BAC Information

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BAC

Clone NameB6Ng01-070L24
Chromosome4 (Build37)
Map Location 75,027,466 - 75,028,691
singlet/doubletsinglet
Overlap genenone
Upstream geneJmjd2c, LOC100040258, LOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
Downstream geneLOC100039884, LOC667845, Ptprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070L24.bB6Ng01-070L24.g
ACCDH888652DH888653
length1,2271,150
definitionDH888652|Mus musculus domesticus DNA, BAC clone: B6Ng01-070L24, 5' end.DH888653|Mus musculus domesticus DNA, BAC clone: B6Ng01-070L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtgataaagccccaccgggattctggctatatcaaacattag
tgggaatcaactgacaggcaacctggtttttctgtgacatcattttctac
agtgatgttgtcactctgtcccattatgtctctgactattaacttatgag
gacattcagcattgccattggggacgagtagccttcttttcacatgctgc
ctttccttggcctttttcatgtctagatggtgttggcttttgaagataat
tgtatggttttccacttgcttaccacgtgcttgcaagaaagtatggtttc
aataattcgcttcttatttgcagtgattgcatcagaaaaaaaaatacaat
aaatcttaagattttgccaggctcattcatgataatggtgttatttcaga
gacataggtatggttgaatatatttaaataaatacattttatccatttat
atatacataggctttaagataaaaatatatgtccctctcagttggaaaaa
gaggccacagacaaaattcaatatttcatttggataaaagttatgaaaag
tctaggaagagatagaacatacttatacataataaaataagacaaacatc
gagctaaatagagaaacactcaaaatcttccctctaagatcagaaattaa
aacaacggagtcttctctctgtagccacattccatatagttcttggctac
ttcgattatccacaaaagaaagaaataaaaatgacacaaatagaagaagt
caaagtatcatatttgcagttgatacaccatgcataaaagattttaaaga
ttccataaaaaacttagagctaataaacatattcagtaatcactatgtaa
caaatttaatatataaacaagtagtctttctccacatctttgacaaatac
cctgagaaattaagcaagaaaacatccttattcaatacgaacacacacac
acacacacacacacacacacacacacgtaaaatatataaaaataaaagta
aatgagactgacagtgaaaactttaagtcatcaataaatgctctttataa
atgagaacatttcatatctttgattcttttaaaactacaaacagtcctag
cctgaatattattactgtcttttatttcaagagcataggcatagccagaa
ttcttttgtcatgggagccaagtgtccatggttactgaccaaagaaattt
tgatctactgcgagcaaggctcacaga
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaagcagtctggcggttcctca
tgaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatacagaagatgccccaaccggtaagaacgacatatgctccactat
gttcatagcagccttacttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactattcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaat
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggacctgagatga
aaggatggtccatgtagagacttccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctatcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atgagagctagagaagtagccaaggagctaaagggatctgcaccctatag
cgacacattatgactacagtactcgagctctgactctagctgcatatgta
tcaaagatgctagtcgtcatcactgaaggaagtcatgaccgcaactttat
tggctcagtacagttcgtcagaacaaaaggggagtggtgtgttatggaaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75027466_75028691
seq2: B6Ng01-070L24.b_46_1272

seq1  GAATTCTTGTGATAAAGCCCCACCGGGATTCTGGCTATATCAAACATTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGATAAAGCCCCACCGGGATTCTGGCTATATCAAACATTAG  50

seq1  TGGGAATCAACTGACAGGCAACCTGGTTTTTCTGTGACATCATTTTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATCAACTGACAGGCAACCTGGTTTTTCTGTGACATCATTTTCTAC  100

seq1  AGTGATGTTGTCACTCTGTCCCATTATGTCTCTGACTATTAACTTATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTTGTCACTCTGTCCCATTATGTCTCTGACTATTAACTTATGAG  150

seq1  GACATTCAGCATTGCCATTGGGGACGAGTAGCCTTCTTTTCACATGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCAGCATTGCCATTGGGGACGAGTAGCCTTCTTTTCACATGCTGC  200

seq1  CTTTCCTTGGCCTTTTTCATGTCTAGATGGTGTTGGCTTTTGAAGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTGGCCTTTTTCATGTCTAGATGGTGTTGGCTTTTGAAGATAAT  250

seq1  TGTATGGTTTTCCACTTGCTTACCACGTGCTTGCAAGAAAGTATGGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGTTTTCCACTTGCTTACCACGTGCTTGCAAGAAAGTATGGTTTC  300

seq1  AATAATTCGCTTCTTATTTGCAGTGATTGCATCAGAAAAAAAAATACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCGCTTCTTATTTGCAGTGATTGCATCAGAAAAAAAAATACAAT  350

seq1  AAATCTTAAGATTTTGCCAGGCTCATTCATGATAATGGTGTTATTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAAGATTTTGCCAGGCTCATTCATGATAATGGTGTTATTTCAGA  400

seq1  GACATAGGTATGGTTGAATATATTTAAATAAATACATTTTATCCATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGGTATGGTTGAATATATTTAAATAAATACATTTTATCCATTTAT  450

seq1  ATATACATAGGCTTTAAGATAAAAATATATGTCCCTCTCAGTTGGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATAGGCTTTAAGATAAAAATATATGTCCCTCTCAGTTGGAAAAA  500

seq1  GAGGCCACAGACAAAATTCAATATTTCATTTGGATAAAAGTTATGAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCACAGACAAAATTCAATATTTCATTTGGATAAAAGTTATGAAAAG  550

seq1  TCTAGGAAGAGATAGAACATACTTATACATAATAAAATAAGACAAACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAGAGATAGAACATACTTATACATAATAAAATAAGACAAACATC  600

seq1  GAGCTAAATAGAGAAACACTCAAAATCTTCCCTCTAAGATCAGAAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAATAGAGAAACACTCAAAATCTTCCCTCTAAGATCAGAAATTAA  650

seq1  AACAACGGAGTCTTCTCTCTGTAGCCACATTCCATATAGTTCTTGGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACGGAGTCTTCTCTCTGTAGCCACATTCCATATAGTTCTTGGCTAC  700

seq1  TTCGATTATCCACAAAAGAAAGAAATAAAAATGACACAAATAGAAGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATTATCCACAAAAGAAAGAAATAAAAATGACACAAATAGAAGAAGT  750

seq1  CAAAGTATCATATTTGCAGTTGATACACCATGCATAAAAGATTTTAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATCATATTTGCAGTTGATACACCATGCATAAAAGATTTTAAAGA  800

seq1  TTCCATAAAAAACTTAGAGCTAATAAACATATTCAGTAATCACTATGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAAAAAACTTAGAGCTAATAAACATATTCAGTAATCACTATGTAA  850

seq1  CAAATTTAATATATAAACAAGTAGTCTTTCTCCACATCTTTGACAAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTAATATATAAACAAGTAGTCTTTCTCCACATCTTTGACAAATAC  900

seq1  CCTGAGAAATTAAGCAAGAAAACATCCTTATTCAATACGAACACACACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAAATTAAGCAAGAAAACATCCTTATTCAATACGAACACACACAC  950

seq1  ACACACACACACACACACACACACACGTAAAATATATAAAAATAAAAGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACGTAAAATATATAAAAATAAAAGTA  1000

seq1  AATGAGACTGACAGTGAAAACTTTAAGTCATCAATAAATGCTCTTTATAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACTGACAGTGAAAACTTTAAGTCATCAATAAATGCTCTTTATAA  1050

seq1  ATGAGAACATTTCATATCTTTGATTCTTTTAAAACTAC-AACAGTCCTAG  1099
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGAGAACATTTCATATCTTTGATTCTTTTAAAACTACAAACAGTCCTAG  1100

seq1  CTTGAATA-TATTACTGTC-TTTATTTCAAGAGCATAGGCATAGCCAGTA  1147
      | |||||| |||||||||| |||||||||||||||||||||||||||| |
seq2  CCTGAATATTATTACTGTCTTTTATTTCAAGAGCATAGGCATAGCCAGAA  1150

seq1  TTC-TTTGTCATGGGAGCCAAGTG--CATGGGTTTACTGA-CAAAGAATA  1193
      ||| ||||||||||||||||||||  |||||  ||||||| |||||||  
seq2  TTCTTTTGTCATGGGAGCCAAGTGTCCATGG--TTACTGACCAAAGAAAT  1198

seq1  TTTGGGATCTAACTGCAGAGCAAGCTCCACAGA  1226
      |||  ||||| ||||| |||||||   ||||||
seq2  TTT--GATCT-ACTGC-GAGCAAGGCTCACAGA  1227