BAC Information

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BAC

Clone NameB6Ng01-068K14
Chromosome4 (Build37)
Map Location 109,780,945 - 109,954,013
singlet/doubletdoublet
Overlap geneElavl4
Upstream geneOsbpl9, Calr4, Eps15, LOC666144, 4922503N01Rik, Rnf11, 4930522H14Rik, Cdkn2c, LOC100040307, Faf1, Dmrta2
Downstream geneLOC100040381
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068K14.bB6Ng01-068K14.g
ACCDH887183DH887184
length8421,073
definitionDH887183|Mus musculus domesticus DNA, BAC clone: B6Ng01-068K14, 5' end.DH887184|Mus musculus domesticus DNA, BAC clone: B6Ng01-068K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,780,945 - 109,781,789)(109,952,921 - 109,954,013)
sequence
gaattctcagcttttctagcctgactcctacctgccaccccttctctcat
gtctcctggcctttctcttgctgtccactctcctatgagctggttctgcc
ccatgtagtgttgaaactccaagccctaagcaaagtaccctcacaccaaa
cccactcatgctggtattccctcttcattgggcttccataatagtctaca
tggagctcttttttataacacttgtctcattggatgaccgctgtcctttc
ctatctttctctggcctcagctcctctctgggcagtgaacatctgcagga
caacttggggtttctttgttcacacttccacgtctaacaactggactagt
tgctagttgtcaaaaatccccaaacatttttgcatttattaaatagtttt
cttactttctcccctataccactggcttcctgtggagctaaacgtgagta
cgccaagcctactttgggggttagtggcttggtcaaggctgttggttatt
ttctaagatttttttttcctcataggaaaagggttctgcctctctcatct
agctgacaaatgcctcacaccctccctaggtctttacaccaagcttatga
tctcagtggctctagaaactgggacataaactgaaactttccccacaaat
gcccaaatctgagaatgagttaaattccaatctgttccagagtctagctc
ggggcagatgtccagtcttttagatcttccgccaaatgctatagatggga
aggttggatgctgccctcagagatgaacatatgctgtatgtctcataggt
gggccttgtcccattggggatcaaagtcataatgaagagaca
gaattcattaaataataaactacatttttggtgctcttatcaggctagtg
cctcgctctcccacccctcccaggtctctcttctcccctctttctcccct
aacccggagattctgcctccaccatttttgctttgaactagtcttacgga
gatccttgtagttaacacctgagattagcactcacacacacacacgcaca
cgcacacgcacatgcaccagtaaaaattgtctcaagactcaagaaatgct
gagattaatcaaagaatctttaaattaatttcagttaagaaatcagtaaa
aatattgaagaaatattgttagtacattgtgtttacatcttcgttgctga
tgctattgttaaaggatacttgtttttaaccccagaagtagttaaataca
aaactaacatatggggttttgctagtgaaaaaaaaaattacatgacttag
gtgtcccctgaaaatgacttttggtggactcttgatttgaaaaatagcat
ttattgagtttaagttttcaactataaaaacaaaatagatatttgttttc
tataggaaatgtgattgcttttccggatagaaggaggcaaagagtgaatt
ccagtctagacaacaaactcagagaccaccacatcttgcaggcctcctct
gcctgcgctgtgggcgcatgggaccctgtcttgcccgtgtgcttctgtaa
acccactttctttgttccccctcttgtaacaagcagcttttgggtttgct
ttgccatcagggtacagcagagctgatagccattgcttgttccatgaaga
tgtgtttgctgaggacttcttatgtacatgctttgtaattcaaggttgcc
acttctttcaacttttttcaatgatcaaaaaacacaattagagactgttt
ctatgactagggataaagatgagtgagaggttttaagagcctctcgccat
tgtactgtgcaaagtgtgagcaatttcatcagaactcagttgagcatagt
gtggttcttggatgagtctctatgactcaaacgacgaaattgagatcttc
taaacatttttgtcataaggttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_109780945_109781789
seq2: B6Ng01-068K14.b_44_885

seq1  GAATTCTCAGCTTTTCTAGCCTGACTCCTACCTGCCACCCCTTCTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTTTTCTAGCCTGACTCCTACCTGCCACCCCTTCTCTCAT  50

seq1  GTCTCCTGGCCTTTCTCTTGCTGTCCACTCTCCTATGAGCTGGTTCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGGCCTTTCTCTTGCTGTCCACTCTCCTATGAGCTGGTTCTGCC  100

seq1  CCATGTAGTGTTGAAACTCCAAGCCCTAAGCAAAGTACCCTCACACCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGTGTTGAAACTCCAAGCCCTAAGCAAAGTACCCTCACACCAAA  150

seq1  CCCACTCATGCTGGTATTCCCTCTTCATTGGGCTTCCAGAATAGTCTACA  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCACTCATGCTGGTATTCCCTCTTCATTGGGCTTCCATAATAGTCTACA  200

seq1  TGGAGCTCTTTTTTATAACACTTGTCTCATTGGATGACCGCTGTCCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTCTTTTTTATAACACTTGTCTCATTGGATGACCGCTGTCCTTTC  250

seq1  CTATCTTTCTCTGGCCTCAGCTCCTCTCTGGGCAGTGAACATCTGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTTCTCTGGCCTCAGCTCCTCTCTGGGCAGTGAACATCTGCAGGA  300

seq1  CAACTTGGGGTTTCTTTGTTCACACTTCCACGTCTAACAACTGGACTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGGGGTTTCTTTGTTCACACTTCCACGTCTAACAACTGGACTAGT  350

seq1  TGCTAGTTGTCAAAAATCCCCAAACATTTTTGCATTTATTAAATAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTTGTCAAAAATCCCCAAACATTTTTGCATTTATTAAATAGTTTT  400

seq1  CTTACTTTCTCCCCTATACCACTGGCTTCCTGTGGAGCTAAACGTGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTCTCCCCTATACCACTGGCTTCCTGTGGAGCTAAACGTGAGTA  450

seq1  CGCCAGGCCTACTTTGTGGGTTAGTGGCTTGGTCAAGGCTGTTGGTAATT  500
      ||||| |||||||||| ||||||||||||||||||||||||||||| |||
seq2  CGCCAAGCCTACTTTGGGGGTTAGTGGCTTGGTCAAGGCTGTTGGTTATT  500

seq1  TTCTAAGATTTTTTTTTCCTCATAGGAAATGGGTTCTGCCTCTCTCATCT  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTAAGATTTTTTTTTCCTCATAGGAAAAGGGTTCTGCCTCTCTCATCT  550

seq1  AGCTGACAAATGCCTCAGACCCTCCCTAGGTCTTTACACCAAGCTTATGA  600
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCTGACAAATGCCTCACACCCTCCCTAGGTCTTTACACCAAGCTTATGA  600

seq1  TCTCAGTGGCTCTAGAAACTGGGACAGAAACTGAAACTTTCCCCACAAAT  650
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTCAGTGGCTCTAGAAACTGGGACATAAACTGAAACTTTCCCCACAAAT  650

seq1  GCCCAAATCTGAGAATGAGTTAAATTCCAATCTGTTCCAAGAGTCTAGCT  700
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCCCAAATCTGAGAATGAGTTAAATTCCAATCTGTTCC-AGAGTCTAGCT  699

seq1  CAGGGGCAGATGCCCAGGC-TTTAGATCTCAGGCCATAGGCTATGGATGG  749
      | |||||||||| |||| | |||||||||   |||| | ||||| |||||
seq2  C-GGGGCAGATGTCCAGTCTTTTAGATCTTCCGCCAAATGCTATAGATGG  748

seq1  GAAGGCTTGGCAGCTGCCCTCAGAGATGGAACATATGCTGTAGGTCTCAT  799
      ||||| ||||  ||||||||||||||| |||||||||||||| |||||||
seq2  GAAGG-TTGGATGCTGCCCTCAGAGAT-GAACATATGCTGTATGTCTCAT  796

seq1  TGGTGGCCCATGTCCCTCTGGGGATCACAGTCTAGATGGAGAGACA  845
       ||||| || ||||||  ||||||||| ||||   ||| |||||||
seq2  AGGTGGGCCTTGTCCCATTGGGGATCAAAGTCATAATGAAGAGACA  842

seq1: chr4_109952921_109954013
seq2: B6Ng01-068K14.g_66_1138 (reverse)

seq1  GAACCTTACTGACAAAAATGTCTAGAAGATCTTTAATTTCTGTCTTTTGG  50
      |||||||| |||||||||||| ||||||||| | |||||| ||| ||| |
seq2  GAACCTTA-TGACAAAAATGTTTAGAAGATC-TCAATTTC-GTCGTTT-G  46

seq1  AGTCATTTAGAGACTCATACAAAGGAAACACCACTGATGCTCAACTTGAA  100
      |||||  ||||||||||| |||  ||| || |||| ||||||||| ||| 
seq2  AGTCA--TAGAGACTCATCCAA--GAACCA-CACT-ATGCTCAAC-TGA-  88

seq1  GTTTCTGATGAAAATTTGCTCACACTTTGACACAGTGACATTGGGCGAGA  150
        |||||||||||  |||||||||||||| |||||| ||| | |||||||
seq2  -GTTCTGATGAAA--TTGCTCACACTTTG-CACAGT-ACAAT-GGCGAGA  132

seq1  GGCTTCTTAAAACCTCTCACCTCATCTTTATCCCTAGTCATAGAAACAGT  200
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGC-TCTTAAAACCTCTCA-CTCATCTTTATCCCTAGTCATAGAAACAGT  180

seq1  CTCTAATTGTGTTTTTTGATCATTGAAAAAAGTTGAAAGAAGTGGCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTGTGTTTTTTGATCATTGAAAAAAGTTGAAAGAAGTGGCAACC  230

seq1  TTGAATTACAAAGAATGTACATAAGAAGTCCTCAGCAAACACATCTTCAT  300
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTGAATTACAAAGCATGTACATAAGAAGTCCTCAGCAAACACATCTTCAT  280

seq1  GGAACAAGCAATGGCCATCAGCTCTGCTGTACCCTGATGGCAAAGCAAAC  350
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAACAAGCAATGGCTATCAGCTCTGCTGTACCCTGATGGCAAAGCAAAC  330

seq1  CCAAAAGCTGCTTGTTACAAGAGGGGGAACAAAGAAAGTGGGTTTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGCTGCTTGTTACAAGAGGGGGAACAAAGAAAGTGGGTTTACAGA  380

seq1  AGCACACGGGCAAGACAGGGTCCCATGCGCCCACAGCGCAGGCAGAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACGGGCAAGACAGGGTCCCATGCGCCCACAGCGCAGGCAGAGGAG  430

seq1  GCCTGCAAGATGTGGTGGTCTCTGAGTTTGTTGTCTAGACTGGAATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAAGATGTGGTGGTCTCTGAGTTTGTTGTCTAGACTGGAATTCAC  480

seq1  TCTTTGCCTCCTTCTATCCGGAAAAGCAATCACATTTCCTATAGAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCTCCTTCTATCCGGAAAAGCAATCACATTTCCTATAGAAAACA  530

seq1  AATATCTATTTTGTTTTTATAGTTGAAAACTTAAACTCAATAAATGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTATTTTGTTTTTATAGTTGAAAACTTAAACTCAATAAATGCTAT  580

seq1  TTTTCAAATCAAGAGTCCACCAAAAGTCATTTTCAGGGGACACCTAAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATCAAGAGTCCACCAAAAGTCATTTTCAGGGGACACCTAAGTC  630

seq1  ATGTAATTTTTTTTTTCACTAGCAAAACCCCATATGTTAGTTTTGTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTTTTTTTTTCACTAGCAAAACCCCATATGTTAGTTTTGTATTT  680

seq1  AACTACTTCTGGGGTTAAAAACAAGTATCCTTTAACAATAGCATCAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTTCTGGGGTTAAAAACAAGTATCCTTTAACAATAGCATCAGCAA  730

seq1  CGAAGATGTAAACACAATGTACTAACAATATTTCTTCAATATTTTTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGATGTAAACACAATGTACTAACAATATTTCTTCAATATTTTTACTG  780

seq1  ATTTCTTAACTGAAATTAATTTAAAGATTCTTTGATTAATCTCAGCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAACTGAAATTAATTTAAAGATTCTTTGATTAATCTCAGCATTT  830

seq1  CTTGAGTCTTGAGACAATTTTTACTGGTGCATGTGCGTGTGCGTGTGCGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTCTTGAGACAATTTTTACTGGTGCATGTGCGTGTGCGTGTGCGT  880

seq1  GTGTGTGTGTGAGTGCTAATCTCAGGTGTTAACTACAAGGATCTCCGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGAGTGCTAATCTCAGGTGTTAACTACAAGGATCTCCGTAA  930

seq1  GACTAGTTCAAAGCAAAAATGGTGGAGGCAGAATCTCCGGGTTAGGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTTCAAAGCAAAAATGGTGGAGGCAGAATCTCCGGGTTAGGGGAG  980

seq1  AAAGAGGGGAGAAGAGAGACCTGGGAGGGGTGGGAGAGCGAGGCACTAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGGGAGAAGAGAGACCTGGGAGGGGTGGGAGAGCGAGGCACTAGC  1030

seq1  CTGATAAGAGCACCAAAAATGTAGTTTATTTTTTAATGAATTC  1093
      |||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGATAAGAGCACCAAAAATGTAGTTTATTATTTAATGAATTC  1073