BAC Information

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BAC

Clone NameB6Ng01-069K16
Chromosome4 (Build37)
Map Location 4,625,321 - 4,626,484
singlet/doubletsinglet
Overlap genenone
Upstream geneLyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
Downstream geneImpad1, LOC100039338, 1700012H17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069K16.bB6Ng01-069K16.g
ACCDH887907DH887908
length1,1661,176
definitionDH887907|Mus musculus domesticus DNA, BAC clone: B6Ng01-069K16, 5' end.DH887908|Mus musculus domesticus DNA, BAC clone: B6Ng01-069K16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcttttattgtatacatttttttctataactcataccctgggg
ttgtaatacctgcacaagtacagaaagttggtgattagcaaaaggaaaaa
ttacgtgtatttttgaaatcattaatattgactgagcatttagcaagttc
tgggaactctgcaggtgttaatccatttggttcttaaaatggtcacacac
acacacacacaaactggtaataaaattgcttagtttacatttgaagaagg
tgaggcaggaagaaatcagatgggctctctctggggttcttactctaacc
actgtgactgaactaataaggaaccatgttttagcaagaatgagaagttg
tcttctgagactactcaccaggaaaggaccattagatccactttttaaaa
gcgagtccacagatgacaggcaggtgtctacactaaggagaccaggttta
tactacacagatctgttgatctaagcaccatttttagaactatacagctg
gaagaaatgaaagacaaagtggaaggagacagaaatttcctgttcaaatt
gcctgtggtggctggttaaatctgcatgagtcataagctctgagataatg
aagtttaaaggcaaatggtggtgcccttagtcacgtaagccagaatctgg
gtgtctacatcccctctttgaccatcagacctatatattaaataaagtgc
aaggaaagacagaagaaggcaagcagttaggtaaataagagaagatcatc
taccttctgtcgttttaggtcccattgtaaggactaggaaagtagaaaac
agtactggacagtttatgtattcatttcattaaaatgcactactttacaa
atggtatcttgagtcttgacaggcagtatctttggctctggtgccattta
gacaggattcacctatttatcagggtccacaatttttccctctataatag
tattgcagtagcgggtgttcagtcatggtgcacaaagcaaaagagctgaa
agaaaactaacaggaaagactcatgttacatggcttttttgtctatctac
tatacttgtggttgctgtagcccctcatgacagtcttgcctttttcattt
cactttggccttggtccattgtgttgaattaaaccaagagttgcacttgc
catgtgtaccactctc
gaattctcactgaggaataccgaatggcagagaagcacctgaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcaggatgtggagaaagaggaacactcctccattgttggtggg
attgcaggcttgtacaaccactctggaaatcagtctggcggttcctcaga
aaattggacatagtactaccggaggatccagcaatacctctcctaggcat
atatccagaagatgtcccaaccggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagccagaagctggagagagcccagatgc
ctctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatcctgagtgaagtaacacgttcacaaagg
aactcacacaatatgtactcactgataagtggatattagcccaaaaccta
ggatacccaagatataagatacaatttgctaaacacatgaaactcaagaa
agaatgaagactgaagtgtggtcactatgcccctccttagaattgggaac
aaaacacccattgaaggagttacagagacaaaatttggagctgagacgaa
aggatggaccatctagagactgccatatccagggatccaccccataatca
gctttcaaaagctgacaccatttgcatacactagcaagattttgttgaaa
agacccagatgtagctgtctcttgtgaggctatgccagggcctagaaaca
cagaagtggatgctcacagtctgctattggatggatcaaagggctctcat
ggaggagctatagaagtactctaggagctaaagggatctgcaccctttag
tgggacaacattatgaactaactgtatctcggactcttgactctagccgc
atggtttcaaaagatggcctatcggcttcactgtaaagaggcctatggac
tcaaactgtattgctcatcttgggaagtccaggtctaaatatggtgaatt
ggggtgtggaggataggtatgtctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4625321_4626484
seq2: B6Ng01-069K16.b_47_1212

seq1  GAATTCTTCTTTTATTGTATACATTTTTTTCTATAACTCATACCCTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTTATTGTATACATTTTTTTCTATAACTCATACCCTGGGG  50

seq1  TTGTAATACCTGCACAAGTACAGAAAGTTGGTGATTAGCAAAAGGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATACCTGCACAAGTACAGAAAGTTGGTGATTAGCAAAAGGAAAAA  100

seq1  TTACGTGTATTTTTGAAATCATTAATATTGACTGAGCATTTAGCAAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTGTATTTTTGAAATCATTAATATTGACTGAGCATTTAGCAAGTTC  150

seq1  TGGGAACTCTGCAGGTGTTAATCCATTTGGTTCTTAAAATGGTCACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTCTGCAGGTGTTAATCCATTTGGTTCTTAAAATGGTCACACAC  200

seq1  ACACACACACAAACTGGTAATAAAATTGCTTAGTTTACATTTGAAGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAAACTGGTAATAAAATTGCTTAGTTTACATTTGAAGAAGG  250

seq1  TGAGGCAGGAAGAAATCAGATGGGCTCTCTCTGGGGTTCTTACTCTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGAAGAAATCAGATGGGCTCTCTCTGGGGTTCTTACTCTAACC  300

seq1  ACTGTGACTGAACTAATAAGGAACCATGTTTTAGCAAGAATGAGAAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGACTGAACTAATAAGGAACCATGTTTTAGCAAGAATGAGAAGTTG  350

seq1  TCTTCTGAGACTACTCACCAGGAAAGGACCATTAGATCCACTTTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGAGACTACTCACCAGGAAAGGACCATTAGATCCACTTTTTAAAA  400

seq1  GCGAGTCCACAGATGACAGGCAGGTGTCTACACTAAGGAGACCAGGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGTCCACAGATGACAGGCAGGTGTCTACACTAAGGAGACCAGGTTTA  450

seq1  TACTACACAGATCTGTTGATCTAAGCACCATTTTTAGAACTATACAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACACAGATCTGTTGATCTAAGCACCATTTTTAGAACTATACAGCTG  500

seq1  GAAGAAATGAAAGACAAAGTGGAAGGAGACAGAAATTTCCTGTTCAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATGAAAGACAAAGTGGAAGGAGACAGAAATTTCCTGTTCAAATT  550

seq1  GCCTGTGGTGGCTGGTTAAATCTGCATGAGTCATAAGCTCTGAGATAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGGTGGCTGGTTAAATCTGCATGAGTCATAAGCTCTGAGATAATG  600

seq1  AAGTTTAAAGGCAAATGGTGGTGCCCTTAGTCACGTAAGCCAGAATCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAAGGCAAATGGTGGTGCCCTTAGTCACGTAAGCCAGAATCTGG  650

seq1  GTGTCTACATCCCCTCTTTGACCATCAGACCTATATATTAAATAAAGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTACATCCCCTCTTTGACCATCAGACCTATATATTAAATAAAGTGC  700

seq1  AAGGAAAGACAGAAGAAGGCAAGCAGTTAGGTAAATAAGAGAAGATCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGACAGAAGAAGGCAAGCAGTTAGGTAAATAAGAGAAGATCATC  750

seq1  TACCTTCTGTCGTTTTAGGTCCCATTGTAAGGACTAGGAAAGTAGAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCTGTCGTTTTAGGTCCCATTGTAAGGACTAGGAAAGTAGAAAAC  800

seq1  AGTACTGGACAGTTTATGTATTCATTTCATTAAAATGCACTACTTTACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGGACAGTTTATGTATTCATTTCATTAAAATGCACTACTTTACAA  850

seq1  ATGGTATCTTGAGTCTTGACAGGCAGTATCTTTGGCTCTGGTGCCATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATCTTGAGTCTTGACAGGCAGTATCTTTGGCTCTGGTGCCATTTA  900

seq1  GACAGGATTCACCTATTTATCAGGGTCCACAATTTTTCCCTCTATAATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGATTCACCTATTTATCAGGGTCCACAATTTTTCCCTCTATAATAG  950

seq1  TATTGCAGTAGC-GGTGTTCAGTCATGGTGCACAAAGCAAAAAGAGCTGA  999
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  TATTGCAGTAGCGGGTGTTCAGTCATGGTGCACAAAGC-AAAAGAGCTGA  999

seq1  AAGAAAACTAACAGGAGAGACTCATGTAACATGGCTTTTCTGTCTATCTA  1049
      |||||||||||||||| |||||||||| ||||||||||| ||||||||||
seq2  AAGAAAACTAACAGGAAAGACTCATGTTACATGGCTTTTTTGTCTATCTA  1049

seq1  CTATTACTTGTGGTTGCTGTAG-CACTCATGACAGTC-TGCCTTTTTCAT  1097
      ||| |||||||||||||||||| | |||||||||||| ||||||||||||
seq2  CTA-TACTTGTGGTTGCTGTAGCCCCTCATGACAGTCTTGCCTTTTTCAT  1098

seq1  TTCAC-TTGGCCTTGTTCCAT--TGTTGATTAACACCAAGAGTCTGCAAC  1144
      ||||| ||||||||| |||||  |||||| | | ||||||||| ||| ||
seq2  TTCACTTTGGCCTTGGTCCATTGTGTTGAATTAAACCAAGAGT-TGC-AC  1146

seq1  CTGCCACTGTGTACCA-TCTC  1164
       ||||| ||||||||| ||||
seq2  TTGCCA-TGTGTACCACTCTC  1166