagtggtacacga
gaagaccacagagtagccgggaaagccaggctgttcacaggacactctgt
tccttacctcaaataactcagcccagcgatcccagacaccctgtacccta
gaaaaaattctattcaggtcaattgttgctgactctatgacagtctgagg
cactcagaggcaagcatgctgacctttggggagtgatgtttgtctagagt
ttccagcaatggggtcgggggagaggttctgtgtacaatcacttatacca
caaacactgagactggagcacggatccccacaatccacatgacagccagg
taggctctatggcttctttgcaatcccagcactcatgagacagagaaaga
tgctctagctagctagacaagctggaactggcaagctctgggccctggga
gagacactgttatacacaggtagagagtgatcgagtgtactgatgtcaac
ttcagatctacacgttacacacaccacaccatctgagagagagaggaaag
agaggagaga
gaattctacacgtattgatgtttgagaaactgggcctatatccttgaaag
attttgatcatataggaacaaggtgatcatatttgtttcttagaaacggt
atcaggagccaggcagtggtaatgcaggtctttaatcccagcactcagga
ggcagaggcaggcagatctctgaatttgaggccagactggtttataaaga
gagtcccaggatgaccaagggtacacagagaaaccttgtctttaggggga
aagatataaggagcatgagagtagaagtagtaagataaataagtgaataa
gggactgtttaaatgaagagagtttggaaggtggggagcaaagcactctg
caggttacaggagaagcacaggatatgaagtaaaatgaggaaaggatttg
aaaacagtttctaatctgtactgatttaggaaaatccactttccctattt
gaacttcagtttctccaagagtgagatcaaagaattagacatcaaatcac
agattaaaaactcagaattcagcaaggtatgatgcacaggctgagtctag
gccacacattctcttttgtatggccattgaaaaaatttaaaagaatcaca
ttagccaggcgtggtagcccacgcctttaatcccagcactcgggaggcag
aggcaggcggatttctgagttcgaggccagcctgggctacagagtgagtt
ccaggacagccatggctacacagagaacccctgtctcgaaagaaaaaaca
agttcttataattaaaaaagcacactggtgatgcagagactgcaccaagc
ctaattgacctatagccaggggctattcagagaaacccttgtctcgagaa
acaaaacaaaacaaaacaaagaatcatatttttatgatacttttttttta
ataaagaataagaactgggcagtggggcagtgttcatttgaccaaacctt
gcctagtatcatataagactgaacttagcaatgaccaactctgatgctag
catttggaagggttagaacaggaggttagacaggaggatcaggtctggtt
tttttggttttttttttttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_123010316_123011379
seq2: B6Ng01-068E07.b_47_1106

seq1  GAATTCTCCACAAGCCTAATGACCACAGCTTGAACCCAGAACCCACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACAAGCCTAATGACCACAGCTTGAACCCAGAACCCACAATG  50

seq1  GAAGAAGAGAACTATCTACCAAAAGTTGTCCTCTGACCTCTCTGCATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGAACTATCTACCAAAAGTTGTCCTCTGACCTCTCTGCATGTG  100

seq1  CACTGTGGCAAGTACTTATCTGGACTCATGTACACGTAAAAATATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGCAAGTACTTATCTGGACTCATGTACACGTAAAAATATTTTTA  150

seq1  ATTTTAAAAATAAAATTTGAACTTGAAAAATTAAAAATATTTTTTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAATAAAATTTGAACTTGAAAAATTAAAAATATTTTTTAAATT  200

seq1  ACACCTATGAGTCTGTGTGGGAGTAAGTGCACATGAGCGCAGGTACCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTATGAGTCTGTGTGGGAGTAAGTGCACATGAGCGCAGGTACCAGT  250

seq1  GGATGCCACAAGAGGGCATATGATCCTCTGGAGCTGGGCGGTTGTGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCACAAGAGGGCATATGATCCTCTGGAGCTGGGCGGTTGTGATCC  300

seq1  ACCCAGCCTAAGTGGATTCAGGTCTTCTACAAGAGAAGCACAAGCTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCCTAAGTGGATTCAGGTCTTCTACAAGAGAAGCACAAGCTCTTA  350

seq1  ACTGCTGAGCCACCCCTCCAGCCCCAATAATAAATAAAAATTTTAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGAGCCACCCCTCCAGCCCCAATAATAAATAAAAATTTTAAATGA  400

seq1  AAACAAAACAAAATAACAGCAACAACAAAACAGCATTCAGCGAGATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAATAACAGCAACAACAAAACAGCATTCAGCGAGATAAAG  450

seq1  GAAGAGCTGCCCTAACAGAGAAATCCTAAAATCCACAGTGCCTGTGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCTGCCCTAACAGAGAAATCCTAAAATCCACAGTGCCTGTGCTGT  500

seq1  GTGTGTGAACCCTAAAGAAGTTGGCATGGCTGGAATCCAGTGGTACACGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGAACCCTAAAGAAGTTGGCATGGCTGGAATCCAGTGGTACACGA  550

seq1  GAAGACCACAGAGTAGCCGGGAAAGCCAGGCTGTTCACAGGACACTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCACAGAGTAGCCGGGAAAGCCAGGCTGTTCACAGGACACTCTGT  600

seq1  TCCTTACCTCAAATAACTCAGCCCAGCGATCCCAGACACCCTGTACCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACCTCAAATAACTCAGCCCAGCGATCCCAGACACCCTGTACCCTA  650

seq1  GAAAAAATTCTATTCAGGTCAATTGTTGCTGACTCTATGACAGTCTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATTCTATTCAGGTCAATTGTTGCTGACTCTATGACAGTCTGAGG  700

seq1  CACTCAGAGGCAAGCATGCTGACCTTTGGGGAGTGATGTTTGTCTAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAGGCAAGCATGCTGACCTTTGGGGAGTGATGTTTGTCTAGAGT  750

seq1  TTCCAGCAATGGGGTCGGGGGAGAGGTTCTGTGTACAATCACTTATACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCAATGGGGTCGGGGGAGAGGTTCTGTGTACAATCACTTATACCA  800

seq1  CAAACACTGAGACTGGAGCACGGATCCCCACAATCCACATGACAGCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTGAGACTGGAGCACGGATCCCCACAATCCACATGACAGCCAGG  850

seq1  TAGGCTCTATGGCTTC-TTGCAATCCCAGCACTCATGAGACAGAGAAAGG  899
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  TAGGCTCTATGGCTTCTTTGCAATCCCAGCACTCATGAGACAGAGAAA-G  899

seq1  ATGCTCTAGCTAGCTAGACAAGCTGGAACTGGCAAGCTCTGGGCCCTGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTAGCTAGCTAGACAAGCTGGAACTGGCAAGCTCTGGGCCCTGGG  949

seq1  AGAGACACTGTTAATACACAAGGTAGAGAGTGATCGAAGAAGGTACTGAT  999
      |||||||||||| |||||| |||||||||||||||   ||  ||||||||
seq2  AGAGACACTGTT-ATACAC-AGGTAGAGAGTGATC---GAGTGTACTGAT  994

seq1  GTCAACTTCAGATCTACACGTTACACACACACACACACACAGAGAGAGAG  1049
      |||||||||||||||||||||||||||||| |||||   | |||||||||
seq2  GTCAACTTCAGATCTACACGTTACACACAC-CACACCATCTGAGAGAGAG  1043

seq1  A-GAGAGAGA-GAGAGA  1064
      | || ||||| ||||||
seq2  AGGAAAGAGAGGAGAGA  1060

seq1: chr4_123164283_123165350
seq2: B6Ng01-068E07.g_70_1140 (reverse)

seq1  AGAAAAAAAAAAAACAAAAAAAACCAGACCTTGATCCTCCTGTCTAACCT  50
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  AGAAAAAAAAAAAACCAAAAAAACCAGACC-TGATCCTCCTGTCTAACCT  49

seq1  CCTG-TCTAACCCTTCCAAATGCTAGCATCAGAGTTGTGCATTGCTAAGT  99
      |||| ||||||||||||||||||||||||||||||||  |||||||||||
seq2  CCTGTTCTAACCCTTCCAAATGCTAGCATCAGAGTTGGTCATTGCTAAGT  99

seq1  TCAGTCTTATATGATACTAGGCAAGGTTTTGGTCAAATGAACACTG-CCC  148
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  TCAGTCTTATATGATACTAGGCAAGG-TTTGGTCAAATGAACACTGCCCC  148

seq1  ACTGCCCAGTTCTTATTCTTTTATTAAAAAAAAGTATCAT-AAAATATGA  197
      |||||||||||||||||||||  | ||||||||||||||| |||||||||
seq2  ACTGCCCAGTTCTTATTCTTTATTAAAAAAAAAGTATCATAAAAATATGA  198

seq1  TTCTTTTGTTTTGTTTTGTTTTGTTTCTCGAGAC-AGGGTTTCTCTGAAT  246
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTC-TTTGTTTTGTTTTGTTTTGTTTCTCGAGACAAGGGTTTCTCTGAAT  247

seq1  AG-CCCTGGCTATAGGTC-ATTAGGCTTGGTGCAGTCTCTGCATCACCAG  294
      || ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGCCCCTGGCTATAGGTCAATTAGGCTTGGTGCAGTCTCTGCATCACCAG  297

seq1  TGTGCTTTTTTAATTATAAGAACTTGTTTTTTCTTTTGAGACAGGGGTTC  344
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTGCTTTTTTAATTATAAGAACTTGTTTTTTCTTTCGAGACAGGGGTTC  347

seq1  TCTGTGTAGCCATGGCTGTCCTGGAACTCACTCTGTAGCCCAGGCTGGCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCCATGGCTGTCCTGGAACTCACTCTGTAGCCCAGGCTGGCC  397

seq1  TCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAG  447

seq1  GCGTGGGCTACCACGCCTGGCTAATGTGATTCTTTTAAATTTTTTCAATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGCTACCACGCCTGGCTAATGTGATTCTTTTAAATTTTTTCAATG  497

seq1  GCCATACAAAAGAGAATGTGTGGCCTAGACTCAGCCTGTGCATCATACCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAAAAGAGAATGTGTGGCCTAGACTCAGCCTGTGCATCATACCT  547

seq1  TGCTGAATTCTGAGTTTTTAATCTGTGATTTGATGTCTAATTCTTTGATC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATTCTGAGTTTTTAATCTGTGATTTGATGTCTAATTCTTTGATC  597

seq1  TCACTCTTGGAGAAACTGAAGTTCAAATAGGGAAAGTGGATTTTCCTAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTGGAGAAACTGAAGTTCAAATAGGGAAAGTGGATTTTCCTAAA  647

seq1  TCAGTACAGATTAGAAACTGTTTTCAAATCCTTTCCTCATTTTACTTCAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACAGATTAGAAACTGTTTTCAAATCCTTTCCTCATTTTACTTCAT  697

seq1  ATCCTGTGCTTCTCCTGTAACCTGCAGAGTGCTTTGCTCCCCACCTTCCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGCTTCTCCTGTAACCTGCAGAGTGCTTTGCTCCCCACCTTCCA  747

seq1  AACTCTCTTCATTTAAACAGTCCCTTATTCACTTATTTATCTTACTACTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTTCATTTAAACAGTCCCTTATTCACTTATTTATCTTACTACTT  797

seq1  CTACTCTCATGCTCCTTATATCTTTCCCCCTAAAGACAAGGTTTCTCTGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTCATGCTCCTTATATCTTTCCCCCTAAAGACAAGGTTTCTCTGT  847

seq1  GTACCCTTGGTCATCCTGGGACTCTCTTTATAAACCAGTCTGGCCTCAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTTGGTCATCCTGGGACTCTCTTTATAAACCAGTCTGGCCTCAAA  897

seq1  TTCAGAGATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGACCTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGACCTG  947

seq1  CATTACCACTGCCTGGCTCCTGATACCGTTTCTAAGAAACAAATATGATC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCACTGCCTGGCTCCTGATACCGTTTCTAAGAAACAAATATGATC  997

seq1  ACCTTGTTCCTATATGATCAAAATCTTTCAAGGATATAGGCCCAGTTTCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTCCTATATGATCAAAATCTTTCAAGGATATAGGCCCAGTTTCT  1047

seq1  CAAACATCAATACGTGTAGAATTC  1068
      ||||||||||||||||||||||||
seq2  CAAACATCAATACGTGTAGAATTC  1071