BAC Information

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BAC

Clone NameB6Ng01-068P05
Chromosome4 (Build37)
Map Location 32,608,081 - 32,739,196
singlet/doubletdoublet
Overlap geneBach2, Gja10, Casp8ap2
Upstream geneMap3k7, LOC665218, LOC665228, LOC665232
Downstream geneMdn1, Lyrm2, Ankrd6, LOC665298, Rragd, 4933421O10Rik, Ube2j1, LOC100039142, Gabrr2, Gabrr1, Acy1l2, Srrp, Pnrc1, Rngtt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068P05.bB6Ng01-068P05.g
ACCDH887397DH887398
length1,114915
definitionDH887397|Mus musculus domesticus DNA, BAC clone: B6Ng01-068P05, 5' end.DH887398|Mus musculus domesticus DNA, BAC clone: B6Ng01-068P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,738,069 - 32,739,196)(32,608,081 - 32,608,989)
sequence
gaattcaccacataaactaggctggcctcatatttgtagcaattctactg
tctctgccttctgagtgcctggatattagatgtacctatatggccctcaa
gaaaatcattccccaaatttacattcccttcacagagaataggaatcata
ttttcaaagaacattaacataaaataaataggtcctcttttgtttgtttg
tttgttaactttccggagatctgtcttatgtagcacacacaggctggctg
taaacttgttatgtagctagatctatcgcctagccttcctgcctctgcct
ttccagggtatcaggcctgcaagcatgcgctacagggtgtggctctttcc
tttctctacgtagttgtttacagaggatctcatcatgtgaccccgaggga
ggctggggttacacatgcagcacaagcccagctgaggttaactccttgtt
ataaaaatccatttcatttacattagtgttgtgttctctatgtatgtttg
tgtgagggtgtcagattcccccaaagctggaattatagacagttgtgcac
tgttgtgtgggtgctagaatttgaagtgggtcctttggaagagcagtcag
tgctcttaactactaagccatctcttcagaccctgaggttaatttcttaa
agacaactgccatcacttatactattgcttaaagttctttagaataagtt
agtccttcaaattgtctattatttttaagtcctagattctaaattataca
aatagaaaataaatttcacaataaactactaagtaccttttgaagatctc
actagcaaatcaattgctttacaaggacacggatattaaaaggtcagaca
tagtagggattagatgattagtaactcaaaattatttagatcccttatat
aagatctatattcaaatatgacttttaaaaagatttatttattatacata
ggtacactgtagctgtcttcagaagagagcaccagatcccattacagata
gtgtgagtcaccatgtggtgctgggatttgaactcaggaccttcggagag
cagtcagtgtctgccactgagccatctcgccgccccaatatgacttaaga
actttacattgttt
gaattcttcaggaatggctgaagttctacagactggtgtgcttagaatag
agacttgacaacaagggcccgtaggaggtgctcatggcagacacggtggc
ctttgaaccctccgcctggagagccttgtttctgcagctgtgttttatta
ggtacagtgtcaggctgccacggtgaaaaagttctagaaatctgaaaatc
ttgacgtcagattaaaggcttctgaagccaagtgtggtagtaaacacacg
taattccaacacttataagactgaagtatcgtgtcacaagctctgggtca
gctaataagaaaaggggcttcttgttggcgggggattatttgttgtttgt
tgttgtttgctgctgctattttagtaaatcacgattgtctagccatccta
gcattttcccatgccctgtcttagagagctgatggccagcttcagtccta
atgtggccatctatgatcaaaggccagcgtcaacataaggtcctttctct
gccaactgaaatatggggccgtggctgatcgtctgtttcagttttgttta
gagtttgcattcaagcccatcatttagacctggaagaactatgtagaaat
cccagtccagggcaagggcaagctgttggctcagaacaaataactaaaca
ggagctagagtcggagacatccagacaggggagatctttaggatccagaa
acatccctgggaccttttacctcatatagaaccgtgttctcataagtcct
gcccttttcttcgttgcacttgtgggatatcagcacgcatttttaaactg
tgttttagacggtgcccttcaccctccctcacttgctcaccaccctcccc
ttctgcttacagttagatctgggtttcttttcctgttgctgtcaaagatt
tcagtatcgcctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_32738069_32739196
seq2: B6Ng01-068P05.b_46_1159 (reverse)

seq1  AAACACATGTAAAGATCTTAAGAGTCATATTTGGGGCTGGCGAGATGGCT  50
      ||||| |||||||| |||||  ||||||| ||||||| ||||||||||||
seq2  AAACA-ATGTAAAGTTCTTA--AGTCATA-TTGGGGC-GGCGAGATGGCT  45

seq1  CAGTGGCTAAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCC  100
      |||||||  ||| |||||||||||| ||||||||||||||||||||||||
seq2  CAGTGGC--AGA-CACTGACTGCTC-TCCGAAGGTCCTGAGTTCAAATCC  91

seq1  CAGCAACCACATGGTGACTCACAACTATCTGTAATGGGATCTGGTGCTCT  150
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGC-ACCACATGGTGACTCAC-ACTATCTGTAATGGGATCTGGTGCTCT  139

seq1  CTTCTGAAGACAGCTACAGTGTACTTATGTATAATAAATAAATCTTTTTT  200
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  CTTCTGAAGACAGCTACAGTGTACCTATGTATAATAAATAAATCTTTTT-  188

seq1  AAAAAGTCATATTTGAATATAGATCTTATATGAAGGGATCTAAATAATTT  250
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  -AAAAGTCATATTTGAATATAGATCTTATAT-AAGGGATCTAAATAATTT  236

seq1  TGAGTTACTAATCATCTAATCCCTACTATGTCTGACCTTTTAATATCCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACTAATCATCTAATCCCTACTATGTCTGACCTTTTAATATCCGT  286

seq1  GTCCTTGTAAAGCAATTGATTTGCTAGTGAGATCTTCAAAAGGTACTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGTAAAGCAATTGATTTGCTAGTGAGATCTTCAAAAGGTACTTAG  336

seq1  TAGTTTATTGTGAAATTTATTTTCTATTTGTATAATTTAGAATCTAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTATTGTGAAATTTATTTTCTATTTGTATAATTTAGAATCTAGGAC  386

seq1  TTAAAAATAATAGACAATTTGAAGGACTAACTTATTCTAAAGAACTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAATAGACAATTTGAAGGACTAACTTATTCTAAAGAACTTTAA  436

seq1  GCAATAGTATAAGTGATGGCAGTTGTCTTTAAGAAATTAACCTCAGGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAGTATAAGTGATGGCAGTTGTCTTTAAGAAATTAACCTCAGGGTC  486

seq1  TGAAGAGATGGCTTAGTAGTTAAGAGCACTGACTGCTCTTCCAAAGGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGATGGCTTAGTAGTTAAGAGCACTGACTGCTCTTCCAAAGGACC  536

seq1  CACTTCAAATTCTAGCACCCACACAACAGTGCACAACTGTCTATAATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAATTCTAGCACCCACACAACAGTGCACAACTGTCTATAATTCC  586

seq1  AGCTTTGGGGGAATCTGACACCCTCACACAAACATACATAGAGAACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGGGGAATCTGACACCCTCACACAAACATACATAGAGAACACAA  636

seq1  CACTAATGTAAATGAAATGGATTTTTATAACAAGGAGTTAACCTCAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGTAAATGAAATGGATTTTTATAACAAGGAGTTAACCTCAGCTG  686

seq1  GGCTTGTGCTGCATGTGTAACCCCAGCCTCCCTCGGGGTCACATGATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTGCTGCATGTGTAACCCCAGCCTCCCTCGGGGTCACATGATGAG  736

seq1  ATCCTCTGTAAACAACTACGTAGAGAAAGGAAAGAGCCACACCCTGTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGTAAACAACTACGTAGAGAAAGGAAAGAGCCACACCCTGTAGC  786

seq1  GCATGCTTGCAGGCCTGATACCCTGGAAAGGCAGAGGCAGGAAGGCTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTGCAGGCCTGATACCCTGGAAAGGCAGAGGCAGGAAGGCTAGG  836

seq1  CGATAGATCTAGCTACATAACAAGTTTACAGCCAGCCTGTGTGTGCTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAGATCTAGCTACATAACAAGTTTACAGCCAGCCTGTGTGTGCTACA  886

seq1  TAAGACAGATCTCCGGAAAGTTAACAAACAAACAAACAAAAGAGGACCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGATCTCCGGAAAGTTAACAAACAAACAAACAAAAGAGGACCTA  936

seq1  TTTATTTTATGTTAATGTTCTTTGAAAATATGATTCCTATTCTCTGTGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATGTTAATGTTCTTTGAAAATATGATTCCTATTCTCTGTGAA  986

seq1  GGGAATGTAAATTTGGGGAATGATTTTCTTGAGGGCCATATAGGTACATC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGTAAATTTGGGGAATGATTTTCTTGAGGGCCATATAGGTACATC  1036

seq1  TAATATCCAGGCACTCAGAAGGCAGAGACAGTAGAATTGCTACAAATATG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCCAGGCACTCAGAAGGCAGAGACAGTAGAATTGCTACAAATATG  1086

seq1  AGGCCAGCCTAGTTTATGTGGTGAATTC  1128
      ||||||||||||||||||||||||||||
seq2  AGGCCAGCCTAGTTTATGTGGTGAATTC  1114

seq1: chr4_32608081_32608989
seq2: B6Ng01-068P05.g_69_982

seq1  GAATTCTTCAGGAATGGCTGAAGTTCTACAGACTGGTGTGCTTAGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGAATGGCTGAAGTTCTACAGACTGGTGTGCTTAGAATAG  50

seq1  AGACTTGACAACAAGGGCCCGTAGGAGGTGCTCATGGCAGACACGGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGACAACAAGGGCCCGTAGGAGGTGCTCATGGCAGACACGGTGGC  100

seq1  CTTTGAACCCTCCGCCTGGAGAGCCTTGTTTCTGCAGCTGTGTTTTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACCCTCCGCCTGGAGAGCCTTGTTTCTGCAGCTGTGTTTTATTA  150

seq1  GGTACAGTGTCAGGCTGCCACGGTGAAAAAGTTCTAGAAATCTGAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGTGTCAGGCTGCCACGGTGAAAAAGTTCTAGAAATCTGAAAATC  200

seq1  TTGACGTCAGATTAAAGGCTTCTGAAGCCAAGTGTGGTAGTAAACACACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACGTCAGATTAAAGGCTTCTGAAGCCAAGTGTGGTAGTAAACACACG  250

seq1  TAATTCCAACACTTATAAGACTGAAGTATCGTGTCACAAGCTCTGGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAACACTTATAAGACTGAAGTATCGTGTCACAAGCTCTGGGTCA  300

seq1  GCTAATAAGAAAAGGGGCTTCTTGTTGGCGGGGGATTATTTGTTGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATAAGAAAAGGGGCTTCTTGTTGGCGGGGGATTATTTGTTGTTTGT  350

seq1  TGTTGTTTGCTGCTGCTATTTTAGTAAATCACGATTGTCTAGCCATCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTGCTGCTGCTATTTTAGTAAATCACGATTGTCTAGCCATCCTA  400

seq1  GCATTTTCCCATGCCCTGTCTTAGAGAGCTGATGGCCAGCTTCAGTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCCCATGCCCTGTCTTAGAGAGCTGATGGCCAGCTTCAGTCCTA  450

seq1  ATGTGGCCATCTATGATCAAAGGCCAGCGTCAACATAAGGTCCTTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCCATCTATGATCAAAGGCCAGCGTCAACATAAGGTCCTTTCTCT  500

seq1  GCCAACTGAAATATGGGGCCGTGGCTGATCGTCTGTTTCAGTTTTGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTGAAATATGGGGCCGTGGCTGATCGTCTGTTTCAGTTTTGTTTA  550

seq1  GAGTTTGCATTCAAGCCCATCATTTAGACCTGGAAGAACTATGTAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGCATTCAAGCCCATCATTTAGACCTGGAAGAACTATGTAGAAAT  600

seq1  CCCAGTCCAGGGCAAGGGCAAGCTGTTGGCTCAGAACAAATAACTAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCAGGGCAAGGGCAAGCTGTTGGCTCAGAACAAATAACTAAACA  650

seq1  GGAGCTAGAGTCGGAGACATCCAGACA-GGGAGATC-TTAGGATCCAGAA  698
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  GGAGCTAGAGTCGGAGACATCCAGACAGGGGAGATCTTTAGGATCCAGAA  700

seq1  ACATCCCTGGGACC-TTTACCTCATATAGAACCGTGTTCTCATAAGTCCT  747
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACATCCCTGGGACCTTTTACCTCATATAGAACCGTGTTCTCATAAGTCCT  750

seq1  GCCC-TTTCTTCGTTGCACTTGTGGGATATCAGCACGCATTTTTAAACTG  796
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTTCTTCGTTGCACTTGTGGGATATCAGCACGCATTTTTAAACTG  800

seq1  TGTTTTAGACGGTGCCCTTCACCCTCCCTCACTTGCTCACCACCCTCCCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGACGGTGCCCTTCACCCTCCCTCACTTGCTCACCACCCTCCCC  850

seq1  TTCTGCTTACAGTTAGATCT-GGTTTCTTTTCCTGTTGCTGTCAAAGATT  895
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCTGCTTACAGTTAGATCTGGGTTTCTTTTCCTGTTGCTGTCAAAGATT  900

seq1  TCAGTATCGCCTGG  909
      ||||||||||||||
seq2  TCAGTATCGCCTGG  914