BAC Information

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BAC

Clone NameB6Ng01-070I01
Chromosome4 (Build37)
Map Location 32,162,464 - 32,289,462
singlet/doubletdoublet
Overlap geneLOC665228
Upstream geneLOC100040891, Map3k7, LOC665218
Downstream geneLOC665232, Bach2, Gja10, Casp8ap2, Mdn1, Lyrm2, Ankrd6, LOC665298, Rragd, 4933421O10Rik, Ube2j1, LOC100039142, Gabrr2, Gabrr1, Acy1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070I01.bB6Ng01-070I01.g
ACCDH888491DH888492
length1,1291,082
definitionDH888491|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I01, 5' end.DH888492|Mus musculus domesticus DNA, BAC clone: B6Ng01-070I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,288,322 - 32,289,462)(32,162,464 - 32,163,557)
sequence
gaattcttggtggttgaagtagagggcttgccttgctctgggaacatcac
tgaagtagagttctttgtgagcggatatgcatagatgcgtgatggttatg
ttaagggtcgactcagtaaaatctaacatctcctagcagtcaggcctctg
agtgtgcctgcaggggattgtcctgaccacacggatggtgttgggcaggc
tcagcctctgtgggaagcaccgttgcctgactggatcctgcacgggagga
actgagcaaccgtacagtacgcattcatccatctttgcttcctgtttgta
gacacaatataaccagtcacttgaagtgcctactgccaaggcgtcgctgc
caggaaaggctgtatttggcgccgtgagccagaataaaccctttctcctg
tcagttgatttttgtcagcatattttatcacacaaacagacaaagtaact
aaggcagacagcaacaacctggaatgtttaacccagaactttgatgaaga
tcaaaggagttgttgaaaagcttgaacttgcccttgatccaaagagagta
gactctgagggcgggcaggccaccctcttttgtaggaccacaggaggaga
gctaggtgtgcttatactgttctggtccagactgtttgtttacatggctg
tttggcttttttggtgcttccagaggcctggtctttgcttgccagtggct
cttctggagatggatgctgtgatccactgaattgtaactggaattatctt
agtgtgtagtagaaaaaccaccacgatatctcagatttttttttctcttg
gagattctctttttaaagctcttggttacctgagaggaagcttcatgccc
agggtatgaagagaattgctaacgaagcccggagatagacagggataagg
cacactagtaagtcagtgcttggtcacacaagagcacggattagtggtct
ctgggaagagctgtgtcttaaactcccaagggccccctccaagttgcctg
ggaagatgcgacttagccacaatcttatcctatctggggcactagcacca
gcgagtctgcctaagtgaatgcttgctatttcctgggtaagaacgcatat
cgtcaccgctgggtgttttgtgccctgag
gaattcacatctctttagttttccaaatatttcccacctgcagctgcttg
cccacggatgcggggcgcaacgttctctttagatcggaggcatagttccc
tgtagtatttcacaatggaacttttccaagagctggcgtgaggagaagag
aggccctataaacatcaccagtaagcaccagggttttggagtgagaaaag
tggagcaggagcaggggagattggtaacccgcggatagggtaaacagagg
caagtgttgacctagtggaaagaaatctgggaatacacccaggcatcaac
tcagctcagaaccccacttctagacccacataaagagaagtctgatggat
tcggctcttctcccctggagccagtcacttgctactaggacaggatcggg
atagagaaaattagcgcaactgctccgagcccagccctgccaggtggact
gggaagacccaggccagtcccatggaagaggctgagaagatctctgcctc
caggagtgctttggccactaggacccctacacacacacacacacacacac
acacacacacacacacacacacacacacacacacacacacatcaggccag
gtttgtaggaaggcatgctgctaattcctgctgctagtgcacatgagaga
agacagcaatggaactatttttctttgaaagaaacagaaatagaaatgag
attaggccagcagaatggctcaggtcatggaacctgacaacctgagaagg
aatttgcctcctacccactgggccagttctgcggctggtggaaacagaag
ccatgatggggtagggatcatgctgacggtatcaggcagagagggaggga
gcaaaggcaaggtcatagtcactggtcatggctaggagaagaatctgtat
gcctttggggctctctggagtcctttgatgggactgtcaaagacatctaa
gcctgtgaataaacaataggctctcagaaagtccgtcccagtctgtctgt
gccatataaaggacagacgctataggtactctcagcagacaggaagctgg
agtccttgtcacgttgatcatcagcttttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_32288322_32289462
seq2: B6Ng01-070I01.b_44_1172 (reverse)

seq1  CTCAGGCACCAAAACAACCCAAGCCGGTGACGATATGCGTTCCTTACCCC  50
      ||||||   |||||| |||||   ||||||||||||||||| ||||||| 
seq2  CTCAGGGCACAAAAC-ACCCA--GCGGTGACGATATGCGTT-CTTACCCA  46

seq1  AGGAATAGC-AGCATTCCACTTTAGGCAGGACTCTGCTTGGGTGCTAGTG  99
       | |||||| |||||| ||| ||||||| ||||| |||  ||||||||||
seq2  GGAAATAGCAAGCATT-CAC-TTAGGCA-GACTC-GCT--GGTGCTAGTG  90

seq1  CCCCAGATAGGATTAAGA-TGTGGCTAAGTCGCATCTTCCCAGGCAACTT  148
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  CCCCAGATAGGA-TAAGATTGTGGCTAAGTCGCATCTTCCCAGGCAACTT  139

seq1  GGAGGGGGCCCTTGGGAGTTTAAGACACAGCTCTTCCCAGAGACCCACTA  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGAGGGGGCCCTTGGGAGTTTAAGACACAGCTCTTCCCAGAGA-CCACTA  188

seq1  ATCCGTGCTCTTTGTTGTGACCAAGCACTGACTTACTAGTGTGCCTTATC  248
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  ATCCGTGCTCTT--GTGTGACCAAGCACTGACTTACTAGTGTGCCTTATC  236

seq1  CCTGTCTATCTCCGGGCTTCGTTAGCAATTCTCTTCATACCCTGGGCATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTATCTCCGGGCTTCGTTAGCAATTCTCTTCATACCCTGGGCATG  286

seq1  AAGCTTCCTCTCAGGTAACCAAGAGCTTTAAAAAGAGAATCTCCAAGAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCTCTCAGGTAACCAAGAGCTTTAAAAAGAGAATCTCCAAGAGA  336

seq1  AAAAAAAATCTGAGATATCGTGGTGGTTTTTCTACTACACACTAAGATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATCTGAGATATCGTGGTGGTTTTTCTACTACACACTAAGATAA  386

seq1  TTCCAGTTACAATTCAGTGGATCACAGCATCCATCTCCAGAAGAGCCACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTACAATTCAGTGGATCACAGCATCCATCTCCAGAAGAGCCACT  436

seq1  GGCAAGCAAAGACCAGGCCTCTGGAAGCACCAAAAAAGCCAAACAGCCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCAAAGACCAGGCCTCTGGAAGCACCAAAAAAGCCAAACAGCCAT  486

seq1  GTAAACAAACAGTCTGGACCAGAACAGTATAAGCACACCTAGCTCTCCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAACAGTCTGGACCAGAACAGTATAAGCACACCTAGCTCTCCTC  536

seq1  CTGTGGTCCTACAAAAGAGGGTGGCCTGCCCGCCCTCAGAGTCTACTCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCCTACAAAAGAGGGTGGCCTGCCCGCCCTCAGAGTCTACTCTC  586

seq1  TTTGGATCAAGGGCAAGTTCAAGCTTTTCAACAACTCCTTTGATCTTCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATCAAGGGCAAGTTCAAGCTTTTCAACAACTCCTTTGATCTTCAT  636

seq1  CAAAGTTCTGGGTTAAACATTCCAGGTTGTTGCTGTCTGCCTTAGTTACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCTGGGTTAAACATTCCAGGTTGTTGCTGTCTGCCTTAGTTACT  686

seq1  TTGTCTGTTTGTGTGATAAAATATGCTGACAAAAATCAACTGACAGGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTTTGTGTGATAAAATATGCTGACAAAAATCAACTGACAGGAGA  736

seq1  AAGGGTTTATTCTGGCTCACGGCGCCAAATACAGCCTTTCCTGGCAGCGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTTATTCTGGCTCACGGCGCCAAATACAGCCTTTCCTGGCAGCGA  786

seq1  CGCCTTGGCAGTAGGCACTTCAAGTGACTGGTTATATTGTGTCTACAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTGGCAGTAGGCACTTCAAGTGACTGGTTATATTGTGTCTACAAAC  836

seq1  AGGAAGCAAAGATGGATGAATGCGTACTGTACGGTTGCTCAGTTCCTCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAAAGATGGATGAATGCGTACTGTACGGTTGCTCAGTTCCTCCC  886

seq1  GTGCAGGATCCAGTCAGGCAACGGTGCTTCCCACAGAGGCTGAGCCTGCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGATCCAGTCAGGCAACGGTGCTTCCCACAGAGGCTGAGCCTGCC  936

seq1  CAACACCATCCGTGTGGTCAGGACAATCCCCTGCAGGCACACTCAGAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCATCCGTGTGGTCAGGACAATCCCCTGCAGGCACACTCAGAGGC  986

seq1  CTGACTGCTAGGAGATGTTAGATTTTACTGAGTCGACCCTTAACATAACC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCTAGGAGATGTTAGATTTTACTGAGTCGACCCTTAACATAACC  1036

seq1  ATCACGCATCTATGCATATCCGCTCACAAAGAACTCTACTTCAGTGATGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGCATCTATGCATATCCGCTCACAAAGAACTCTACTTCAGTGATGT  1086

seq1  TCCCAGAGCAAGGCAAGCCCTCTACTTCAACCACCAAGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGCAAGGCAAGCCCTCTACTTCAACCACCAAGAATTC  1129

seq1: chr4_32162464_32163557
seq2: B6Ng01-070I01.g_66_1147

seq1  GAATTCACATCTCTTTAGTTTTCCAAATATTTCCCACCTGCAGCTGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTCTTTAGTTTTCCAAATATTTCCCACCTGCAGCTGCTTG  50

seq1  CCCACGGATGCGGGGCGCAACGTTCTCTTTAGATCGGAGGCATAGTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGGATGCGGGGCGCAACGTTCTCTTTAGATCGGAGGCATAGTTCCC  100

seq1  TGTAGTATTTCACAATGGAACTTTTCCAAGAGCTGGCGTGAGGAGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATTTCACAATGGAACTTTTCCAAGAGCTGGCGTGAGGAGAAGAG  150

seq1  AGGCCCTATAAACATCACCAGTAAGCACCAGGGTTTTGGAGTGAGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTATAAACATCACCAGTAAGCACCAGGGTTTTGGAGTGAGAAAAG  200

seq1  TGGAGCAGGAGCAGGGGAGATTGGTAACCCGCGGATAGGGTAAACAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAGGAGCAGGGGAGATTGGTAACCCGCGGATAGGGTAAACAGAGG  250

seq1  CAAGTGTTGACCTAGTGGAAAGAAATCTGGGAATACACCCAGGCATCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTGACCTAGTGGAAAGAAATCTGGGAATACACCCAGGCATCAAC  300

seq1  TCAGCTCAGAACCCCACTTCTAGACCCACATAAAGAGAAGTCTGATGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCAGAACCCCACTTCTAGACCCACATAAAGAGAAGTCTGATGGAT  350

seq1  TCGGCTCTTCTCCCCTGGAGCCAGTCACTTGCTACTAGGACAGGATCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCTTCTCCCCTGGAGCCAGTCACTTGCTACTAGGACAGGATCGGG  400

seq1  ATAGAGAAAATTAGCGCAACTGCTCCGAGCCCAGCCCTGCCAGGTGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAAATTAGCGCAACTGCTCCGAGCCCAGCCCTGCCAGGTGGACT  450

seq1  GGGAAGACCCAGGCCAGTCCCATGGAAGAGGCTGAGAAGATCTCTGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGACCCAGGCCAGTCCCATGGAAGAGGCTGAGAAGATCTCTGCCTC  500

seq1  CAGGAGTGCTTTGGCCACTAGGACCCCTACACACACACACACACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTGCTTTGGCCACTAGGACCCCTACACACACACACACACACACAC  550

seq1  ACACACACACACACACACACACACACACACACACACACACATCAGGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACATCAGGCCAG  600

seq1  GTTTGTAGGAAGGCATGCTGCTAATTCCTGCTGCTAGTGCACATGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAGGAAGGCATGCTGCTAATTCCTGCTGCTAGTGCACATGAGAGA  650

seq1  AGACAGCAATGGAACTATTTTTCTTTGAAAGAAACAGAAATAGAAATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCAATGGAACTATTTTTCTTTGAAAGAAACAGAAATAGAAATGAG  700

seq1  ATTAGGCCAGCAGAATGGCTCAGGTCATGGAACCTGACAACCTGAGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCCAGCAGAATGGCTCAGGTCATGGAACCTGACAACCTGAGAAGG  750

seq1  AATTTGCCTCCTACCCACTGGGCCAGTTCTGCGGCTGGTGGAAACAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCCTCCTACCCACTGGGCCAGTTCTGCGGCTGGTGGAAACAGAAG  800

seq1  CCATGAT-GGGTAGGGATCATGCTGACGGTATCAGGCAGAGAGGGAGGGA  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGGGGTAGGGATCATGCTGACGGTATCAGGCAGAGAGGGAGGGA  850

seq1  GCAAAGGCAAGGTCATAGTCACTGGTCATGGCTAGGAGAAGAATCTGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGCAAGGTCATAGTCACTGGTCATGGCTAGGAGAAGAATCTGTAT  900

seq1  GCCTTTGGGGCTCTCTGGAGTCCTTTGATGGGGACTGTCAAAGACATCTA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCCTTTGGGGCTCTCTGGAGTCCTTTGAT-GGGACTGTCAAAGACATCTA  949

seq1  AGCCTGGTGAATAAACAAATAGGCTCTCAGAAAGTCCGTCCCAGTCTGTC  999
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  AGCCT-GTGAATAAAC-AATAGGCTCTCAGAAAGTCCGTCCCAGTCTGTC  997

seq1  TGTGCCAATATAAAGGAACCAGACGCTATAGGGTACTTCTCAGCAGACAG  1049
      |||||| ||||||||||  ||||||||||| ||||| |||||||||||| 
seq2  TGTGCC-ATATAAAGGA--CAGACGCTATA-GGTAC-TCTCAGCAGACA-  1041

seq1  GGAAGGCTGAGTCCCTTGGTCACGTTTGATCATCAGCTTTCTCTT  1094
      |||||   ||||||  | |||||| ||||||||||||||| ||||
seq2  GGAAGCTGGAGTCC--TTGTCACG-TTGATCATCAGCTTT-TCTT  1082